Halogeometricum borinquense: Hbor_12160
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Entry
Hbor_12160 CDS
T01359
Name
(GenBank) DNA-directed RNA polymerase, subunit F
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbor_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_12160
Enzymes [BR:
hbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbor_12160
Transcription machinery [BR:
hbo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbor_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF5748
Motif
Other DBs
NCBI-ProteinID:
ADQ66805
UniProt:
E4NR69
LinkDB
All DBs
Position
complement(1128490..1128846)
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AA seq
118 aa
AA seq
DB search
MTIFKEKVHEEYLTTSEVKELLEDVEAERAADEERELRYELARAIEHVNRFAFLDPEESV
ELVEDLLELEKVDEVTAFKIADLLPQSRDELRAVYAQERYALDGDELDEILNVVAKYA
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttcaaagagaaggtacacgaggagtatctcaccacgagtgaggtcaaagag
ctcctcgaagacgtcgaggccgaacgcgccgcggacgaagagcgtgaactccgctacgaa
ctcgctcgcgctatcgaacacgtgaaccgtttcgccttcctcgaccccgaggagtcggtc
gaactcgtcgaagacctcctcgaactagagaaggtggacgaggtgactgcgttcaaaatc
gcggacctgctcccgcagagtcgggacgaactccgcgccgtctacgcccaagagcgatat
gcgcttgacggcgacgaactcgacgagattctgaacgtcgtggcgaagtacgcctaa
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