Hemicordylus capensis (graceful crag lizard): 128345297
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Entry
128345297 CDS
T08891
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128345297 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128345297 (LDLR)
Membrane trafficking [BR:
hcg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128345297 (LDLR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
DUF5050
hEGF
EGF_3
TMEM154
Psg1
Motif
Other DBs
NCBI-GeneID:
128345297
NCBI-ProteinID:
XP_053153058
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Position
2:173820482..173851830
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AA seq
869 aa
AA seq
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MIPGRLETAFLVSLMFSILSQISGNGVDKCRRNEFQCGNGECIPYKWICDGKAECRDGSD
ESQDACKSVTCEPRQFSCGGRINRCIDMSWRCDLKTDCENGSDEENCPPKRCADNEFQCK
NGNCVVWDFVCDEDNDCEDKSDEENCPALTCNPEMFHCNSSECIPKLWLCDNDEDCKDGS
DESPVYCGAKWEASKANPCSSLEFQCGSGECIHQRWQCDGGFDCKDKSDEANCAKPTCRP
DEFQCNDGTCIHGSLQCNMEDDCKDMSDEIGCVNVTTCKGSNIFKCRSGECITMDKVCNS
RKDCGDWSDEPLKECRTNECLANNGGCSHICNDLKIGYECLCPEGFQLIDQRRCEDINEC
FDPDACSQICVNLVGSYKCECNEGFQINPTTGSCKAIGTVAYLFFTNRHEVRKMTLDRSE
YTSLIPHLKDAVALDMEIANNRIYWSDMSQKKIYSTPIDKADNHSHHSTVISSGIRYPEG
IAVDWVHSNIYWTDAGLSTISVASSEGLKRKTLIKEVGAKPRSIVVDPVHGFMYWTDWGI
VAKIAKSGLNGVDTFPLVKEGILWPNGITLDLANQRLYWVDSKYHSLSSIDVNGGNRKII
LVNEEKLAHPFAITVFEDKVFWTDVHNEAIFNANRLTGSDIVKVAEDLFSPEDMTLFHSV
RQPQGVNWCEKNGIPNGGCQYLCLPAPQITLHSAKYTCACPDGLNLAMDMRSCITGNVPV
APPAVANATVPPTTRMTPLVKLLTPTSARRETTRPPSSAAATTVLSRSTTLEMVTLSQQA
RNDIAAESDGRKRNGSTALSIVIPLVVIILVSFGAFLVWKNWRLKNTNSINFDNPVYQKT
TEDEIHICRNTEGYTHLSRQIVCLEDDTE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaggtcgattggaaacagctttcctggtttcgctgatgttcagcatcctcagc
cagatttcgggaaacggtgtagataaatgcagaaggaatgagtttcaatgtgggaatgga
gaatgcattccttacaaatggatttgtgatggcaaagctgagtgccgtgatggctctgac
gaatcccaagatgcctgcaaatctgtgacttgtgagccaaggcagttcagctgcggtggc
cgtattaatcgttgcattgatatgtcctggcggtgcgacttgaaaacggattgtgaaaat
ggctccgatgaagagaactgcccccctaaacgctgtgctgacaatgagttccagtgcaaa
aatggaaactgtgttgtctgggattttgtctgtgatgaagataatgattgtgaggataag
agcgatgaagagaactgccctgccctaacctgcaaccctgaaatgttccactgcaacagc
tcggagtgtattcccaagctctggctctgcgacaatgatgaagactgtaaggatgggtca
gatgagtcaccggtgtactgtggggcaaaatgggaagcctccaaagccaatccttgctca
tcactggagttccaatgtgggagtggcgagtgcatccatcagcgctggcagtgtgatggt
ggctttgactgcaaagacaagtctgatgaggcaaactgtgcgaaacccacatgccgccca
gatgaattccagtgtaacgatggtacatgcatccatggaagcctgcagtgcaacatggaa
gatgactgcaaagacatgagtgatgagattggctgtgtcaatgtgacaacctgcaaagga
tcaaatatatttaagtgccgttctggagaatgtatcactatggacaaggtctgcaacagc
aggaaagactgtggggactggtcagacgagcccctcaaggaatgccgaacaaatgaatgt
ttggccaacaatggtggctgctcccacatatgcaatgatctcaaaattggatatgaatgt
ttatgtcctgagggattccagctgattgaccagagaagatgtgaagatatcaatgagtgt
ttcgaccctgatgcctgtagccaaatttgtgtgaatttggtaggaagctataagtgtgaa
tgcaatgaaggctttcagatcaaccctaccaccgggagctgcaaagcaattggcacggtt
gcatacctcttcttcactaatcgccatgaggtcaggaagatgactctagaccgcagcgag
tacaccagtctgatcccccatctcaaagatgcagtggccttggatatggaaattgccaac
aacagaatctactggtctgacatgtctcagaaaaaaatatacagcaccccaatagacaag
gctgacaatcactcccaccactccaccgtgatcagcagtggcatcagatatccagaaggc
atagctgttgactgggtgcacagcaacatctactggaccgatgctggcctgagcacgatc
tctgtggccagcagcgaaggcttgaaacggaagactctgatcaaggaagtgggtgccaag
ccccgttccattgtggtggatcccgttcatggatttatgtactggactgactggggcatc
gttgctaaaattgccaaaagtggtctgaatggagttgacacattccccttggtgaaggaa
ggcattctgtggcctaatggaataacactagatttggctaaccagcgcctctactgggta
gactcaaagtaccactccctctccagcattgatgtgaatgggggaaacagaaaaatcatc
ctcgtgaatgaggagaagctggcccacccttttgccatcacagtctttgaggataaagta
ttctggacggatgtccataacgaagccattttcaacgctaaccgtctgactggttcagat
attgtcaaggtggcagaggacctattttcacctgaggacatgacactctttcacagtgtg
cggcagccacaaggtgtgaactggtgtgagaagaatggcatccctaatggaggctgccag
tatctgtgtcttcctgccccacaaatcacactccactctgccaagtacacttgtgcctgt
cctgatggtttgaacttagccatggacatgagaagttgtatcacaggtaatgttcctgtt
gccccaccggcagtcgccaatgcaactgtgccgcctactacaaggatgacacctttagtg
aagctgctcaccccaaccagtgctcggagggagacaacgagacctccgtcttctgctgct
gctaccactgtgctgagcagaagcaccacgcttgaaatggtcaccttatcccagcaagct
cgaaatgacattgctgcggaatcagatggaagaaaacgaaatggctcaacagcgctctct
attgtcataccattggtggtgattattttagtctcctttggtgctttcctggtttggaag
aactggcgtctcaagaataccaatagcattaattttgacaacccagtctaccagaaaaca
actgaggatgagattcacatttgtcggaatacagaagggtacacacatctatcgagacaa
atagtctgcctggaagatgatacagaatga
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