KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_2041
Entry
HCBAA847_2041     CDS       T02494                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Pathway
hcb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HCBAA847_2041
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcb02044]
    HCBAA847_2041
Enzymes [BR:hcb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HCBAA847_2041
Secretion system [BR:hcb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HCBAA847_2041
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C DUF2834
Other DBs
NCBI-ProteinID: BAM33259
UniProt: I7HG60
LinkDB
Position
complement(1917250..1919697)
AA seq 815 aa
MQFLMSKRFYPLYFLLAVISVPATFLYCLHIFYAINDFWELIDFAELIIDNIGQRSMKFD
VYLAIGVSFFPPIFIFMFLKPKKSLDSHGKARWANQHDIEKSDFHLNKLIKDFFGLLNPL
NFTPQKYWKAFRKFLDFGFITTTPMLDTNFSRGGFLLGIYKDLWKQRKVYYDAPLSALIV
APPGAGKSAAVAIPNLLNLPTSCVVLDIKGELCDLTAGYRQKAFNNEIYIFNPLGKDNNL
KFNPFDNKIVKKLDFNAKKRLVDEIANTIFVEEQGSDPHWIAKARELFTFYALYDPRTKN
ESNFFDISTAPVTDYKPLIEEKSPYYSKLWDFNEKTQKRELNLDANPEKLFYSQCADQKY
ADVKNPLNWEDESFEQIQANKEKGIETLDEVVRNYARAWANAADEEFSSIKSTFNRVMSV
FASYQVRDATNAMSFEYDDLRSKNITLYIKIAQTDIDTLKSLIRVLLESIAKNLMTKESK
RLDERIYLVLDEFIRFGKMPFLLEMPALCRSYGIVPLYITQSYGLIKKYYGEDDLKTMTD
TIAFQILFKMNDADSAENVSKQIGKYTREARSHSTKDGAIAFGGTSSYSLEGTELITAQD
ILNIPNDEIIILVSGHKAKPIKIKAAYYFKEKDSLRKLNWKFDPTNGKPIEIENKQTQII
DMKETPQEAQPTPPNPQAIQNTQEPQQQAQESQEPQISEQEQQDIKQAQEEQALYEYEKA
LQEQEALKDKSQEDLQKEMQSLLEKQRKEYVYKIEDKDINAVLQAPLKKDSYIPKETFIN
IQKETYTLRENGYKLQITDELIRERIQRIENDKAE
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgcaatttctaatgagtaaaagattctatcccttatattttctattagcagttatcagt
gttcctgctacattcttatattgtttgcatattttctatgccattaatgatttttgggag
cttatagactttgcagaactcattattgataatattggacaacgcagtatgaagtttgat
gtttatctcgccattggagtatcattcttcccacctatctttatttttatgtttcttaaa
cccaaaaagagccttgattctcacggcaaagcaagatgggctaatcagcacgacatagaa
aaaagcgattttcatttaaataagcttatcaaagacttttttggcttactcaatccctta
aatttcacgccacaaaaatattggaaagcttttagaaaattcttagattttggatttata
acaaccacacctatgcttgatacaaactttagcaggggcggttttctcttaggtatttat
aaagacttatggaagcaaagaaaagtctattatgatgcccctctatcagcacttattgta
gcaccacccggagctggtaaatcagcagctgtggcaatacccaatctattgaatttaccc
acaagttgtgtggtgcttgatattaaaggagagctttgcgatctcacagctggttataga
caaaaggcgtttaataatgaaatatatatctttaacccactaggcaaggataataacctt
aaatttaatccttttgataataaaattgtaaaaaaactagattttaatgctaaaaaacgc
cttgtagatgagattgcaaacacaatatttgtagaagaacaaggcagcgatccccattgg
attgcaaaagcaagggagctttttacattctatgccctttatgatccccgcaccaaaaat
gaaagtaatttttttgatatttccacagcccctgttacagactataaacctctcatagaa
gaaaagtctccttattattcaaagctttgggattttaatgaaaaaactcaaaaaagagag
ttaaaccttgatgcaaatcctgaaaagcttttttactcgcaatgtgctgaccaaaaatat
gcagatgttaagaatcctttaaattgggaagatgaaagctttgagcaaatacaagccaac
aaagaaaaaggcattgaaacacttgatgaagttgtaagaaactatgcaagagcgtgggca
aatgccgctgatgaagagttttcaagtatcaaatctacatttaatcgtgtaatgagcgtg
tttgcaagttatcaagtaagagatgctacaaatgctatgagctttgaatatgatgactta
agaagcaagaacattacactctacattaaaattgcacaaactgatattgacacgcttaaa
tcgcttatccgtgtgcttttagaatctattgccaaaaacttaatgacaaaagaaagtaag
agattagatgagagaatctatctcgtgcttgatgagtttatacgctttggaaaaatgcca
tttttgttagaaatgccagctctttgcagaagctatggcattgtgccgctctatatcaca
caatcctatggattgattaaaaaatactacggcgaagatgatttaaaaacaatgactgac
accattgcctttcaaatcctttttaaaatgaatgatgcagattctgcggaaaatgtctca
aaacaaataggcaaatacacaagagaagcaagaagccatagcaccaaagatggagctatc
gcatttggaggcacaagcagctattcattagagggaacagagcttattaccgctcaagat
attttaaatatcccaaatgatgaaattattatccttgtatcagggcataaggcaaagccc
attaagattaaagctgcttattactttaaagaaaaagattccttaagaaagctaaattgg
aagtttgaccccacaaatggaaaacctattgaaatagaaaacaaacaaactcaaatcatt
gatatgaaagagacaccacaagaagcccaacctactccaccaaatccacaagcaatacaa
aacacacaagagccacaacaacaggctcaagaatcacaagaaccacaaatttcagagcag
gaacaacaagatataaaacaagcccaagaggaacaagccctctatgagtatgaaaaagcc
ctgcaagagcaagaagcattaaaagataaatcacaagaggatttgcaaaaagaaatgcaa
tctctcttagaaaagcaacgcaaggaatatgtctataagattgaagacaaagatattaat
gcagtcttacaagctccattgaaaaaagattcttatatccccaaagaaacttttatcaat
attcaaaaggaaacatataccctgcgagaaaatggctacaaacttcaaatcacagatgag
cttataagagaaagaatacaaaggattgagaatgataaagcagagtaa

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