Halomonas sp. TD01: HPTD01_3790
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Entry
HPTD01_3790 CDS
T08977
Name
(GenBank) RND efflux system, inner membrane transporter
KO
K18138
multidrug efflux pump
Organism
hbp
Halomonas sp. TD01
Pathway
hbp01501
beta-Lactam resistance
hbp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPTD01_3790
01503 Cationic antimicrobial peptide (CAMP) resistance
HPTD01_3790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbp02000
]
HPTD01_3790
01504 Antimicrobial resistance genes [BR:
hbp01504
]
HPTD01_3790
Transporters [BR:
hbp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HPTD01_3790
Antimicrobial resistance genes [BR:
hbp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HPTD01_3790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CAH1045312
UniProt:
A0AA35H067
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All DBs
Position
HaloTd01MainCirc:4084336..4087476
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AA seq
1046 aa
AA seq
DB search
MRLSDISVQRPVLAMVIAALIIAFGLLALNRLPLQEYPTVDPPIVSIDTRYPGASASVVE
TRITQVLEDRIAGVEGIELITSQSEDGRSRIEIEFSLSMNIDAAANDIRDRISGALRNLP
DDADNPEVTKADSSETIVIWLSLSGADYSITELTDYANRFLVDSLSVQPGVARVRVGGGR
DYAMRVWLDRNALAARGLTVGDIEEALRAENVELPAGSIESEDRQFIVRLPRSFATADDF
QQIALIEGSNGYLVRLGDVARVEIGSVEDRSVFRANGIPMVGLGMIMQSTANVVELSDAV
QQELKRLQGTLPEGMSLSLNYDASVFVSGAIEQVVMTLFIAMGLVVVVIFLFLGNLRTTL
VPAVTVPIAVIGAFTALAAMNFSINLLTLLALVLAIGLIVDDAIVVLENINRRMHDYGET
PLVAAFRGTRQIAFAVIATTLVLVAVFVPLSMLQGDIGRLFSEFALTMAAAVVVSTLLAL
TLTPMMASKILKPGMHDSRIGQGVQWLLSGTQRRYQSALEIVLTLKWLVVALFFLLIAAT
AWLATELPNEYTPQEDRGNFIVLVNGPEGATFDYMMDYMDEIEARLTPFVDSGELERIVV
RAPRGFGNIENFNSGFIIVNMADWGSRRSAWEIMAEVRQQLRTLPGVQAFPVMRQGFGQR
TQKPVQFVLGGGTYEDLARWRDTLVTHVRENNPRITAIESNYDETQPQLRVDINYERAAA
LGVTVTEIGRTLEVLLGGRNVTRYVDDGEEYDVILEGDRSGQKSPAALNNIQVRSARSGE
LIPLASLVALSDFAGASTLNRFDRVRAITIEANLADGYPLGEALEYLQQASDNVLPEEVQ
TNLAGPSRDFQQASGATMFLLVLGAVVVFLVLAAQFESLIHPFVIMLTVPLAMSGALLAL
LLSGQSLNIYSQVGLVLLIGLAAKNGILIVEFANQLRDEGQAFRSALVEAAVTRLRPILM
TAVTTMAGAIPLILSSGPGAESRLVIGTVIIAGVGSATMFTLFVVPVAYDLLARYSGSPG
AVKRQLEEEIASAPTAHHTPLNTPER
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttatccgacatttcagttcaacgcccggtgttagcgatggttattgcagcactg
attatcgcgtttggtttgctggcactgaaccgcctaccattacaagaatacccaacggtt
gatcctcccatcgttagtattgatacccgctatcctggcgcatcagcaagcgtggtagaa
acacgcattacccaagtgctggaagaccgtatcgccggggtagaaggaattgagttgatt
acatcgcaaagcgaagatggtcgttcgcgaattgaaatcgagttctccctttcgatgaat
atcgacgctgctgctaacgatatccgcgaccgtatctccggggcactgcgcaatcttcca
gacgatgccgataatccagaggtcactaaagccgacagtagtgaaactattgtgatatgg
ctaagcctctccggtgcggattactcgattaccgaactgaccgattacgccaaccgtttt
ctggttgacagcctctcagtgcagcctggcgtggcaagggtgcgtgtaggcggtgggcgt
gattacgcgatgcgggtttggttagaccgcaatgcactcgcagcacgagggttaaccgtc
ggcgatatcgaggaggcactgcgtgctgaaaatgttgagctgccagctggctcaattgag
tctgaggatcgccagtttatcgttcgtttgccgcgcagttttgcgaccgctgatgatttt
cagcagattgcattaattgaaggtagtaacggttatctggtgcgtctgggtgatgtcgcc
cgtgtcgaaataggctcggtagaagaccgctcggtgtttcgtgccaatgggattcccatg
gtggggctgggcatgataatgcaatcaaccgccaatgtggttgagctatcagatgctgtt
caacaggagcttaaacggcttcaaggtactctgccggaaggcatgtccctaagcctcaac
tatgacgcctcggtgtttgtttccggtgccatcgagcaggtagtgatgacgttgtttatc
gccatgggactggtcgtcgtggtgattttcttgtttttgggcaatctacgtacgacgctg
gtgcctgcagtgacagtccctatcgccgtcattggggcatttaccgccctagctgccatg
aacttttcgattaatctgcttacgctattggcgttggtgctggcaatagggctgattgtc
gatgacgcaattgtggtacttgagaacattaaccggcgtatgcacgactatggagaaaca
ccgctggtcgcagcatttcgaggcacacggcaaatcgccttcgcggtgattgccaccacg
ctggttctagtggcggttttcgtcccgctcagtatgctgcaaggcgatattggccggcta
ttttcagaattcgcacttaccatggcggcggcggttgttgtctcaacactcttagccctc
acccttacaccaatgatggcttctaagattctaaagccaggcatgcacgatagccgtatt
ggtcaaggcgtacagtggctgctgagtggcacccaacgccgttaccagagcgcattagaa
atcgtactaacgcttaaatggctggtcgtcgcactgtttttcttgttgatagccgctacc
gcttggctggcaaccgagctgcctaatgaatacaccccgcaagaagatcgtggcaatttc
attgtccttgtcaatggcccagaaggcgcaacgtttgactacatgatggactatatggac
gagatagaggcccggctgacaccttttgtagacagcggagagcttgaacgtattgtggtt
cgtgctccgcgcggtttcggtaatatcgaaaatttcaacagcggctttattatcgtcaac
atggccgattggggcagccggcgtagcgcctgggaaatcatggccgaggtgcgtcagcag
ttgcgcacgctaccgggtgttcaagcctttcccgttatgcggcagggctttgggcaacgc
acgcaaaagcctgtgcaattcgtactcgggggaggtacttacgaagatttagcgcgctgg
cgagatacgctggttactcacgttcgtgaaaataacccacgtattaccgctatcgaaagt
aattatgatgagacacagccccagctacgtgttgatatcaactatgaacgcgccgcggcg
ctaggcgtcactgtcacggagataggccggacgctagaagtgctgctaggtgggcgcaac
gtcactcgctatgtggatgatggtgaagagtacgatgtcatcctggaaggtgaccgcagc
ggtcaaaaaagccctgctgcgctaaataatattcaggttcgttcagcacgctcaggagaa
ctcattccactggcaagtctggtagccctgtctgacttcgctggtgccagcacgctgaac
cgctttgatcgcgttcgtgccattaccattgaagccaatctagccgatggttatcccctg
ggtgaggcgctggagtacttacaacaagcctccgacaacgtactgcctgaagaggtacaa
acgaaccttgctggaccttcacgcgatttccaacaggccagtggcgccactatgttctta
ttagtgctgggtgccgtggtggttttcctggtactcgctgctcagtttgaaagcctaatt
cacccatttgttattatgctgaccgtcccgttagccatgagtggcgcactgcttgcattg
ctgctaagcggacagtcgctcaatatctacagccaagtaggcttagtactgctgattggc
cttgcggctaaaaacggcattctgattgttgagtttgccaaccagctacgcgacgagggt
caggcgtttcgctctgccttggttgaagcggcggtgacacgcctgcggccgattctaatg
acagcagtcactacgatggcgggcgcgataccgctgatactatcaagcggcccaggagcg
gagtcacgactagtcatcggcaccgtcattatagcgggcgtcggttctgcgacgatgttt
accctgtttgtagtacccgtggcttatgacctgcttgcacgttactcaggctcgccaggg
gcagttaagcgccagctagaagaggaaatagccagcgcccctaccgctcaccatacgccg
ctgaatactcccgagcgttaa
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