Hemicordylus capensis (graceful crag lizard): 128324805
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Entry
128324805 CDS
T08891
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128324805 (OTOF)
Membrane trafficking [BR:
hcg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128324805 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
128324805
NCBI-ProteinID:
XP_053105815
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All DBs
Position
1:complement(456054124..456285626)
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AA seq
2081 aa
AA seq
DB search
MALSVHLKTVTDLRGKGERIAKVAFRGLSFYTRVLENCEDEAAFDETFRWPIASSIDVNE
MLEIQVFNYSKVFSNRLIGTFRMVLQKVVEEGQLQVTDTLIDDNNAAIRTSVTIEIRYQA
MDGTVGAWNDEEFLESPNARPEGDPFETDVLLSSHQQSPSKTSAAEKALRLRSKLSGFQT
KNHDGYKSIASDKVKGKEKKHLHLPFSKGKEKTHKAGKGVFSAMKLGKARPGKDDHHRKQ
DEPAVLEAEDLDRKAMRLGGALDPDTISLASVTAVTTNVSNKRSKPDIKMEPSAGRPMDY
QVSITIIEARQLVGLNMDPVVCVEVGDEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFD
KIVKLSVIHSKNLLRSGTLVGSFKMDVGTVYSQSEHQFYHKWAILSDPEDITAGLKGYLK
VDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGVPAERQWARFYLKIYRAEGLPRMNT
SLMANVKKALIGENKDLVDPYVQVVFAGQKGKTSVQKSSYEPFWNEQIVFTEMFPPLCKR
IKVQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQD
LNEGLGEGVSFRARLLLSLAVEILDTSNPEITSSTEVQLEQAMAVTDNCTGKMEEFFLFG
SFLEATMIDRKNGDKPINFEVTIGNYGNEIDGMSKPIIKRKKDGGDGNEEESELLQSVSD
EEDADDGEFISISTSAPMKPLITDRNYFHLPYFDKKPCIYIKSWWQDQRRRLYNANIMDK
IADKLEEGLNDVHEMIKTEKPHPERRLRGVLEELSSGCLRFVTIANKDQNHSSRTRLDRE
RLKSCMRELETMGQQAKSLRSQVKKTTIREKLKQAQNFLQKLRFLADEPQHSIPDIFIWM
MSNNKRIAYARIPSKDILYSIVDEEMGKDCAKVKTVFLKLPGKKGFGPAGWTVQAKMEIY
LWLGLNKQRRDFLSGLPCGFEERKLPKGQGVPSFPPISLLYNKKQVFQLRVHMYQARSLF
AADSSGLSDPFARVFFITQSQCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIV
IEIYDQDTVGKADFMGRTFAKPVVKMSDEEYCPPRFPPQLEYYQIYRGNSTAGDLLAAFE
LLQLPYDEEEIRRALLAATDPCVPQIQIGPAGKSDLPPIDGPTDMDRGPILPVPLGIRPV
LSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGRGVQSSLIQNYKKNPNFSTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVNSLRKFIYRPPDKKAQHWSTAAKLMN
AYAALANGGPYSHPTGEIVVNMEPEAPIKKMETMVKLEAHSDAVVKIDVSEEEKEKKKKK
KKKKGGEDIEEDEPDESMLDWWSKYFASIETMKEELRQQEAAAAEAEEKEEMDMAEEIRL
DDSPVKGSKGQGKTKEKVKAPKEDKKKKQQQQQQQQLPEAPEKKNKQKIDEMKVYPKELE
SDFDHFEDWLHTFNLLRGKIGDDDDNAADEDRIVGRFKGSMCVYKVPLPDDITKEAGYDP
NFGMFQGIPSNDPINVLVRIYVVRATDLHPADINGKADPYVVIKLGKTDIKDKENYISKQ
LNPIFGKSFDIEATFPMESMLTVAIYDWDLVGSDDLIGETKIDLENRYYSKHRATCGVAK
TYAIHGYNIWRDPQKPTQVLSKLCKEGKLDGPHYGPGGRVKVTNRVFMGPTEVEDENGQK
KQTDEHLALTVLHHWDEIPRVGCKLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMP
APGPAIDISPRKPKKYELRVIVWNTDEVVLEDDDYFTGEKSSDIFVRGWLKGQQEDKQDT
DVHYHSLTGEGNFNWRYIFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQVWDAD
HFSADDFLGGIELDLNRFPRGAKTAKQCTMELGTGEIELPMVSIFKQKRVKGWWPFLARD
ENDEMEMTGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIRY
FIWHTYRWLLLKVLLLALLLLMVGLFFYSMPGYLVKKLLGA
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagcgtccacctgaagaccgtcaccgacctccggggcaaaggcgagcgcatc
gccaaagtggccttccgaggtctctccttctacactcgagtgcttgagaactgtgaggat
gaagctgcatttgatgagacgttccgatggcccatcgccagcagcatcgatgtcaacgaa
atgttggaaatccaggtgttcaactacagcaaagtcttctccaacaggctcattgggaca
ttccggatggtcctgcagaaggtggtggaggaagggcagttgcaagtgacggatacctta
atagacgacaacaatgccgccatccggaccagtgtcaccattgagattcgataccaggcc
atggacggcacggttggggcttggaatgacgaggagttcttggagagtcccaatgcacgt
ccggagggcgacccctttgagacagatgtcctgctttccagccaccagcagtcccccagc
aagaccagcgcagcagagaaggctctccgcctccgcagcaaactctccggattccagact
aagaaccatgacgggtacaaatccatagccagtgataaagtgaaggggaaagagaaaaag
catctccatttgcccttcagcaaaggcaaagagaagacacacaaagctgggaaaggagtc
ttttcagccatgaagctgggcaaggctcgtcccgggaaagacgaccatcacaggaagcaa
gatgaaccagccgttctggaggcagaagacctggaccggaaagccatgcggctcggagga
gcactggacccagacaccatctccctggcctcagtcacagcggtcaccaccaatgtgtcc
aacaagagatcaaagccagatattaaaatggagcccagtgctgggagacccatggattac
caggtcagcatcacgataattgaggcacggcagctggtggggctgaacatggaccccgtg
gtgtgtgtggaggttggggatgagaagaagtacacatccatgaaagaatctaccaactgc
ccctactataatgagtactttgttttcgacttccacgtgcctcctgacgttatgttcgac
aaaatcgtcaagctatcggtcattcactccaagaacctgctgcgcagcgggaccctggtg
ggctctttcaagatggacgtaggcactgtgtacagccagtccgagcaccagttctaccac
aagtgggccatcttgtcagaccctgaggacatcacggctggcctgaaaggctacctgaaa
gtcgacatcgctgtggtgggcaaaggagacaacatcaagactccacacaaagcaaatgag
accgacgaagacgacatcgaggggaacttgctccttccagatggagttcccgcagaacgg
cagtgggcgcgcttctatctcaagatctaccgggcagaagggcttccacgcatgaacacc
agcctcatggccaacgtgaagaaggccctcattggggagaacaaggatctggtagaccct
tacgtccaggtggtctttgcaggacagaaggggaaaacgtctgtccagaagagcagctac
gaacccttttggaacgagcagattgtcttcacggaaatgttccccccactgtgcaagcgg
atcaaggtccagatccgtgactctgacaaggtcaacgacgtggccatcgggacccacttc
atcgacctgaggaagatctccaatgaaggagacaaaggtttcctgcccacgtttgggcct
gcctgggtgaacatgtacggctccacccgcaactacaccctcatggatgagcaccaggac
ctgaacgagggcctgggcgagggagtctccttccgtgcccgcctcctcctcagcctggct
gtggagatcttggacaccagcaaccccgagatcaccagttccaccgaagttcagctggag
caggccatggcggtcactgataactgcactggcaagatggaggagttctttctcttcggg
tccttcctggaagccaccatgatcgacagaaagaatggggacaaacctatcaactttgaa
gtcacaatcggcaattatggcaatgaaattgatgggatgtccaaacccatcatcaagagg
aagaaagatggtggggatggcaatgaggaagagtcagaacttctgcagagtgtgagtgac
gaggaagacgctgatgacggggagtttatctccatctccacttctgcaccaatgaagcct
ttgatcactgacaggaactatttccacttgccgtactttgacaagaagccatgcatctac
atcaagagctggtggcaggaccagaggcgccgcctctacaacgccaacatcatggacaag
attgcagacaagctggaagagggactgaatgatgtgcacgagatgatcaagacggagaag
ccccatcctgagcgacgtctccggggggtgctggaggagctgagcagcgggtgcctgcgc
tttgtgaccatcgccaacaaggaccagaaccactcctcccgcacacggctggaccgagag
agactgaaatcttgcatgagggagctggagacgatgggccaacaggccaagagcctgcga
tcccaggtgaagaaaaccactatccgagagaaactgaagcaggctcagaacttcctacaa
aagctgcggttcctggcagacgagccccaacacagcatccccgacatcttcatttggatg
atgagcaacaacaagcgcattgcctacgcccgcatcccctccaaggacatcctctattct
attgtggatgaagagatgggcaaagactgtgcaaaagtgaagaccgtcttcctgaagtta
cctgggaaaaaggggtttgggccagccggctggacagtgcaagccaagatggagatctac
ctgtggctgggactcaacaagcagcgccgggatttcctgagcggcctgccctgcggcttt
gaggagaggaagctgcccaagggccaaggcgtcccgtccttcccacccatcagcctcctc
tacaacaagaagcaggtcttccagctcagagtccacatgtaccaggccaggagcttgttt
gcagcagacagcagcggcctctctgaccccttcgcccgggttttcttcatcacgcaaagc
cagtgcaccgaggtcctcaacgagacgctttgccctacctgggaccagctgctggtgttc
gacaatgtggagctctatggggaagcccacgagatgcgggacgacccacccatcattgtc
attgagatctatgaccaggacacggtggggaaggctgatttcatgggccggacattcgcc
aagccagttgtgaagatgtcggatgaggaatactgccccccgcgcttcccgccccagctg
gagtactaccagatctaccggggcaactctactgccggcgacctcctggctgcctttgaa
ctgctgcagctcccatacgatgaggaggagatcaggcgagccttgctggcagccaccgat
ccttgcgtgccacagatccagattggcccggctgggaagtcagacctgcctcccattgat
ggccccacagacatggaccggggtcccatcctgccagtgcctctggggatacgccctgtg
ctaagcaaatacagggtggagatcctgttctggggactgcgagacctgaagcgcgtgaac
ctggcccaggtggatcggccgcgagtggatatcgaatgtgctgggaggggagtccagtcc
agcctcatccagaattacaagaagaaccctaatttcagcaccttggtcaagtggtttgaa
gtggatctgccggaaaatgagctccttcatcctcccctgaacatccgcgtggtggattgc
cgcgcctttgggcgctacaccctggtgggcagccatgcagtcaactccctgcgcaaattc
atctacaggcctccagataagaaagctcagcactggagcacagcagctaagctcatgaac
gcctatgcagccctggcaaatggaggcccctactctcaccccacaggtgaaattgtggtc
aacatggagccggaggctcccatcaagaagatggagaccatggtgaagcttgaagcgcat
tccgacgcagtcgtgaagatcgatgtgtcggaagaggagaaggagaaaaagaagaagaag
aagaagaagaaaggaggagaagacattgaggaggatgagcctgatgagagcatgctggat
tggtggtccaagtattttgcttccatcgagaccatgaaggaggaactccggcagcaggag
gcagccgcagcagaagcggaggagaaggaagaaatggacatggctgaggaaatcagactt
gatgactctcccgtgaaaggctccaagggccaagggaagaccaaggagaaggtcaaggcg
cccaaagaggacaagaagaagaagcagcagcagcagcaacagcaacagcttcccgaagct
cctgagaagaagaacaagcagaagatcgacgagatgaaggtgtaccccaaagagctggaa
tctgactttgaccacttcgaagactggctgcacaccttcaacctccttcgtgggaagatt
ggcgatgacgacgacaatgcggcagatgaggaccgcatcgtaggcaggttcaaaggctcc
atgtgtgtctacaaagtgccacttcccgatgacatcactaaggaagctgggtacgacccc
aatttcggcatgttccagggaatcccgagcaacgaccccatcaacgtgctggtccgcatc
tacgttgtcagggccactgatttgcaccccgctgatatcaatggcaaagctgacccttat
gtcgtcattaagctggggaagacggacatcaaggacaaggagaactacatctcaaagcag
ctgaacccaatctttggaaagtcatttgacattgaggccacattccccatggaatccatg
ctgacggtggcgatctacgactgggacttggtgggctctgatgatctgattggcgagacg
aagatcgacctggagaaccgatactacagcaagcacagggccacctgtggggtcgccaag
acctatgccatacacggctacaatatctggcgagaccctcaaaagcccacccaggtcctc
tccaagttgtgcaaagagggcaaactggacgggccccactatggccctggaggccgggtg
aaggttaccaaccgggtcttcatgggccccacggaagtggaggatgagaatggtcagaag
aagcagacggacgagcacctggcgctgacggtgctgcaccactgggacgagatcccccgt
gtgggctgcaagctcgtgcccgagcatgtggagacgcggcccttgctaaaccctgacaag
ccaggcattgaacagggacggctggagatgtgggtggacatgttccccatggacatgcca
gcaccaggccccgccattgacatttcgccaaggaagccaaagaaatacgagcttagagtg
atagtatggaacactgatgaggtagtcctggaggacgatgattacttcactggcgagaaa
tccagtgacatttttgtccgggggtggctgaaggggcagcaggaagacaagcaggacacg
gacgtccactaccactcgctgacgggcgaggggaacttcaactggcgctacatctttcct
ttcgactaccttgctgctgaggagaagatcgtgatctctaagaaagagtctatgttctcc
tgggacgagaccgagtacaagattccggcccgactcacgctacaggtgtgggatgctgac
cacttttccgccgacgacttccttggagggattgagctcgacctcaaccgctttccgcga
ggggcaaagacagccaagcagtgcaccatggagctgggcactggcgagatcgagctgccc
atggtctccatcttcaagcagaagagagtgaagggctggtggcccttcttggcacgagat
gagaacgatgagatggagatgacgggtaaggtggaggccgagctgcacctcctgacggcc
gaggaagctgagaaaagtccagccgggctggctcgtaacgagcccgacccattggagaaa
cccaaccgcccagacaccagcttcatctggttcctgaaccctctcaagtccatccgctac
tttatctggcacacctaccgctggctcctgctgaaagtcctcctcctcgctctcttgctc
cttatggtcggcctcttcttttactccatgcccggctacctggtcaagaagcttctgggg
gcctga
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integrated database retrieval system
