Hemicordylus capensis (graceful crag lizard): 128330317
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Entry
128330317 CDS
T08891
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04620
Toll-like receptor signaling pathway
hcg04621
NOD-like receptor signaling pathway
hcg04622
RIG-I-like receptor signaling pathway
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128330317 (TRAF3)
04621 NOD-like receptor signaling pathway
128330317 (TRAF3)
04622 RIG-I-like receptor signaling pathway
128330317 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128330317 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Cast
ATG16
FliJ
Med28
zf-C3HC4
MPS2
Spc29
GAS
KxDL
Tropomyosin
DUF1664
Crescentin
Lys-AminoMut_A
SPATA24
T3SSipB
BLOC1_2
THOC7
Motif
Other DBs
NCBI-GeneID:
128330317
NCBI-ProteinID:
XP_053118956
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All DBs
Position
1:complement(22106069..22265619)
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AA seq
567 aa
AA seq
DB search
MEPSKKTDPPVSVEMVQQKANPDRSPVASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPRQTECGHRYCETCMAVLLSSTIPKCTACQETIVKEKIFKDNCCRRELLALQIFCRNEN
KGCREQLTLGHLLTHLRNDCLFEELPCPRIDCKEKILRRDLPDHIEKTCKYRETTCKYCK
SQVPMIMIQKHEDADCPCVMVTCPHKCSVSALLRKELNAHLSECINAPSTCSFKRYGCTF
QGTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRSNESKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKNAGQGARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGILIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
ILENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagcaagaaaacagatcccccagtgtcagtggaaatggtacaacaaaaggca
aatcctgaccgcagccctgtagcatcaatttatgtgccagaacaaggtggctacaaagag
aaatttgtgaatgctgtggaagacaagtacaaatgtgaaaagtgtcatctcatattgtgc
aatcctagacagacagaatgtgggcatcggtattgtgagacttgcatggcagttttgctg
agttccacaattccaaaatgcacagcatgtcaagaaacaatagtgaaagaaaagatattt
aaagacaattgctgtcggagagagcttcttgctcttcagatattctgcagaaatgaaaat
aaaggttgcagagaacaattgaccttgggacatttgcttacacatctgaggaacgactgt
ctgtttgaagaacttccatgccctcgtattgattgtaaagagaaaatactgagaagagac
ttgccagaccatatagaaaaaacttgtaaatatcgggaaacaacatgtaaatactgtaaa
agccaagtcccaatgattatgatacagaaacatgaagatgcagactgcccctgtgttatg
gtgacatgtccccataaatgtagtgtttcagcactcctgagaaaagagttgaatgcacac
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaatcagcaagttaaagcacatgaagccacctcagcagtgcagcatgtagac
ttattgaaagagtggagtaattgtctagaaaataaggtggccatgctccagaatgaaagt
ttggaaaagaacaagagtatacaaaccttacataatcaaatttgtagctttgaaatagaa
attgagagacagaaggaaatgctgcggagtaatgaatctaaaatacatcacttacagcgg
gtgatagacagccaggcagagaagctgaaagaattggacaaagagatccgtcccttccga
cagaactgggaggaagcagacagcatgaaaagtagtgtcgagtccctgcagaacagagtg
actgagctggaaagcgttgacaagaatgctgggcaaggagcaagaaatacaggtcttcta
gaatcacagttatctaggcatgatcaaatgctgagtgttcacgatatccggctggctgac
atggacctccgattccaagttctggaaacagccagttacaatggaatattaatctggaaa
atccgagattacaaacgtcggaagcaagaggccgtcatggggaagactttgtccttgtat
agccaacctttttatacaggatactttggctataagatgtgtgccagagtttacctcaat
ggagatgggatgggcaaagggacgcacttgtctttgttctttgtcataatgcgtggagaa
tacgatgcattgcttccatggccattcaagcagaaagtcacccttatgctaatggatcaa
ggaccttctcggcgccatttaggagatgctttcaaaccagacccaaacagcagtagcttc
aagaagcccacgggagaaatgaatattgcttctggctgcccagtctttgttgcgcagact
attctagaaaatggaacttatattaaagatgatactatttttattaaagtcatagtggat
acatcggacttaccggacccctga
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