Hemicordylus capensis (graceful crag lizard): 128344928
Help
Entry
128344928 CDS
T08891
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128344928 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
128344928 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128344928 (LSM3)
03041 Spliceosome [BR:
hcg03041
]
128344928 (LSM3)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128344928 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
128344928 (LSM3)
Spliceosome [BR:
hcg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128344928 (LSM3)
Complex C
U2 snRNP components
128344928 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
128344928
NCBI-ProteinID:
XP_053151987
LinkDB
All DBs
Position
2:complement(297648746..297654298)
Genome browser
AA seq
102 aa
AA seq
DB search
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggtggaccagcaacaaactaccaacactgtagaagagcccttggacctc
atcagactcagtcttgatgaaagaatttatgtgaaaatgaggaatgatcgagaacttcga
ggcaggctacatgcttatgatcaacacttaaatatgattttgggtgatgttgaagagact
gtgacaacaatagagattgatgaagaaacctatgaagagatttataaatccaccaagcgg
aatatcccaatgctgtttgtcagaggagatggagttgtacttgtagctcctccactaagg
gtcggctga
DBGET
integrated database retrieval system
