Hevea brasiliensis (rubber tree): 110656738
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Entry
110656738 CDS
T05150
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110656738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110656738
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
110656738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110656738
NCBI-ProteinID:
XP_021669352
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MGVPAFYRWLVDRYPLAIVDVIEEEPKEDSNGVPIPVDVSKPNPNGMEFDNLYLDMNGII
HPCFHPEGKPAPPTYDDVFKSIFDYIDHLFLLVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFEAEGKLLFPKEKPETSDSNVITPGTQFMAVLSIALQYYIQ
MRLNQNPGWRYTKVILSDANVSGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIML
SLATHEIHFSILRELVTLPGQQEKCFICGQAGHLAAECRGKPGDDALDWVVVDDTPIHKK
KYQFLNIWVLREYLQYELDIPNPPFEINFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMHVYRKEFAVMNGYLTDAGEVNLDRVEHFIQSVAVYEEQIFQKRTRIQQALENNEE
MRLKARKEYSEESQALAVDKVKLGEPGYKERYYSEKFGISNPDEIDKFREDVVLKYVEGL
CWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPAASS
NALPEEYRKLMTDPSSPIHNFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLES
TLTDKERFRNSKMLDLLYVHPAHPLAAEIFSYHEVTRLLLPLQRCCWEIDTNASAGMNGY
LWLTERNVWRSMVPSPVSGLPDIEPNQVLNITYLNPINHRHVPEPPTGVVMPEKILKPID
IKPFPTLWHEDNGRRQQGRERPQVPRGIAGPLLGEAAHRLVKNTLNIRPNGSSSRYFEQP
PYRNIPGNPMFNRPRPAGPSGNERSYNYDPNYYYGHYGNQQGLMSNPRFSPISNGMPGNR
HNFKTQDRVQYPEQYHDIKSGISALTVEENVRSRPPVVILQRVPNTGSNSNMHHQVEQNI
GPLPSPPTKWIFRPAGDAETNFRQEKGASEKQMR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccagcgttctacaggtggcttgtagaccgttacccactagcaattgtggat
gtgattgaagaagaacctaaagaggacagcaatggcgtcccaatcccagttgacgtttca
aaacctaaccctaacggcatggagttcgataacttgtacttggatatgaatggtataatt
cacccctgttttcatccagaagggaagcctgcacctcctacttatgatgatgttttcaaa
tcgatatttgattacattgaccatcttttcttattggttcgaccgaggaagcttctatat
atggcaattgatggggttgcacctagagctaaaatgaatcagcaacggtctcggcgcttt
agagctgcaaaagatgctgctgaagctgaagccgaggaagaaagattgagaaaagaattt
gaggctgaggggaagcttttgtttccaaaagaaaagcctgaaacatccgactctaatgtc
atcactcctgggacccaatttatggctgtgctttcgattgcacttcaatattatatacag
atgaggttgaatcagaatccaggctggcggtatacaaaggttattctttctgatgcaaat
gtctctggtgagggagagcacaaaatcatgtcatacataagattacaaagaaaccttcct
ggtttcaatccaaacacacggcattgtctatatggtctggatgcagacttgattatgctg
tctttagcgacacatgaaattcacttttcaatattgagagagctagtcacacttcctggg
caacaggaaaagtgttttatttgtggtcaggccggccatcttgcagctgagtgtcgtggg
aagccaggagatgatgctttagattgggttgtggtagatgatactccaattcacaagaag
aaatatcagttcctcaacatctgggtgttgcgagaatatttgcagtatgaattggatatt
ccaaaccctccatttgagatcaactttgaacgtgtagtggatgattttgtatttctatgt
ttctttgttggcaatgactttcttccacatatgccaacattggaaattagggagggtgct
ataaatttattgatgcatgtgtacagaaaggagtttgctgtgatgaatggttatcttact
gatgcgggtgaggtaaatcttgacagagtagaacattttatccagtcagttgctgtttat
gaagagcagatctttcagaaaaggactcgtatacagcaggctttggagaataatgaagag
atgagactcaaagcaagaaaagagtactctgaagagtcgcaggcactggctgtagataag
gttaaattgggggagcctggttacaaagaaagatattactctgagaaatttggtatatca
aatccagatgaaatcgacaaatttagagaagatgtagttttgaagtatgtggaaggtttg
tgttgggtctgccgatattactaccaaggtgtttgctcttggcaatggttttatccatac
cattatgctccatttgcctctgatctcaaggatcttgctgacttagaaataactttcttt
ttgggagagccatttaaaccctttgatcagctaatgggaaccctacctgctgcaagttct
aatgcgttgcctgaagaatacaggaaattgatgactgacccatcatcaccaatacataac
ttctttccctcagattttgagattgacatgaatggtaaacgctttgcctggcagggtatt
gccaaattgccattcattgatgagaggaaattgcttgcccaaacaaagaaacttgaaagc
actttaacggacaaagaacggttccgtaatagtaaaatgctagatttgctgtatgttcat
cctgctcatcctttggcagcagaaatcttctcataccatgaagttacccgtttgttactt
ccattgcaaaggtgttgttgggaaattgacacaaatgccagtgctggcatgaatggctat
ctttggttaactgagaggaatgtctggagaagtatggtcccttcacctgtcagtgggttg
ccagacatagagcccaaccaagttttaaatattacatatcttaatcctataaatcataga
cacgtacctgaacctcccactggtgtggtcatgcctgaaaagatcttaaaacctatagat
attaaaccattccccacattatggcatgaagataatggtcgacgccagcaaggcagagaa
aggccacaagtacctagaggaatagctggccctctgttgggtgaagcagctcaccggctt
gtcaagaacacgcttaatatcagaccaaatgggtcatcttcgagatattttgagcaaccg
ccatatcgcaatatcccagggaatcctatgttcaacagacctagaccagctggaccctct
ggaaatgaaaggagctacaattatgacccaaactattattatgggcattacggtaaccaa
caaggcctaatgagcaatcctagattttctccaatatcaaatggcatgccaggcaatcgg
cacaactttaagactcaggacagagtacaataccctgaacagtaccatgatataaagagt
gggatatctgctttgactgtagaagaaaatgtcagaagcagaccgcctgtagtaatattg
cagcgcgtgccaaatacagggagtaattcaaatatgcaccaccaggttgagcagaacata
ggtccacttccatcacctcctaccaagtggatttttaggccagcaggagatgctgagact
aactttagacaagaaaagggtgcaagtgagaagcagatgcggtag
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