KEGG   Hemicordylus capensis (graceful crag lizard): 128328158
Entry
128328158         CDS       T08891                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04115  p53 signaling pathway
hcg04210  Apoptosis
hcg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    128328158 (APAF1)
   04115 p53 signaling pathway
    128328158 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128328158 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st APAF1_C Beta-prop_EML_2 WD40_CDC20-Fz NB-ARC Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML CARD WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_like Beta-prop_NWD2_C WD40_RFWD3 CARD_2 eIF2A Beta-prop_DCAF12 AAA_16 Beta-prop_Nup120_160 Hira Beta-prop_SPT8 ATPase_2 Beta-prop_IFT122_2nd B-prop_COPA_B_2nd DUF3173
Other DBs
NCBI-GeneID: 128328158
NCBI-ProteinID: XP_053113818
LinkDB
Position
5:207798431..207910792
AA seq 1331 aa
MDMKARSYLLQNREALERDIKTSYIMDHMIADEILTLQEEEKVKAQTVQRERAAMLIKII
LAKDNYAYISFYNALLHEGYKDLAALLQDGIPIISPHNGKSSMDGVTSYVKTVLCEGGVP
QRPVVFVTRSELAKRIQQKLYKLKSNPGWVVVYGMAGCGKSVLTAEALRDHNLLKANHYR
YVEDTKCGCPDFAIGVGFLGISRGYMSYGARRKYQKDTDSLQRRPILNGCQWVTTSYRHT
SALYFNFSISLLLDCFPGGVHWVSVGKQDKVGLLMKLQNLCLRLDQDFTYSQRPPLNIEE
AKDRLHLLMLRKYPRSLLVLDDIWDSWVLKAFDSYFQVLITSRDRSVTDSVMGNKYEVPI
ESGLTHDKALEILSRFVNMDIMELPENADSIVKECKGSPLVVSLIGALLRDFPNRWEYYL
RQLQNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYRDLSVLQKDVKVPSKVFCT
LWDMETEEAEDILQEFVNKSLLFCDRNGKSFHYYLHDLQLDFLTEKNRYQLQDLHKKVVH
QYKKHYKQSTPTPSQEDCMYWFNFLAYHMASARMHNELCALMFSLDWIKTKTELLGPAHL
IHEYVEYSEILDQKDTTVRENFQEFLSLNGHLLGRQPFPDIVQLGLCQSESSEVYRQAKL
QAQQELVKKSFYVEWINKKSMKSMYRLVVRPHTDAVYHACFSQDIQRIASCGADKTLQVF
KVESGEKLLEVKAHDDEVLCCAFSADDRFVATCSADKKVKVWNSRTGQLVHLFEEHTEQV
NCCQFSNTNHHPFLLATCSNDTFTKLWDLNKKYCRNTLFGHESSVTHCRFSPNDEYIASC
SADGTLKLWCVHSANELKTIDIGDFFRNEDEYQDDVEVLVKCCSWSSNGTSIIVAAKNKL
FLFDVKTSDLLAEILISHHSNIQYCDFCPNSQMVAVALSHYSVEIWNIESSYKIADCRGH
MSWIHSVAFSFDGSLFLTSSDDQTIRIWETSKVCKSFAVILKREIDVVFQSNEVIILAID
NLKRLQLINGYTGHAVYLTEAQETFICCCCLSEDLQTAAFGEENGTVKVLNLSSRNVLKS
RTGHRKAVQHCQFTSDGKTLVSSSDDSTIQVWKWQSDECILLKGHKESVKSFHVLGHPSL
LSWSFDGTVKFWNIVTGKLERDIICHEDAILSCAISPHAIMFSTASADKTAKIWSCENSS
ALHTLNGHEGCVRCCTFSLDNELLATGDDNGEIRVWNVSRGELLHRCSRASVDEGESAHG
GWVTDLCFSPDSKMLVSSGGYIKWWNTNTGQPLQTFYTNGTNLKSLHVSSNFKVCVTVDN
LGILYVLQIME
NT seq 3996 nt   +upstreamnt  +downstreamnt
atggatatgaaggctcgaagttacttgcttcagaatcgcgaagctttggaaagagatatc
aagacttcttatataatggatcatatgattgcggatgaaatattaacattacaggaagag
gagaaagtaaaagctcagactgtacagagagaacgagctgctatgctaataaaaatcatt
ctcgccaaagataattatgcatacatatccttttataatgctctgcttcatgaaggatac
aaagatcttgctgctcttctccaggatggcatccctattatttcccctcataatggaaag
agttctatggatggagtaacctcatatgttaagactgtcctctgtgaaggtggagttcca
cagcgacctgtagtgtttgtgactcgttcagaactagcaaaaagaattcagcagaaacta
tataagttaaaaagcaatccaggatgggtggttgtttatggaatggcaggctgtggaaaa
tctgttctgacagcagaagcactacgggaccacaatcttctgaaagcaaaccactacaga
tatgttgaggacaccaaatgcggatgccccgatttcgcaattggtgtcggattccttggc
atctcgagaggctacatgtcatatggggccagacgaaagtaccaaaaggacactgatagt
cttcagcgcaggcccattttgaatggatgtcaatgggtcactaccagttacaggcataca
tctgcactttatttcaatttcagcatatctttgttgttagattgcttccctggaggagta
cattgggtttctgttggcaaacaagacaaggtggggctgttaatgaaactccaaaatctt
tgtttgagactagaccaggacttcacttactcacagaggccaccacttaatatagaggaa
gctaaagatcgtcttcatttgctgatgttacgcaaatacccaaggtctctgttggtgctt
gatgatatttgggattcctgggttttaaaagcatttgatagttattttcaagttcttatc
accagtagggacagaagtgtgactgactctgtgatgggcaataaatatgaagttcctata
gaaagtggactaacgcatgataaggcacttgaaatattatctcgatttgtcaatatggat
ataatggagctgccagaaaatgctgatagtattgtaaaagagtgtaaaggttctcctctt
gtggtgtctttgataggagcattattacgagactttcccaatcgctgggaatactacctt
agacaacttcagaacaaacagttcaaaagaataaggaaatcatcatcttatgattatgaa
gcacttgatgaagcaatgtctataagtgttgaaatgttgcgagaagatattaaagactat
tacagagacctttctgtacttcaaaaggatgttaaagtgccttcaaaggtgttctgtact
ctttgggatatggagactgaagaagctgaagacatactgcaagaatttgttaacaaatct
ctcttgttttgtgatcggaatgggaaatcattccattattatttgcatgatcttcagctt
gattttcttactgagaagaatcgctatcagcttcaggatctccataaaaaggtagttcat
cagtacaagaaacattataaacagtctacacctactccatcacaagaggactgcatgtac
tggtttaattttctggcataccatatggcaagtgccagaatgcacaatgaactctgtgca
cttatgttttctctagactggattaagaccaaaacagaattgctggggcctgctcattta
attcatgaatacgttgaatacagtgaaatattggatcaaaaggataccactgtacgtgaa
aacttccaggaatttctgtctttaaacggacacctccttggacggcagccatttccagac
attgtacagctaggactgtgtcagtcagaaagctcagaagtgtatcgacaagcgaaacta
caagctcaacaagaacttgttaagaaatccttttatgtggaatggataaataaaaaatcc
atgaagagcatgtaccgtttggttgtgcgtccacatacagatgcagtttaccatgcatgt
ttttcccaggatatacaaagaatagcttcatgtggagctgataaaacactgcaggtattt
aaagttgaaagtggagaaaaacttctggaagtaaaagctcatgacgacgaagtgctgtgt
tgcgctttctcagcagatgacagatttgttgccacttgttctgcagataaaaaagtgaaa
gtctggaattcaagaacaggtcagcttgtgcatttatttgaggaacatacagaacaggtc
aactgttgtcagttcagcaatacaaatcaccatccgtttctgttagctacctgttcaaat
gacacttttaccaaactttgggatttgaacaagaaatactgtcgcaatacactgtttggc
cacgaaagttctgtaacccattgcagattttcacccaacgatgagtatatagcaagttgt
tcagcagatggaactttaaagctttggtgtgtgcattcagcaaatgaactgaaaactatt
gacataggagacttcttcagaaatgaggatgaataccaagatgatgtggaagtgttagtg
aagtgttgctcctggtcatcaaatggtacttcaataattgtggcagcgaaaaacaagctt
tttctttttgatgttaagaccagtgatctgttggcagagatccttataagtcaccacagc
aatattcaatactgtgacttttgtcccaacagccagatggtagcagttgctttatcacat
tattctgttgagatatggaatattgaatcttcttacaaaatagctgattgccgaggacat
atgagttggatacattcagtggcattttcttttgatggatctttatttctgacatcttct
gatgaccagacaataaggatttgggagacaagtaaagtgtgcaagtcctttgctgttata
ttaaaacgtgaaatagatgtggtgtttcagagtaatgaagtgatcatcttagccattgac
aatttgaagcgtctgcagctcattaatggatacactggccatgctgtgtatctgactgaa
gcacaggagactttcatttgttgctgttgtctaagtgaagatctgcagactgctgctttt
ggagaggaaaatggaacagtaaaggtattaaacctgtcaagtaggaatgttttaaaatcc
agaactggacatagaaaagctgtacaacactgccagtttacttctgatgggaagaccctt
gtttcaagttctgatgactcaactatacaggtatggaaatggcagtcagatgaatgcatt
ctcctgaaaggccacaaggaatctgtcaagagttttcatgttctaggacacccgagtctt
ctttcatggtcatttgatgggacagttaagttttggaatatagttactggaaaattggag
agagacattatatgccatgaagatgctattctttcttgtgctatttcaccacatgccatt
atgttttccactgcctctgctgacaagactgccaagatttggagttgtgaaaattcatct
gctcttcatacgctgaatggtcatgaaggctgtgtgaggtgctgcactttctcccttgat
aatgaattgttggccacaggagatgacaatggagaaataagggtttggaatgtctcaaga
ggtgagctgcttcaccgatgttcccgtgcttcagtagatgaaggagaatcagcacatgga
ggctgggtaactgacctttgcttttctcctgacagtaagatgcttgtttcttccggaggt
tacataaagtggtggaatacgaatactggtcaacccctacaaacattctatacaaatgga
acaaatcttaaatcattacatgtgtcttcaaatttcaaagtatgtgtgactgttgataat
cttggcattctctatgtgctacagattatggaataa

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