Hemicordylus capensis (graceful crag lizard): 128342959
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Entry
128342959 CDS
T08891
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 4 chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04145
Phagosome
hcg04514
Cell adhesion molecules
hcg04672
Intestinal immune network for IgA production
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128342959
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128342959
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128342959
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128342959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128342959
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128342959
Exosomal proteins of epithelial cells
128342959
Exosomal proteins of breast milk
128342959
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
ig
Ig_3
Ig_2
Psg1
C2-set_2
PetL
Motif
Other DBs
NCBI-GeneID:
128342959
NCBI-ProteinID:
XP_053147180
LinkDB
All DBs
Position
2:complement(226409608..226427549)
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AA seq
262 aa
AA seq
DB search
MLLLVLLVLLGPSLTHGSEARRKTSAHFLVQDKRQCHFTNGTRQVYLLARYIYDRQEIAR
FDSRLGEYVAITETEAADVQLWNSNKARLQWMQGEVDRFCRYKYRVFENAVTTRKVKPTV
KISLMKPESLAHHSLLLCTASGFYPSEIEITWLKNGQQEKDGVAYGEELQNGDWTYQTQV
MLETLVQQGDVYTCQVEHVSLETPITVQWEPRMSDAARIKVWTGVVGIVLGMLSVAVGLY
LFLKNKKGEQDSSEGVFIPGAL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgctggtgctgctggtgctgctgggaccatccttgacccatgggagtgaggca
agaaggaagacctctgcccatttcctcgtccaggacaagcgccagtgccacttcaccaat
gggacacggcaggtgtacttgctggcccggtacatctacgaccggcaggagatcgcccga
ttcgacagccgcctcggggaatacgtggccatcacagagaccgaggcggccgatgtccag
ctgtggaacagcaacaaggcacgcctgcagtggatgcagggcgaggtggaccggttctgc
cggtacaaatacagagtctttgagaatgcggtcaccaccaggaaggttaagcccacagtg
aaaatctccctcatgaagcctgaatctctcgcccaccattccttgctgctctgcaccgca
tcaggtttttacccctcggagattgagatcacgtggctgaagaacgggcaacaggaaaaa
gacggggtagcctacggcgaggagctccagaatggagactggacttaccagacccaggtg
atgctggagacgttggtccagcaaggagatgtctacacctgccaggtggaacacgtcagc
ctggagaccccaatcaccgtgcagtgggagccacggatgtcagacgctgccaggatcaaa
gtctggacaggagtcgtggggattgtactgggcatgctctctgtggcagtgggactctac
ctcttcctgaagaataagaaaggagaacaggattcctctgaaggagtctttattcctggc
gcactatga
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