Hemicordylus capensis (graceful crag lizard): 128331455
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Entry
128331455 CDS
T08891
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128331455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128331455
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hcg04054
]
128331455
Membrane trafficking [BR:
hcg04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
128331455
Pattern recognition receptors [BR:
hcg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128331455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
PYRIN
CARD
LCD1
Motif
Other DBs
NCBI-GeneID:
128331455
NCBI-ProteinID:
XP_053120885
LinkDB
All DBs
Position
6:complement(15711606..15732164)
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AA seq
552 aa
AA seq
DB search
MGTTVRDHLEDVLEDLTEDQLRRFKFKLNRTSVRKGHGNIPRGSLETGVLALSDLLVNYY
TEDYSVEVTVQLLNEINCKAEAKKLLALTGKGTSKPGTLVSGQGSDWWWWPELNPNMTLH
QSIKEEEDIDKTEIPEEDPWEIRFCDRCPPEENLAGEIMPEMAWDSQRSLEIYRIHCPEA
GSFRCYYSNLIFEVREAVTITYWNDSWNQHLKGEKPSWMIIAGPLFNIQAEPGEAVAAVH
LPHFLCLADEDPSQVQIAHFVEEGMSLEKPDSVKPTHVVLKNPTFSLRGVIFRVLSFFKI
NMRVHAMTLVYQAPDTSPKLHLYLLPNDRSLRKDVDNYERKCKSWKVEKPPGTTRPLTLG
SSFCLQSSSDIEVSPREHTFEYLDSDMDQQYFEVYAEQMQKQLVLNLMEKDTNEQVWEAN
VRQGDLTSFHLHPSEDACSSFPTPLPSTNITSGRNVLTGRQPHISSEQHFIDRHREELIQ
RVATVEPVLDILYGASILDDEQYQTISSKATSYNQMRVLYRLVPSWDHSCKDKLYEALKA
KNQYLIEDLERK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggggaccacggtccgcgaccacttggaggacgtcctggaggacctgacggaagaccag
ctgcggaggttcaaattcaagctgaacaggacctcggtcaggaagggccacgggaacatc
cccagagggagcctggagacgggtgtcttagcgctcagtgatctgctggttaactattac
accgaggattactccgtggaggtgactgttcagctgctgaacgagatcaactgcaaggcg
gaggccaagaaactcctcgctctcaccgggaaggggacaagtaagccaggaacacttgtg
tctggtcaaggtagcgactggtggtggtggccagaactcaaccccaacatgacacttcat
caatcaatcaaagaggaagaagatatcgataagacagagatccctgaagaagacccttgg
gagattagattttgtgaccgatgtccccctgaggagaatcttgcaggagaaatcatgcca
gaaatggcttgggattcacaaagaagccttgaaatatacaggatacactgccctgaggct
ggctccttccgttgctactacagcaatctcatatttgaggtgagagaagctgtaaccata
acatactggaatgattcatggaatcagcacctgaaaggagagaagccgtcttggatgatt
atcgccggccctttgttcaacatccaagcggagccaggagaggctgtggctgccgttcac
ctccctcacttcctgtgtcttgcagatgaagacccctcccaagtccaaattgcacatttt
gttgaagaagggatgagtttggagaaaccagacagtgtgaagccaactcatgttgtgttg
aaaaatccaacgttctctctccgtggagtaatttttagagtgctttcattttttaagata
aacatgcgagtccatgctatgacactggtctaccaggcacctgacacaagcccaaaactc
cacctataccttctccccaatgacagatccttaaggaaggatgttgataactatgaaagg
aaatgtaaatcatggaaagtagagaagcccccgggaaccacaaggcctttgacacttggc
tcttccttctgtttgcaaagctcaagtgatatcgaagtcagtcccagggagcatacgttt
gaatacttagattccgacatggatcaacagtactttgaagtgtatgcggaacagatgcaa
aaacagctggtgctcaacctgatggagaaggacacaaatgaacaagtgtgggaggccaat
gtgagacaaggagacctgacatctttccatttgcacccaagcgaagatgcttgcagttct
tttccgacccctctgccatccaccaatatcacctcaggacgaaatgtcctgacagggagg
cagccacacatctcatcagagcaacatttcattgatcggcaccgagaggagctgatccag
cgggttgccacagtggagccagtgctggatatattgtatggcgcttctatcctggatgat
gaacaataccaaacaatctcctcgaaggcaaccagctacaaccaaatgcgagtgctctac
agactagtcccgagttgggaccactcttgcaaggataagctgtatgaggcactgaaggcc
aaaaaccaatacctcattgaagatcttgaacgaaaatga
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