Hevea brasiliensis (rubber tree): 110669885
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Entry
110669885 CDS
T05150
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110669885
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
110669885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
DEAD
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
PRR20
zf-C2HC_2
RING_XB3-XBAT31
YhfH
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110669885
NCBI-ProteinID:
XP_021687419
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MELRSRKRIPKPSMNDNEQGERDCSSEADGNNSPHGCGSDVELYVLSSHSDDSSSSDECE
MIQDVEITHKKQKANTKIDVDIDDREGSFLDFMSSSNLHISDNPEPSTKISMTEIEFNNE
QQPAQPPRAARVKFIVEKGKRAYRSRRKRDKNRSGPPLMWEVWEEEHDKWIDEHLAEDVD
LDHQHGIVNETAEPPSELIMPLLRYQKEWLAWALKQEESETKGGILADEMGMGKTIQAIS
LVLAKREILWKTQESFGATLLPGSSVDLSGIKPTLVVCPVVAVSQWVSEIDRFTTKGSTK
VLVYHGANREKSFKKFSGYDFVVTTYSTVEAEFRKYMMPPKKKCAYCGKSFHENKLVIHL
RYFCGPDAIRTAKQSKQVRKKPKTVPSASMQKTESGKDKNRGFQDDVMKGAWKKKRKQHV
VDDDIEDMENSEVEQALRKEKSLLHSVKWDRIILDEAHYVKDRRSNTAKAIFALESLYKW
ALSGTPLQNRVGELYSLVRFLRIVPYSYYLCKDCDCRTLDYRSSAQCLSCPHSSVRHFCW
WNKYISNPIQAYGPHDIGKRAMILLKQKVLRNIVLRRTKKGRAADLALPPRMVMLRRDTL
DVKEEDYYQSSYNESQAQFNTYVRAGTVMNNYAHIFDLLTRLRQAVDHPYLVEYSKTAVQ
KEGNLVDAHNGEQDCGICHDPVEDPVVTACLHVFCKACLLDFSASLGQVSCPTCSKLLTV
DLTANSGGGDQIAKTTIKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGI
VFSQFTSFLDLISYSLHKSGVNCVQLVGSMSLPARDAAIKKFTEDPDCKIFLMSLKAGGV
ALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFIIENTIEERILQLQEKK
ELVFEGTVGGSSEALGKLTEADLRFLFVT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtaaaagaatccccaaaccctcgatgaatgacaatgagcaaggg
gaacgtgattgctctagtgaagctgatggcaataattcaccgcatggctgtggctctgat
gttgaattgtacgtgctgtcttcgcattctgatgatagcagctcaagtgatgaatgtgaa
atgattcaagatgtagagattacacacaaaaaacaaaaagcaaatactaaaattgatgtt
gacatagatgatcgggaaggtagttttctggattttatgagttctagtaatcttcatatt
tctgataatccggagccttctactaaaataagtatgacagaaattgagtttaataatgaa
caacaaccagctcaaccaccaagagcagctcgagttaaatttattgtagagaaagggaag
agagcatataggtcaagaaggaagcgggataaaaataggtcagggccaccgttgatgtgg
gaagtttgggaagaagaacatgataaatggattgatgaacacttagccgaagacgttgat
ttggatcatcaacatggtattgtgaatgaaacggctgaaccaccatcagagttgattatg
cctttgttacgataccaaaaggaatggttggcctgggctttgaagcaggaagagtcagag
accaaggggggaattcttgctgatgagatgggaatgggtaagaccattcaagcaatttcc
ttggtccttgccaaacgagaaattctctggaaaacccaggaatcctttggagccacactt
ttaccaggttcatctgttgatttgagtggaatcaaacccacccttgtagtctgtcctgtt
gtagcagtgagtcagtgggtaagtgagattgatcgatttactacaaaaggaagcaccaag
gtgctggtttatcatggagccaatagagagaagagttttaaaaagttctctggttatgat
tttgttgtaacaacctatagtactgttgaggctgaattcagaaaatacatgatgccgcct
aagaaaaagtgtgcctactgtgggaagtcattccatgaaaacaaacttgttattcacctg
agatatttttgtggtcctgatgccattagaactgcaaagcagtctaagcaagtcaggaag
aagcccaaaacggtaccatcagcttctatgcagaaaacagaatctggtaaagacaaaaat
cgtggatttcaggatgatgtgatgaagggagcttggaagaagaaaaggaaacagcatgtt
gtagatgatgatattgaggatatggagaactcggaagttgaacaagccttgcggaaagag
aaatcacttctgcactcggtgaagtgggatcgcattattttggatgaggctcattatgtg
aaagataggcgtagtaatactgcaaaagccatttttgctttagaatctttatataaatgg
gctctaagtggcactccccttcaaaatcgtgttggagaactttattctctggtacgcttc
ctgcgaatagtcccatactcatattacttgtgcaaggattgtgattgtcgaacccttgat
tataggtcatcagcacaatgcttaagctgcccccacagttctgtgagacatttttgttgg
tggaataaatacatttctaatccgatacaagcatatggacctcatgacattggaaaaaga
gctatgatattgctgaaacaaaaagttttgagaaacatagtgcttagacgtaccaaaaag
ggcagagctgctgaccttgctcttcctcctaggatggttatgttgaggcgtgatactctg
gatgttaaagaagaagattattatcagtcatcatacaatgaaagccaggcacaatttaat
acatatgttagggctggaactgtgatgaataactatgcacacatatttgaccttctaact
cgtttgcggcaggcagttgatcatccttaccttgtggaatattctaaaactgcggtacaa
aaagaaggaaacttggttgatgctcataatggtgagcaagactgtggcatttgccatgat
cctgttgaagatcctgttgtcactgcctgtctccacgtcttctgtaaggcttgtctgctt
gatttctctgcttccttgggacaagtctcctgccctacctgttctaaattacttactgtt
gatttgactgcaaattctggtggtggagatcagattgctaagacaaccattaagggtttt
aaatcctctagtattctcaacagaatacagctaaatgattttcagacaagcacaaagata
gaagctttgagggaagaaattagatttatggttgaaagggatggttctgcaaaaggaatt
gttttcagccagtttacttcattcttggatctcataagctactccctacataagtctggt
gtaaattgcgttcaattggtgggaagcatgtctttgcctgcaagagatgctgctatcaag
aaatttactgaggatccagattgcaagatattcttaatgagtttgaaagctggaggcgtt
gctctcaatctgacagtagcatcacatgttttcttgatggatccttggtggaacccagct
gtggagcggcaagcacaagatagaattcataggatagggcaatacaaaccaatcagaatt
gtgagatttattattgagaacaccattgaggagaggattttacagctgcaagaaaaaaag
gagctagtgtttgaagggactgttggtggctcgtcagaagccctgggaaaattaacagag
gcagatctgcggtttttatttgtcacttga
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