Hemicordylus capensis (graceful crag lizard): 128341897
Help
Entry
128341897 CDS
T08891
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04137
Mitophagy - animal
hcg04141
Protein processing in endoplasmic reticulum
hcg04210
Apoptosis
hcg04217
Necroptosis
hcg04621
NOD-like receptor signaling pathway
hcg04622
RIG-I-like receptor signaling pathway
hcg04920
Adipocytokine signaling pathway
hcg05132
Salmonella infection
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128341897
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128341897
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128341897
09143 Cell growth and death
04210 Apoptosis
128341897
04217 Necroptosis
128341897
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128341897
04622 RIG-I-like receptor signaling pathway
128341897
09152 Endocrine system
04920 Adipocytokine signaling pathway
128341897
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128341897
09171 Infectious disease: bacterial
05132 Salmonella infection
128341897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128341897
04121 Ubiquitin system [BR:
hcg04121
]
128341897
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128341897
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128341897
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128341897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-C3HC4_4
TRAF2_zf
zf-C3HC4
zf-RING_10
CCD48
zf-RING_2
zf-C3HC4_5
zf-RING_UBOX
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
128341897
NCBI-ProteinID:
XP_053144518
LinkDB
All DBs
Position
2:complement(254440181..254447289)
Genome browser
AA seq
368 aa
AA seq
DB search
MMGKWKGSVMPVDPLTNSGLLCQECGFLLITPQQAECGHRYCTACVKGLFRETDKLTCRT
CKKRLSPKQFHSDKAAENDTLATQVACPNFDCTWTGTLKSYQEHTCPPVAHLGIARSTAF
AFGEQDGNKEKKPLWSVSSNTTGVSSLNGEAVLLRVEALEMMVASLRRQLNSQVAAVKSA
QRCCSQYEKLLKSSQDLYNASNGAKESVPTSPELISTDGILVWKVENFSKLMKDAKEGKR
RSFYSPAFATHAFGYHLCVRLYPDGDGIGKGSHLSLFLALAKGPYDDILPWPFRQKVTFS
LLDPNRKMPPLKETFLPDPHSSSFHQPREILNVASGSPLFASHIQIPSYLKDDVLYLKVV
VDLAGMEM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaaatggaaggggtccgtgatgcccgtggatcccctcactaactcgggattg
ctctgccaggagtgtggcttcctcctcatcacgccgcagcaggcagagtgcgggcaccgc
tactgcacggcatgtgtgaaggggctcttcagggagactgacaagttaacatgcaggact
tgcaagaaaagactgagccccaaacagttccatagcgacaaagcagcagagaatgacact
cttgccacccaagttgcctgcccaaattttgactgtacatggaccggcaccctgaaatca
taccaggaacacacctgcccccctgtggcacaccttggaattgcaaggagtacagctttt
gcctttggagaacaagatgggaataaagaaaagaaacccctctggagtgtcagtagcaac
accacaggtgtctcttcactgaatggggaagctgtcctgctgcgtgtggaggccttggag
atgatggtggcatctctgcgtcggcaactgaacagtcaggtagccgcagtgaagtctgcc
caacgctgctgttcccaatatgagaagctcctgaaaagctctcaggatctgtacaatgcc
tctaatggggccaaagagtccgtaccaacgtcgccagagctgattagcaccgatggaata
ttggtgtggaaagtggagaacttttccaagctcatgaaggatgccaaagagggaaagagg
cgttccttctattctccagcctttgccacccatgcatttgggtaccatctctgtgtccgg
ctgtaccccgatggcgacggcattggcaaaggcagccatctttcactgttcctcgccttg
gccaaggggccctatgatgacatcctgccctggcccttccggcagaaggtcaccttctct
ctcctggaccctaaccgaaagatgccgcccctgaaggagaccttccttcctgatccccac
agcagctccttccaccaaccccgggagatcctcaatgtggccagtgggagcccccttttt
gccagccacatccagatccccagctacctcaaggatgatgtgctgtacctcaaggtggtg
gtggatttggcagggatggaaatgtga
DBGET
integrated database retrieval system
