Hemicordylus capensis (graceful crag lizard): 128338845
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Entry
128338845 CDS
T08891
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04137
Mitophagy - animal
hcg04141
Protein processing in endoplasmic reticulum
hcg04210
Apoptosis
hcg04217
Necroptosis
hcg04621
NOD-like receptor signaling pathway
hcg04622
RIG-I-like receptor signaling pathway
hcg04920
Adipocytokine signaling pathway
hcg05132
Salmonella infection
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128338845 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128338845 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128338845 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
128338845 (TRAF2)
04217 Necroptosis
128338845 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128338845 (TRAF2)
04622 RIG-I-like receptor signaling pathway
128338845 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128338845 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128338845 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
128338845 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128338845 (TRAF2)
04121 Ubiquitin system [BR:
hcg04121
]
128338845 (TRAF2)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128338845 (TRAF2)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128338845 (TRAF2)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128338845 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Paramyxo_NS_C
zf-RING_6
MATH
Motif
Other DBs
NCBI-GeneID:
128338845
NCBI-ProteinID:
XP_053137874
LinkDB
All DBs
Position
17:14999852..15024994
Genome browser
AA seq
554 aa
AA seq
DB search
MLGREGRQTDHQAKEKGKGLDSHVDVHMAAANSTPPGSLDVNQPGFPKEILGSQLEIKYL
CSECKNILRRPFQAQCGHRYCSCCLKKIIRSGPQKCAACIQEGIYEPGVSILESNSTFPD
NAARREVESLLAICVNEGCTWKGTIKEYESCHEASCPFMLVACPACQAMVRLNEKEHHAE
RECPKRSLNCKYCKVLCYFPDIKAHDEVCPKFPLTCDGCGKKKIPREKFQDHVKTCSKCK
APCRFQPIGCPEVVENEKLPEHESKRLGEHLYMLLSFVLSLGPESDKLQPLPGLPSAESG
SGLLGGNPLLSESELSGSLQLLGKCEALERKTVTFENIVCVLNREVERVSLAAEACHRQL
QLDQEKMEVLSSKVRQLERSIALKDLALAEMERTIQEMEASSYDGVFIWKITDFARKRQE
AIAGRSPAVFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPSDALLRWPFN
QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPINKMESKNSYIRD
DTIFIKAIVDLTGL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtcgtgagggaaggcagacagaccatcaagccaaagaaaaaggaaagggcctt
gacagccacgtggacgttcacatggccgcagccaactcgactccccccggctctctggac
gtcaaccagccggggtttccaaaggagattctggggtcccaactggagatcaaatacctg
tgctcagagtgcaagaatattctgaggcgtccgttccaggcccaatgtgggcaccgctac
tgctcctgctgcctgaagaaaataatacgctcggggcctcagaagtgcgcagcctgtatc
caggaagggatatacgaaccaggggtttccatcttggaaagcaactcgacgttcccagac
aatgcagcccgacgggaagtggagagtcttctggcgatctgtgtcaatgagggttgcacg
tggaaagggacgatcaaagaatatgagagctgccacgaggccagctgccccttcatgcta
gtggcctgccccgcgtgccaggcgatggtcagactgaatgagaaggagcaccacgcggag
cgggagtgtcccaagaggagcctcaactgcaaatactgcaaagtcctttgctacttccct
gacatcaaggctcatgacgaggtgtgcccaaagtttcctctcacctgtgatggctgcgga
aagaagaagatcccgagagagaagtttcaagaccacgtcaagacctgtagcaaatgcaaa
gcaccctgccggttccagcccatcggctgccctgaggtggtggagaacgagaagctcccc
gagcacgaaagcaagcgcctaggggagcacctgtacatgctgctgagctttgtgctcagc
ctcgggcccgagtcggacaagctgcagcccctgccgggcctcccgtcggccgagtccggc
tccggcctgctgggtggcaaccctctgctctccgagtcggagctctccggctccttgcag
ctgctgggcaagtgcgaggccctggagaggaagaccgtcaccttcgagaacatcgtctgc
gtgctgaaccgcgaggtggagcgggtgtcgctggccgcagaggcctgccaccggcagctg
cagctggaccaggagaagatggaggtgctcagcagtaaggtccggcagctggagaggagc
attgcgctgaaggacttggccctggctgagatggagcgcaccatccaggagatggaggcc
tcctcctatgatggcgtcttcatctggaagatcaccgactttgcccggaagcgccaggag
gcgatcgctggccgctcgcctgccgtcttctctccagccttctacacaagcaaatacggc
tacaagatgtgcctgcgcatctacctcaacggggacggcacggggcggggcacccacctc
tccctgttcttcgtggtgatgaaaggacccagcgatgccctcctgcggtggcctttcaac
cagaaggtcaccctgatgcttctggaccaaaacaaccgggagcacgtgatcgatgccttc
cgccccgacgtgacgtcctcgtccttccagcggcccgtcagtgacatgaacattgccagt
ggctgcccacttttctgccccatcaacaagatggagagcaagaactcttacatccgggac
gacaccatcttcatcaaagccatcgtggacctcacgggcctctga
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integrated database retrieval system
