Hemicordylus capensis (graceful crag lizard): 128326984
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Entry
128326984 CDS
T08891
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04020
Calcium signaling pathway
hcg04260
Cardiac muscle contraction
hcg04261
Adrenergic signaling in cardiomyocytes
hcg04270
Vascular smooth muscle contraction
hcg04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128326984 (CACNA1C)
04020 Calcium signaling pathway
128326984 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128326984 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
128326984 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
128326984 (CACNA1C)
04270 Vascular smooth muscle contraction
128326984 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128326984 (CACNA1C)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128326984 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128326984
NCBI-ProteinID:
XP_053110944
LinkDB
All DBs
Position
5:237599633..238452236
Genome browser
AA seq
2197 aa
AA seq
DB search
MFQTIVRQATSAYRPLPAHLKGEPEVRHTGKMVHETQLSCFYIPPGGSNYASPRPAHANM
NANAAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGAAGNATISTASSTQRKRQQYGKQK
KQGTTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPED
DSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSA
ILEQATKADGVNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLH
IALLVLFVIIIYAIIGLELFMGKMHKTCYVSGSILTDPPAEEDPSPCAPDSSHGRQCQNG
TVCRAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLV
IFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDP
ENEDEGMDEEKPRNMSMPTSETESVNTDNVAGGDIEGENCGARLAHRISKSKFSRYWRRW
NRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYSQPDWLTEVQDTANKVLLALFTA
EMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFK
ITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTF
DNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFL
AIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQELEKPAVEGETKEEKIELKSI
TADGESPPSNKSNVDEYQPNENEEKNPYPATETQGEEEEEEPEMPVGPRPRPMSELHLKE
KAVPMPDASAFFIFSPSNRFRVHCHRIVNHNIFTNLILFFILLSSISLAAEDPVRYTSVR
NQILFYFDIFFTVIFTIEIALKILGNADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYF
NILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTI
GNIVIVTTLLQFMFACIGVQLFKGKLYSCTDSSKQTEAECQGNFITYKDGEVSQPMIQPR
SWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDSHMEDVGPIYNHRVEISIFFIIY
IIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQ
YKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCIFKEAMNILNMLFTGLFTVEMVLK
LIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSSSMTADENSRISITFFR
LFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALND
TTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPDKKCDLESVEPNNFPEGEHSCG
SSFAIFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEA
KGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRT
ALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYF
RKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVS
AASEDDIFRRAGGLFGNHVSYYQSDGRSSFPQTFTTQRPLHINKSSNNQGDTESPSHEKL
VDSTFTPSSYSSSGSNANINNANNTALSRFPSPQSYPSTVSTVEGHSTPLSPTARIQEAP
WKPGCRRTHYYEALGRSCSRHSQVAIVCEEETLQEEETYEEQLNEEVEYCNDPSLLSTEI
LSYQDDEHRQLTPPEDSKGEDTQPSPKRGFLRSTSLSRRASFHLECLKRQKNQSTEVPQK
TVLPLHLLHHQVLAVAGLSPLLHRSHSPLRSTRSCATPPATPCTQGWPQQPIKTLWLDGE
ESNEKLNSSFPSIHCSSLYSDATSSSSRRKARPVSLTVPSQTRECGRQFHGSANSLVEAV
LISEGLVQFAQDPKFIEVTTHELADACDLTIEEMENAADNILNSNSKPSPNGNLLPFVNC
RDPGQDCLGEEEEAVQNPDCRKNQEEPKDSRIYISSL
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaccattgttcggcaagcaacttctgcatatcgcccactccctgcacacctg
aaaggggagcctgaggtgaggcatactggcaaaatggtccatgaaacccagctgagctgc
ttctatattccacctggaggttctaactatgcgagtccccgtccagctcatgccaacatg
aatgccaatgcagctgcagggcttgcccctgagcatatccctactccaggtgcagccctc
tcctggcaggctgctatcgatgctgccaggcaggccaagctgatgggtgctgccggcaat
gcaacaatatccactgctagctccacgcagaggaaacggcagcagtacgggaaacagaaa
aaacagggtaccaccacagctacacggcctccccgggcactgctgtgtttaacactgaaa
aatcccatccggagagcatgcatcagtattgttgaatggaaaccatttgaaattattatt
ttactgactatttttgccaattgtgtggccttagctatctatatcccctttccagaagat
gattccaatgctaccaattccaatctggaacgagtggaatatctctttctcataattttt
acagtggaagcatttttaaaagtaatagcatatggacttctctttcatcctaacgcttac
ctccgcaatggctggaatttactagattttataattgtggtcgtagggctttttagtgca
attttagaacaagcaaccaaagcagatggggtaaattcaataggaggcaaaggtgccgga
tttgatgtgaaagcacttcgggctttccgagtactgcgtcccttacgactggtatctgga
gttcctagcctccaggtggttttaaattccattatcaaggccatggtccctttgctacac
attgccctgctggtgctgtttgtcataattatctatgccatcattggactggagcttttc
atgggaaagatgcacaagacttgttatgtaagtgggagcatcttaacagatccaccagca
gaagaggatccctcaccttgtgcccctgactcttcacacgggcgtcagtgtcagaatggc
acagtgtgcagagcaggatgggaggggcccaagcatggtattaccaacttcgacaacttt
gcctttgccatgttaactgtgtttcaatgcatcaccatggagggctggacagatgtgctg
tactggatgcaggacgctatgggctatgagttaccctgggtgtactttgtcagtctggtc
atctttggatcctttttcgttcttaatctggttcttggtgtattgagcggggagttttct
aaagaaagagagaaggcaaaagctcggggtgactttcaaaagttacgggagaaacagcaa
ctggaagaggacttgaagggatatctggactggataactcaagcagaagatattgaccca
gaaaatgaagatgaaggcatggatgaggagaagccccgaaacatgagcatgcccaccagt
gagacagaatctgtgaacaccgataatgtggcaggaggtgatattgaaggagaaaactgt
ggtgcacggctggcgcatcggatctcaaaatctaagtttagccgctactggcgcaggtgg
aatcggttctgcagacgaaaatgtcgagctgctgtcaagtccaatgtgttctactggctc
gtgatcttccttgtgtttctgaacactctcactattgcctctgaacattacagccagcct
gactggctcactgaagttcaagacactgccaataaggtactgctggctcttttcacggct
gagatgctgctgaagatgtacagcctgggtcttcaggcctactttgtatctctcttcaac
cgctttgactgtttcatcgtttgtggaggaatcctggagaccattttggtagaaaccaag
atcatgtcaccactgggtatctcagtgctgagatgtgtccgactactgagaatatttaaa
atcacaaggtattggaattccttgagtaatctggtggcttccctgctcaactcggtgcgc
tccatcgcctctctgctgcttctcctcttcctcttcatcatcatcttctccctcctaggg
atgcagctctttgggggcaagtttaactttgatgagatgcaaaccaggagaagcacattt
gacaactttccccagtcactcctcactgtgtttcagatcctgactggggaggactggaat
tcggtgatgtatgatgggatcatggcttatggcggcccctcttttccaggaatgttggtc
tgtatttacttcatcatcctcttcatctgtggaaactacatcttgctgaatgtgtttttg
gccattgctgtggacaaccttgctgatgctgagagcctgacatctgctcaaaaggaggag
gaagaggaaaaagaaaggaaaaaactagctagaactgctagtcctgaaaagaagcaggag
ctcgagaagccagctgtggagggggagacgaaggaggagaaaattgagctgaaatcgatc
actgctgatggagagtctcctccttctaacaagagcaatgtagatgaataccaacctaac
gaaaatgaagaaaagaatccctatcctgctacagaaacacaaggagaggaagaagaggaa
gagcctgagatgcctgttgggcctcgtccacgcccaatgtctgaattgcatctcaaggag
aaagcagtgccaatgccagatgccagtgcttttttcatcttcagccccagcaacaggttt
cgggtccactgccatcgcatcgttaatcataacatttttaccaacctgatcctctttttc
atcttgctcagcagtatctctctggcagctgaagatcctgtccgatacacctccgttagg
aatcaaattctcttttattttgatatattttttactgtcattttcaccattgaaattgct
ctgaagatcctaggcaatgcagattatgtcttcactagtatctttacattagaaattatt
cttaagatgactgcttatggggctttcctccacaaaggctccttctgcaggaactacttc
aacatcctggacctgctggtggttagcgtttccctcatctcctttgggatccagtctagt
gccatcaatgtagtgaagatactaagagtcctgcgagtgctgagaccactgagggccatc
aacagagccaaaggactaaagcatgtggtccaatgtgtgtttgtagccatccgaaccatt
gggaacattgtgatcgtcaccactttgttgcagttcatgtttgcctgcattggagttcag
ttgttcaagggcaaactgtacagctgcactgatagctccaagcaaacagaagcagaatgc
cagggcaattttatcacttacaaggatggagaggtctctcaaccaatgatccagcctcga
agctgggagaacagcaaatttgattttgacaatgtcctcactgccatgatggcccttttc
accgtttcaacctttgaaggctggccagaactgctgtaccgatccattgattcccatatg
gaagatgtggggcccatctataaccacagggtggagatctcaattttcttcattatctac
atcatcatcatcgctttcttcatgatgaacatcttcgttggtttcgtcatcgtcactttt
caggagcaaggagagcaggagtacaagaactgtgagctggacaagaaccagcgccagtgt
gtcgaatatgctctgaaggcccgccctctacggagatatatccctaaaaaccagtaccag
tacaaagtgtggtatgtggtgaactccacctattttgaatacctgatgtttgttctcatc
ctgctaaataccatctgcctggccatgcagcactatggtcagagctgcatctttaaagaa
gcaatgaacatcctcaacatgctgttcacaggcctcttcaccgttgagatggttctgaaa
ttaattgctttcaaacccaagcactatttctgtgatgcatggaatacatttgacgccttg
attgttgtgggtagcattgttgatatagcaatcaccgaggtgaacccagctgaacatacc
caatgttcttcctctatgaccgcagacgaaaactctcgcatctcaatcacctttttccga
ctcttccgtgtgatgcgtctggtgaagctcttgagccgaggggaaggcatccgcacgctg
ctgtggaccttcatcaagtccttccaggctctcccttatgtggctcttttaatagtgatg
ctctttttcatctatgctgtgatcgggatgcaggtgtttggtaaaattgccctgaatgat
accacagaaattaaccggaacaacaactttcagactttccctcaggcagtgctgttgctt
ttcaggtgtgcgactggtgaagcttggcaggaaatcatgctggcatgcctcccagataag
aagtgtgatctcgaatctgtggagccaaacaactttcctgaaggtgaacattcttgtggg
agcagcttcgccatcttttatttcatcagtttctacatgctttgtgcctttctaatcatc
aatctttttgtagctgttataatggataactttgattacctaacacgggactggtccatt
ctgggtcctcatcatctggatgagtttaaacggatctgggctgaatatgatcccgaagcc
aagggacgtatcaaacaccttgatgtggtgacactcctgcgtcggatacagcccccattg
ggttttgggaaactctgccctcacagggtggcttgcaaacgtcttgtctccatgaatatg
ccactgaatagtgatgggactgtcatgtttaatgctaccctgtttgcactcgtcagaaca
gcactgaggatcaaaaccgaaggtaacttggagcaagccaatgaggagctgcgtgcaatc
attaagaaaatctggaaacgtacaagcatgaaacttctggatcaggttgtgcccccagca
ggtgatgatgaggtaacagttggaaagttctatgccacattcctgatccaagagtatttc
cggaaattcaagaaacgcaaagaacaaggccttgttggtaaaccatcacagcggaatgct
ctctctcttcaggctggtctgcgcacattacatgacattggaccagagattcgacgggca
atctctggagacttgacagctgaagaagagttggacaaggctatgaaagaagctgtttct
gctgcctcagaagatgatattttcaggagagctggtggcttgtttggaaatcatgtcagc
tactaccaaagtgatggcagaagttcatttcctcagacatttactactcaacgccctttg
cacatcaacaaatctagcaacaaccagggagataccgaatccccatcccatgagaaactt
gtggattccacctttactccaagcagttactcatcatcaggctccaacgctaacatcaac
aatgccaacaacactgccttgagccgcttcccgagcccacaaagctaccccagcactgtc
agcactgtggaaggccacagcactcctttatcacccactgcacggatccaggaagcccct
tggaaacctggctgcagacggacacattactatgaagcattggggcgatcatgctccaga
catagccaagtggccattgtttgtgaggaggaaacattgcaggaggaggaaacttatgag
gagcaattgaatgaagaagttgagtactgtaatgatccaagtctattgtccactgaaatc
ctctcataccaagatgatgaacatagacaactaactccccctgaagacagtaaaggagaa
gatactcaaccctctccaaagcgcgggttcctgcgttccacatcactaagtcgaagagca
tcctttcacctagagtgtctaaagagacaaaaaaatcagagtacagaagtcccacagaag
acagtactacctttacatctgttacatcatcaggtgctagcagttgcaggtctgagtcct
ctccttcacagaagccattcaccattaagatccactcggtcatgtgctacaccccctgct
actccctgtacccagggttggccacagcagcctattaaaaccttgtggcttgatggagag
gagtccaatgagaaacttaatagtagcttcccatcaatacactgcagctccttatattct
gatgccaccagctctagcagcaggcggaaggccaggccagtgtccctcacagttccaagc
caaaccagagagtgtggcagacaatttcatggcagtgctaacagccttgttgaagcggtc
ttgatttctgaaggactggtgcagtttgctcaagatccaaagttcattgaggtcacgacc
cacgagctagctgatgcctgtgacttgacgatagaagagatggagaatgctgcagacaac
attctcaacagtaacagcaagccaagccccaatggcaacctcttgccttttgttaactgc
agggacccagggcaggactgtttgggagaggaagaggaggcagtccagaacccagattgt
agaaaaaatcaagaggagcctaaagacagcaggatttatatcagcagcctgtag
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integrated database retrieval system
