Hemicordylus capensis (graceful crag lizard): 128341705
Help
Entry
128341705 CDS
T08891
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04120
Ubiquitin mediated proteolysis
hcg04140
Autophagy - animal
hcg04144
Endocytosis
hcg04620
Toll-like receptor signaling pathway
hcg04621
NOD-like receptor signaling pathway
hcg04622
RIG-I-like receptor signaling pathway
hcg05132
Salmonella infection
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128341705 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128341705 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128341705 (TRAF6)
04140 Autophagy - animal
128341705 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128341705 (TRAF6)
04621 NOD-like receptor signaling pathway
128341705 (TRAF6)
04622 RIG-I-like receptor signaling pathway
128341705 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128341705 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
128341705 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128341705 (TRAF6)
04121 Ubiquitin system [BR:
hcg04121
]
128341705 (TRAF6)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128341705 (TRAF6)
Membrane trafficking [BR:
hcg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128341705 (TRAF6)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128341705 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
TRAF6_Z2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
TRAF3_RING
RING_XB3-XBAT31
Sina_ZnF
zf-RING_11
HAP1_N
U-box
PspA_IM30
DUF7310
DUF16
DUF4455
PUMA_CC
DUF1664
Med21
CENP-F_leu_zip
DUF7607
Laminin_II
Spc29
Motif
Other DBs
NCBI-GeneID:
128341705
NCBI-ProteinID:
XP_053144106
LinkDB
All DBs
Position
2:225990017..226030530
Genome browser
AA seq
538 aa
AA seq
DB search
MSLLHSNPSFEISDQDSGCCAAMASACSAGTKEESVGTSVSNGTSGTLSNSFMEDIQGYD
VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLEKQL
FPDNFAKREILSLTVKCPNGGCTQKMELRHLEDHQLHCGFALEKCPQCQADFHKNQLQEH
IEHTCPWRQVSCPNCALCMPYEEKELHDQSCLLANVFCEYCNTELIRGQLPNHYDNDCPT
APVPCTYSDFGCPERMQRNELARHMQEYTQVHMRMMAQHFRSIRVATPTCVPCDPSHFPS
SCECSPEVQNFKETIQHLEGRLVKQDHQIRELTAKMETQNTHMGDLKRVVRNLEEKLAEV
EAQQCNGIFIWKIENFSIYLKAQEEEKPVVIHSTGFYTGKPGYKLCLRLHIQLPTAQRCA
NYISLFVHMMQGDYDSHLPWPFQGTIRLSILDQSEGPLRHNHEEIMDTKPELLAFQRPVT
HRSPKGFGYVTFMQLQALKQRTYIKGDTLLIRCEVVTRLDLSSLRREGFQPRSTDGST
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagtctactacacagcaaccccagctttgagatcagtgatcaagacagtggctgctgt
gcggccatggccagtgcctgcagcgctggaaccaaagaggagagtgttggcaccagtgtc
agcaatggcaccagcgggaccctttcaaactctttcatggaggatatccagggctatgat
gtggagtttgacccgccactggaaagtaaatatgaatgtcctatctgcttaatggctctg
cgggaagccgtgcagacaccttgcggacatcgtttctgcaaagcttgcattgtcaaatca
ataagagatgctggtcataagtgtcctatagacaatgaaattctattagaaaagcaactc
ttccctgacaattttgcaaaacgggaaatcctgtcactgaccgtgaaatgtcccaacgga
ggctgtactcagaagatggagctgcggcatctggaggaccaccagctgcactgtggcttt
gctttggagaagtgtccgcagtgccaagctgatttccataagaaccagctccaagaacac
atagaacacacgtgtccatggcgccaggtctcctgtccaaattgtgccttgtgtatgcct
tatgaagaaaaagagctccatgaccagtcatgcctcctggcgaatgtcttctgtgaatac
tgcaatacagagctaatcagaggacagctgcctaatcactatgataatgattgccccact
gctccagtaccgtgtacttacagtgactttggatgtccagaaaggatgcagaggaatgag
ttggcacgccatatgcaagagtacactcaagttcatatgagaatgatggctcagcatttc
cggagcatcagagttgctaccccaacttgtgtgccttgtgacccctctcactttccctcc
tcatgcgaatgtagcccagaagtccagaacttcaaggaaaccattcagcacctggagggg
cgcttggtaaagcaagaccaccagatccgagaactgactgcaaagatggagacacagaac
acccacatgggggatctcaaacgcgttgtccggaacctagaggagaaattagctgaagtg
gaagcccagcaatgtaatggcattttcatctggaagattgagaacttcagtatttacctg
aaagcccaggaagaagagaagcctgttgtgatccacagcactggcttctacacggggaag
cctggctacaaactttgtttgcgcctgcatatccagttgccaactgctcaacgttgtgct
aactatatttcccttttcgttcacatgatgcaaggggactatgacagtcatctgccatgg
ccattccagggcaccattcgactctctatcctagatcagtcagaaggacctttgagacac
aaccacgaagaaatcatggataccaagcctgagctgttagccttccagcggccagtaacc
caccgcagcccaaaaggctttggatatgtgaccttcatgcagttgcaagcactaaaacaa
agaacctatataaaaggagatactctcttgatacgctgtgaggttgtaacacgcttggac
ctgtccagtctccgaagagagggcttccagcctcgtagcactgatgggtcaacatag
DBGET
integrated database retrieval system
