Hemicordylus capensis (graceful crag lizard): 128329255
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Entry
128329255 CDS
T08891
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03440
Homologous recombination
hcg03460
Fanconi anemia pathway
hcg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128329255 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
128329255 (BRCA1)
03460 Fanconi anemia pathway
128329255 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128329255 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128329255 (BRCA1)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128329255 (BRCA1)
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128329255 (BRCA1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128329255 (BRCA1)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128329255 (BRCA1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128329255 (BRCA1)
Multi subunit type E3
BRCC complex
128329255 (BRCA1)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128329255 (BRCA1)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128329255 (BRCA1)
BRCA1-A complex
128329255 (BRCA1)
BRCA1-B complex
128329255 (BRCA1)
BRCA1-C complex
128329255 (BRCA1)
BRCA complex
128329255 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
128329255 (BRCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-Nse
RING_XB3-XBAT31
RTT107_BRCT_5
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128329255
NCBI-ProteinID:
XP_053116074
LinkDB
All DBs
Position
6:complement(56877749..56957998)
Genome browser
AA seq
1758 aa
AA seq
DB search
MMAEARVFRPSAMPTQGIKGAMESLSPRIAEVHGMLLAMLKNLECPICLEVIKEPVSTNC
AHIFCRFCTVKLFKQKKGVTQCPLCNAKVTKRSLQEDVRFKQVIEGVLETVHAFERDTGL
KFADDQCFPKKAIATASASVPQKEQPFIDSKGYRNRLKNVKGKKKGNTSLGENSNLPPGN
GIVTRHSLRNKRNSNKAISLEIGSDSSEDLFKKAHTVRCVDFESDSGSQDDGCTKKQSPS
LCHIKLTEPSAEDVAPLDILGACGFLEEGLGSTEGTQENTGNVEVEENGAVEKSQSLFVP
DPFTKEHDSKSYSRSVQEDEATKTTTDKRTSNNVETVGIVLPAGIAQTCAILSEVEQQQL
QTQASPDIPLSQVSGKKLRQSIQKVNEWLSKSKKSAHTEEVAQDLDPRLLNVDSPSSQKD
KRIEEEELTICDGDRLLSKPISSKIEDKIFGKTYKRERKSTPRWNEKKAIQISTEEGTAV
NIKSCDTPVRKTLMRKRKASSELTPEDFIRRQDVKASIKRPGEDEDPNLEEGGQGYLANK
SPVPEEKEAEFPAEPVKKGVSILKADTSNSAHLRTPKKRTNSLSKRNRQLVGPVAALQSV
MDRSSRSPGKDEMQIDSYPSSEEPKEEGPGQKQIRRSRRLQVLTEEAQRGDRRLQLHTEG
TWREREPAKRGKKQVEERERKQSGSQVGNISSSPSVADDDPTILQGRLQEHMPWLGANLM
GMEDAADKVCTNPTTSPSVLGVVKGTPTVEQTAEDKQQSPPCIVPNDSQGSCSLLQLHSR
KVRQKTFEDKQFKAVPQSEKSASCAQELKSDGFCTRDMTESYKVPKTGGKAGALELNPET
DDSELETGFMRKIFSRCKRQSFLLHPSPMKESAAEIQREPSTDCVQDSKSDCVRKSVQDV
DRIYEERGQALTCEVTKGISVQSLSSCTSSFPEHESRTEHFQVALQAPSPDHPSIPVRSA
SKRAEGRNQLQSINPGSEKEAPPEMGETANMDGSSRSPSLSPINEINSYTDCFQGIGPEG
AENKRLALSSQPELVQLCPEACQQPRPEFSSVHTGGESSTMEQKQLKSSIEQAIEISSPG
IPRCLASGDNLEQSTEREFHSFPLLSETPKGSLGPGNEGKKSPSNFGEMGKKGILAVFAK
TDEETPHKRDLNSSNGSKSKCKGLVRACRRLVRKLSSSEEESSSEDEELPCFQALIFDQS
ASTPLQAMKEKEKSAEILAASRRSHLKPKDKEASLSQESGYSVNLFSSQSHASEDDPSKF
HDSGPRIPASTGNLTSSSMSKKASQTKDKVSRDAGQLKDGCQEHMNAELNLGEETMDYDS
EASHMWDSSGLSSQSETLTTQQRDAMQNNLKELQQKMAILEAVLQETQSDDSKELPLPCD
KSRKDQKGGVASLVEANSENWKTSNSKESLSELPATPEYPINSKYMDPVVQQCQNAHESG
STAKLRPRSKQRLTDALPPARSVHSTPGRYSTSISKSEEHTLSCLATRGSPAAAQDTDQS
SATRHKAQGRPHSSLAPITHCSSGKANPKSSLFTITRNMSLVASGLKQGELRLVQKFARK
TESAWSNKVTEETTHVVMKTDEDLVCERTLKYFLGIAARKWVVSYQWIVQSLKEGRVLDE
EEFEVRGDVINGRSHQGPKRARESHAGKLFQGLEICCYGPFTDLLPEQLEWMVELCGASL
VKQPHLFACATIWPLRCCLLLSLLLLYCLHHIVYPFVESSFPPQLLICLEDCSKVKNSPP
CYYLCLQTAEEIDPVQLS
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaggccagagtgttccgcccgtcagctatgccaacccagggtataaaggga
gctatggagtcccttagtccaagaattgctgaggttcatggaatgctgctagctatgctg
aagaacttggaatgcccaatatgtctggaggtgataaaggagccagtctcaacaaattgt
gcccacatcttctgcaggttctgtacagttaagctcttcaaacagaagaaaggtgtaaca
cagtgtcccctgtgcaatgccaaagtcaccaaaaggagtctacaggaagacgtccgattt
aaacaagtaattgaaggggtgctggaaaccgtccatgcttttgagcgtgatacagggctt
aagtttgcagatgatcagtgttttcctaagaaagctatagctactgcttccgcttcagtc
ccacagaaagaacagccctttattgacagtaaaggctacaggaacagactgaaaaatgtg
aaggggaaaaagaagggaaatacttccttgggggagaactccaacttgccaccaggcaat
ggaattgtcacaagacactctctgaggaataaaagaaactccaataaagccatctccttg
gaaattggatctgactcatctgaagatctctttaagaaggcacatacggtcagatgtgtg
gattttgaaagcgattctggttctcaagatgatggatgtaccaagaagcaaagcccaagc
ctgtgtcatataaagctcactgagccaagcgctgaagatgtggcaccattagatatccta
ggtgcatgtggtttcttggaggaaggactaggaagcacagaaggcactcaagaaaacact
ggaaatgtagaagttgaggaaaatggggctgtggagaagagccagagtttatttgttcca
gatcccttcacaaaggagcatgacagcaaatcttattccagatctgtacaggaggatgaa
gccacaaagaccaccacagacaaaaggacaagtaataatgtagaaacagttggcattgtg
ctgcctgctggaattgcacaaacctgtgccatcctgtctgaagttgagcaacagcagctg
cagacccaggcttcacctgatattcctttaagtcaagtctctgggaagaaactgaggcag
agcatccagaaagtgaatgagtggctttctaaaagcaagaagagtgctcacactgaggag
gtggctcaagatctggatccacgcttgttgaatgtagactcacctagctcacagaaggac
aaacggatagaagaagaggaattgacaatatgtgatggtgacaggcttttgtccaaacca
atttcctctaaaattgaagataaaatatttgggaaaacatacaaaagggaacgcaagtca
accccccgttggaatgagaagaaagcaatccagatctcaacagaagaaggcactgctgtg
aatatcaaatcttgtgatacacctgtaaggaaaaccttaatgcgaaagaggaaggcttca
tcagaattgacacctgaggatttcatcaggaggcaggatgtgaaagcaagcattaagagg
cctggtgaagatgaagatcctaatttggaagagggtggccaaggttatcttgctaataaa
agtcctgtgcctgaggaaaaggaagctgagtttccagcagaacctgtcaagaaaggtgta
tccattttgaaagctgataccagcaactcagctcacttgagaactccaaagaagagaact
aactctttgagcaagaggaacaggcaattagttgggccagttgctgctttgcagtcagtg
atggatagaagttccaggtcccctgggaaggatgagatgcagatagacagctacccaagc
agtgaggaaccaaaagaggaaggtccaggccagaagcaaatcaggcggagcaggaggctt
caggtactgacagaagaagcccagaggggtgataggagacttcagttgcatacagaagga
acctggagggaaagggagccagcaaagagaggaaagaagcaagtggaagaaagagagagg
aaacaaagtgggtctcaggtgggaaacatttcatcctctccctctgtagcagatgatgac
cccaccatattgcaaggcaggctgcaggagcatatgccttggttgggtgccaacctgatg
ggcatggaagatgctgcagataaggtttgtactaatcctacaacctctcctagtgtgttg
ggagttgttaaaggtaccccaactgttgaacaaacagcagaggacaagcagcagagtcct
ccttgcattgttcccaatgactctcaagggagctgctcactcttgcagcttcattctagg
aaggtgaggcaaaagacttttgaggacaaacagttcaaagcagtaccacagtctgagaaa
agtgcatcgtgtgcccaagaactgaagagtgatgggttttgtacgagggatatgacagaa
agctacaaagtccccaaaacaggtggtaaagcaggggctttagagttaaatccagaaact
gatgacagtgaactggagacaggcttcatgcggaagatattcagccgctgcaaacgccaa
tcattcttgctgcatccaagtccaatgaaggaatctgctgcagaaattcaaagggagccg
agcacagactgtgtgcaagacagcaagtctgattgtgtgaggaaatcagttcaagatgta
gacaggatttatgaggaaagaggacaagctcttacttgtgaggtgaccaaaggcatctct
gtccaaagtctgtcatcttgcacctccagtttccctgagcatgagagtagaactgagcac
ttccaggttgctttacaagctccatctcctgaccatccatctattccggtgcgttctgcc
agtaagagagctgagggcagaaatcagctacagagtataaatccaggaagtgaaaaggaa
gcacccccagaaatgggagaaactgcaaacatggatggcagcagcagaagcccaagttta
agtcccattaatgaaataaattcctatacagactgttttcaaggaataggacctgaaggt
gctgaaaacaaaaggctggcattgagctcccagccagaactagtacagttgtgtcctgaa
gcttgtcagcaaccacgtcctgaattcagctctgtccacactggaggggaaagtagcaca
atggaacaaaagcaactgaagagcagcatagaacaagcaatagaaatttccagcccaggt
attcccaggtgcctggcttctggagataatttggaacagtccactgagagagagtttcac
agctttccactgttgtcagaaacaccgaagggctcgctgggtccaggcaatgaaggcaaa
aaaagtccatctaattttggggaaatgggcaagaaaggcatcttggctgtgtttgctaaa
actgatgaggaaactccccataagagagacctcaacagcagcaacggatccaaatcaaaa
tgtaaaggccttgttagagcatgccggaggctggtgcggaagctgtcatcctcagaagaa
gaaagttccagtgaagatgaagagttgccatgctttcaggcactgatatttgatcaatca
gcaagtacaccactgcaggcaatgaaagagaaggagaaatcagcagagattctagcagca
agccgcagaagtcacctcaaacccaaggataaggaggcctctctaagtcaggaatcaggg
tattctgtgaacctcttttcctcacagtcacatgcatctgaagatgaccctagcaaattt
catgactcgggacctagaattccagcttccacaggaaatctgacaagttcaagtatgagt
aaaaaggcctctcaaacgaaggacaaagtctccagagatgctgggcaactgaaagatgga
tgccaagaacatatgaatgcagaactcaatttaggtgaagaaacaatggactatgacagc
gaagctagccacatgtgggattcatcgggcctgtcctcccagagtgaaaccctcaccaca
caacaaagagatgccatgcagaacaatttaaaagaactccagcagaagatggctattctt
gaagcagttcttcaggaaacccagagtgatgactcaaaagagttgccactgccttgtgac
aagagcagaaaagatcagaaagggggagtggcatcgcttgtggaagcaaattctgaaaac
tggaaaacaagcaattcaaaagagtctttgtctgaactgccagctacaccagaatatccc
atcaacagcaaatatatggacccagtggttcagcagtgtcagaatgcacatgaatcagga
agtacagcaaagttgagacctcgaagcaaacaaagactcacagatgccttacctcctgcc
agaagcgtacatagcactccaggcagatactccacctccatatctaagtctgaagagcac
actttaagctgtttggccaccagggggtctcctgctgctgcacaagatacagaccaatca
agtgctacaagacacaaggcacagggaaggccacactcttccttggcacccatcacacac
tgcagttctgggaaagctaatcctaagagttcacttttcactatcacgagaaatatgtct
ctggtagcatcaggtttaaaacaaggcgagctgcgactagtgcagaagtttgccaggaaa
actgagagcgcttggtctaataaagttactgaagaaacaacccatgtagtcatgaaaacg
gatgaggatctagtctgtgagcggactctgaaatacttcctgggtattgctgcacggaaa
tgggtggtgagttaccagtggattgtacagtcactcaaggaaggaagagtcctagatgag
gaggagtttgaagtgagaggagatgtaatcaatgggagaagccatcaagggcctaaaaga
gcaagggaatctcatgctggaaagcttttccaaggactggaaatatgctgctatgggcca
ttcactgacttgcttccagaacaactagagtggatggtagaactatgtggtgcctccctg
gtgaagcagcctcatttatttgcatgtgcaacgatatggcctctccggtgctgccttctg
ctctccttgctattgctttattgcctccatcacattgtgtacccctttgtggagtcgtct
tttcctcctcaactcctcatctgcctggaggactgcagtaaagtgaagaacagcccaccc
tgctattatctctgcctgcagacagcagaagaaattgatcctgtgcagctgagctaa
DBGET
integrated database retrieval system
