Hemicordylus capensis (graceful crag lizard): 128322785
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Entry
128322785 CDS
T08891
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04514
Cell adhesion molecule (CAM) interaction
hcg04517
IgSF CAM signaling
hcg04520
Adherens junction
hcg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128322785 (PTPRF)
04517 IgSF CAM signaling
128322785 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128322785 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128322785 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128322785 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128322785 (PTPRF)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128322785 (PTPRF)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128322785 (PTPRF)
Cell adhesion molecules [BR:
hcg04515
]
Immunoglobulin superfamily
Type II RPTP family
128322785 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
FN3_DSCAM-DSCAML_C
Ig_3
Pur_ac_phosph_N
Fn3_ROS1
Fn3_VIN3
Ig_2
ig
Ig_VEGFR-1-like_5th
Fn3_PBP1
fn3_2
Tc-R-P
PTP-SAK
V-set
Interfer-bind
Ig_RIMBP2
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
fn3_SORL1
PTP-NADK
Fn3_PTPRU
Insulin_TMD
C1orf162
Egh16-like
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
128322785
NCBI-ProteinID:
XP_053100705
LinkDB
All DBs
Position
4:82005171..82764683
Genome browser
AA seq
1955 aa
AA seq
DB search
MVPNFSISVFVVPAVILSCLMSSTEADSKPNFMKTPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVLRDEAIYECMATNNVGEINTSAKLT
VLEENQLPSGFPAIDMGPQLKVVEKARTATLLCAASGNPDPEISWFKDFLPVDTATSNGR
IKQLRSGGTPIRGETQAERSGGKSGDSNFSFCSQCCFLGQMEMGSDSDKQTGALQIENSE
ESDQGKYECVATNSAGTRYSAPANLYVRVRRVSPRFSIPPSNHEVMPGGSVNLTCVAVGS
PMPYVKWIVGEVELTKEDDMPLGRNVLELINITKSANYTCEAMSSLGVIHATAQITVKAL
PKPPMEPLVTETTATSVTLTWDSGNADPISYYVIQYKPKSWEGTFQEVDGVATTRYSIGG
LSPFSEYEFRIIAVNNIGRSLPSELVEARTGEQAPSSPPLKVQARMLSASTMLVQWEQPE
EPNGLIRGYRVYYTTDPHQQLNMWQKHNTDDSHLTTVSSLIPVTTYSIRVLAFTSVGDGP
PSDVIQVKTQQGVPSQPADFQAEAESDTRIMLTWLPATQERITKYELFYWEGKDGVQHKV
EFDQVSSYAVEGLKPDTLYHFQLGARSELGLGVQTPVLEARTAQSTPSAPPQEVVCVSTS
STTIRVSWVPPPAQSRNGVITQYSIAYQAVEGEDSTKHVIEGIGHERSRWEINNLEKWTE
YKVWVRAHTDVGPGPESIPVWVRTDEDVPSAPPRKVEVEPVNSTTIRVSWKSPISNKQHG
QIRGYQVTYVRLENNEPLGPSVIKDVMVAESQLRSKDSIDHETLIGGLLPETTYSITVAA
YTTKGDGARSKPKMVTTTGAVPGKPTMMISTTSMNTALINWHPPKEMIGELLGYLLQYKR
ADEEKMKVIHFEKNADHHTVTDLYKGATYIFKLSAKNRAGPGEEFEKEITTTEEVPSGFP
QNLSVVGLTTSTTEVTWDPPILAERNGKITNYTVVYRDINSQQNLTKVTKEMSITLTNLK
PDTTYDIRVRAHTSKGAGPLSPSIQSRTMPMEQVFAKNFRVSAVMKTSVLLSWEVPDSYK
SEVPFKILYNGQTVEVDGHSMKKLINDLQPDTNYSFALTNRGSSAGALQHRVFIRTAPDV
LQSKPISTYKYIHNGRFALTLPKVQTSMPVRWYYIVVVPIDHTNNILASRWKSPDEMELD
QLLEAINQGGPDKRLRRQAEQLKPYIAAQVDDLPETFILGDKNTYKGFYNKPLSEDLSYR
CFVLASLEDGDTKKYAASPYSDEIVMEVSAKQQDEPEMLWVMGPVLAVILIIIIVIAILL
FKRKRANSPSAKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGASGPSCPNISSMRDHPPI
PVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRV
ILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVMMTRL
EEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQFQFM
AWPDHGVPEYPTPILAFLRRVKACNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERMKHEK
TVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVLARNLFAHIQKLSQVPP
GESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGS
DYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREVGREKCHQY
WPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTG
EGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVK
TLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttcagcatctcagtatttgttgtgccagcagtaattctgagctgcttg
atgtcatcaacggaggcagatagcaagccaaatttcatgaaaactcctgaggatcagatt
gggatttctggaggtgtagcctcctttgtatgccaagcgacaggagaaccaaagccccgc
atcacatggatgaagaaagggaagaaggtcagctcccagcgatttgaggttattgaattt
gatgatgggtctggatcggttctacgtattcagcctctgcgtgtccttcgagatgaagca
atctatgaatgcatggctaccaacaacgttggggagataaacaccagtgccaaactgaca
gtgttagaagagaaccagctcccatctggctttcctgccatagacatgggtccacagctc
aaggttgtggagaaggcccgcaccgccacattgctgtgtgctgccagtggcaatcctgac
cctgaaatctcctggttcaaagacttccttcctgtagacacagccactagcaatgggaga
atcaaacaactccgttcaggtggtacaccaatcagaggtgagacccaggctgaaaggtca
ggtgggaagagcggagacagcaatttcagcttctgttcacagtgctgttttctcgggcaa
atggaaatgggttcagactctgacaagcagacaggggccctgcaaattgagaacagcgaa
gagtcagaccaaggcaaatacgaatgtgtcgccacgaacagtgcagggacccgttattct
gctccagccaatctttacgtacgagtgcggcgagtgtcacctcgattctcaatcccacca
agcaaccatgaggtgatgcctggagggagtgtgaaccttacgtgtgttgcagtggggtcc
ccaatgccctatgtgaaatggattgttggagaggtggagctgacgaaagaagatgacatg
ccattgggtagaaatgttctggagctgatcaatatcacaaaatcagctaactacacctgt
gaagccatgtcctcactgggcgtaatccatgcaacagcacaaatcactgtcaaagccctg
ccaaagccaccaatggagccattagtgactgagacaacagccaccagtgtgactctcacc
tgggactcgggaaatgctgaccctatctcctactatgtcatccagtataagcccaagtca
tgggagggcactttccaggaagtagatggtgtagcaactactcgctacagcattggtggt
ctaagccccttctctgaatatgagttccgcattattgctgtcaataacattggcaggagc
ctccctagtgagctggttgaggcacggacaggagagcaagccccatcaagtccacccctc
aaagtgcaggcacgtatgctaagtgcaagcaccatgctggtacaatgggaacaacctgaa
gagcccaatgggctgatccgtggctatcgggtgtactacaccactgacccccaccaacaa
ctcaacatgtggcagaaacacaacactgatgatagtcacctcaccactgtgagcagcttg
atacctgtgaccacctatagtatccgtgtcttggcttttacctcagtaggagatgggccc
ccttctgacgtcatccaagtcaagacccagcagggtgttccatctcagccagctgacttc
caggctgaggcagagtctgacacacgaatcatgctgacatggctgccagccacccaggag
cgcatcaccaagtatgagctattttactgggaagggaaggatggggtccagcataaggtg
gagtttgaccaggtctcttcatacgcagttgaagggctcaagccagacacactctaccat
ttccaattgggagcccgttctgagcttggacttggagtccaaaccccagttttggaagcc
cggacagcacagtccaccccttctgccccaccccaagaggtcgtatgtgtaagcaccagc
tccaccaccatccgggtaagttgggtaccaccaccggctcagagccgcaatggagtcatc
acgcagtattccatcgcataccaggcggtggaaggagaggacagcaccaagcatgtgatt
gagggcattggacatgagcgctccagatgggagatcaacaacctggagaaatggactgag
tacaaagtgtgggtgagggctcacacagatgtgggtcctgggccagagagcatccctgtc
tgggttcgcactgatgaagacgtgcccagtgctccgccacggaaagtggaggtagagcca
gtgaactcaacaaccatccgtgtctcctggaaatcacccatctccaacaagcagcatggc
cagatccggggctaccaagtcacctatgtgaggctggagaacaacgagccacttggacca
tctgtcatcaaagatgtcatggtagcagagtcccagttgaggtctaaggactctattgat
cacgaaaccctaataggaggccttttacctgaaactacctactccatcaccgttgcagcc
tataccactaaaggggatggagcccgcagcaagcccaagatggttaccacaactggagca
gtcccaggcaagcctaccatgatgatcagcaccacatccatgaataccgccttaatcaat
tggcacccacccaaagagatgattggggagctcctgggatacttgctacagtacaaacgt
gctgatgaggagaagatgaaagtcattcactttgagaagaatgccgatcaccacaccgtg
accgacctttacaagggtgccacctacatcttcaagttatctgctaagaatagggctggt
cctggggaggagtttgagaaggaaatcaccaccaccgaggaggtgccaagtggcttcccc
cagaacctgagtgtggtgggactcaccacctccaccactgaagtgacctgggacccacca
atactggctgagcggaatgggaaaatcaccaattatacagttgtgtatagagatattaac
agccagcagaacctgaccaaagttactaaggagatgagcatcactctgaccaacctcaaa
cctgacacaacctatgacatcagagttagagctcacactagcaagggagctgggcctctc
agccccagcatccagtctaggacgatgccaatggaacaagtgtttgcaaagaacttccgt
gtcagtgctgtgatgaaaacatcagttctgcttagctgggaggtgccagactcttataaa
tctgaagtacctttcaagattctgtacaatggtcagactgtggaggtggatggccactcc
atgaagaagctgattaatgacctgcagccagacacaaattactcctttgcactcacgaac
cggggaagcagcgcaggagcactgcagcaccgggtcttcattcggacagcacctgatgtc
ctccagagcaaacccatttccacgtacaaatatatccacaacggacggttcgccctcacc
ctccccaaagtgcaaacctctatgccagtcaggtggtactacattgtggttgtgccaata
gaccacacaaacaacatccttgcatccagatggaagagcccagatgagatggaactggac
cagctacttgaggccattaaccaagggggtcctgacaagcgcctgcgccggcaggcagaa
caactcaagccctacattgctgcccaagtggatgatttgccagagaccttcatcttgggg
gacaagaacacctataaaggcttctacaataaacccctttcagaagacctgagctaccgt
tgttttgtgctggcttcgttggaggatggtgatacaaagaagtatgcagccagtccctac
tcagatgagattgtgatggaggtgtcagctaagcaacaggatgaaccagaaatgctatgg
gtgatggggcctgtcctggctgtcatcttaatcatcatcattgtcattgctatcttactc
ttcaaaaggaaaagggccaactccccctctgcaaaggatgaacattcaatcggcctgaag
gattctttgctggcccattcctctgacccggtggaaatgagacggctcaattaccaaaca
ccaggtgccagtggccccagttgcccgaatatctcaagcatgcgtgaccaccctcccatt
ccagtgacagacctcgctgacaacatcgaccggctgaaggcaaatgatgggctgaagttc
tcccaggaatatgagtccattgatcctggacagcaattcacctgggaaaactccaacctg
gaagtgaacaaaccaaagaaccgctatgcaaatgtgattgcctatgaccactcacgtgtc
atcctaacctccattgatggggtccctggaagtgactacatcaatgccaattacattgat
ggctaccgcaagcagaatgcgtatattgctacacagggtcctctaccagaaacactcagc
gacttttggaggatggtatgggaacaacgcacagcaactattgtcatgatgacccgactg
gaagagaagtctcgggtaaagtgtgaccagtattggccaggccgtggtacagaaacgtat
ggattgatccaggtgacattgctggacactgttgaacttgccacctatactgtccggaca
tttgccctatataagaatgggtccagtgaaaagcgggagttgcggcagttccagtttatg
gcttggccagaccatggggtaccagaataccccacccctatcctagccttcctgagacgg
gtgaaagcctgcaaccctcctgatgccgggccagtggttgtacactgcagtgctggtgtg
ggcaggacaggctgcttcatcgtaattgacgccatgctagagaggatgaagcatgagaag
acagtcgacatctatgggcatgtgacatgcatgcgttcacagagaaactatatggtgcaa
actgaggaccagtatatcttcatccatgaagccttgcttgaggcagccacctgtggaaac
accgaggtgcttgcacgcaacctctttgcccatatccagaagctgagtcaggtacctccg
ggcgagagtgtcacagcaatggaactggagttcaagctccttgccaactctaaagcacat
acctcacgattcatcagtgccaacctcccatgcaacaaattcaaaaaccgtctggtgaac
atcatgccctatgagctgacacgggtttgcctgcagccaatccggggtgtcgagggctca
gactacatcaatgccagcttcattgatggctacaggcagcagaaggcctacattgctaca
cagggacctctggctgaaaccacagaggatttctggcggatgctgtgggagcacaattcc
accattgtggtgatgcttacaaagttgcgagaagtgggacgagagaaatgtcatcagtac
tggcccgcagaacgctctgctcggtaccaatactttgtggtggatcccatggctgaatac
aacatgcctcagtacatcctgcgcgagttcaaggtcacagatgccagagatgggcaatca
agaaccatccggcagttccagttcacagactggcctgaacagggagtaccaaaaacagga
gaaggcttcattgacttcattgggcaagtccataaaaccaaggagcaatttggccaagat
gggcccatcactgtacactgcagcgcgggggtcggccgtactggtgtattcatcacatta
agcattgtactggagcgcatgcgctatgaaggtgtggttgacatgttccagaccgtgaag
accctgaggacacagcgaccagccatggtgcagacagaggaccagtatcagctgtgctac
cgggcagcactggagtaccttggcagctttgatcactatgcaacgtaa
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integrated database retrieval system
