Halarcobacter bivalviorum: ABIV_1813
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Entry
ABIV_1813 CDS
T06437
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABIV_1813 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbv03400
]
ABIV_1813 (nth)
Enzymes [BR:
hbv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABIV_1813 (nth)
DNA repair and recombination proteins [BR:
hbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABIV_1813 (nth)
Prokaryotic type
ABIV_1813 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
CPSase_L_D3
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AXH12803
UniProt:
A0AAX2A6W5
LinkDB
All DBs
Position
complement(1822132..1822785)
Genome browser
AA seq
217 aa
AA seq
DB search
MANLKKATKEEIQIIKEAFAEKYAGAVTELEYKNDYELLIAIILSAQCTDKRVNIITPAL
FEKYPDVFSLAEASLDDVKELLKTCSFFNNKAKNIIKMAQSVIENYGGDIPHNQKELIKL
AGVGNKTANVFMIEFEGANLMAVDTHVFRVSHRLGLSYEKTVEKTEAELVKKLKDDLHIF
HQAMVLFGRYTCKALNPDCNSCLFPHVCKTTKSFKPQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacttaaaaaaagcaactaaagaagagatacaaataataaaagaggcttttgct
gaaaaatatgcaggtgctgtaacagagttagagtataaaaatgattatgaattattaatt
gcaattatcctttctgctcaatgtacagataaaagagtaaatattataacacctgcactt
tttgaaaaatatcctgatgttttttctcttgctgaggcttctttagatgatgtaaaagag
ttacttaaaacttgttcattttttaataataaagcaaaaaatattataaaaatggctcaa
agtgttattgaaaactatggaggagatatccctcacaatcaaaaagagcttatcaaacta
gcaggtgttggaaataaaactgcaaatgtatttatgattgaatttgagggggcaaattta
atggctgtagatactcatgtatttagagtttctcatagacttggactttcatatgaaaaa
acagttgaaaaaacagaagcagaattagtaaaaaaattaaaagatgatttacatattttt
catcaagcaatggttctttttggaagatatacttgtaaagctttaaacccagattgtaat
tcatgtcttttccctcatgtatgtaaaacaacaaaatcttttaaacctcaataa
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