Hemicordylus capensis (graceful crag lizard): 128345638
Help
Entry
128345638 CDS
T08891
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128345638 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hcg01007
]
128345638 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128345638 (IARS1)
Enzymes [BR:
hcg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
128345638 (IARS1)
Amino acid related enzymes [BR:
hcg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128345638 (IARS1)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128345638 (IARS1)
Prokaryotic type
Other AARSs
128345638 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
128345638
NCBI-ProteinID:
XP_053153862
LinkDB
All DBs
Position
2:complement(317300321..317455326)
Genome browser
AA seq
1265 aa
AA seq
DB search
MLVQQVPENINFPQEEEKILQIWNTLNCFQECLKQSKNRPRFTFYDGPPFATGLPHYGHI
LAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKALGIKGPEDVAKMGIAEYNNN
CRGIVMRYSQEWKVSVTRLGRWIDFDNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVM
PFSTACNTPLSNFESHQNYKDVQDPSVIVNFPLEEDENVSLVAWTTTPWTLPSNLALCVN
PELQYVKVKDKNTGKIFILMEARLLSLYKSESEYTVLDRFPGITLKGKKYKPLFNYFIKC
KENGAFTVVTDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFT
AEVADFAGQYVKDADKNIIKTLKEQGRLIHISTFKHSYPFCWRSDTPLIYKAVPSWFVRV
EHMVDKLLENNAQCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDVEEVV
CIGSVAELEELTGVKVTDLHRESIDHITIPSRCGKGVLHRVSEVFDCWFESGSMPYAQVH
YPFENRKEFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQ
KMSKRKKNYPDPTNIVNTYGADALRLYLINSPVVRAENLKFKEEGVRDVLKDVFLPWYNA
YRFLIQNVVVLQLKEGGKEFLYNENTVKESNNIMDKWILSFTQSLIQFFKEEMAAYRLYT
VVPRLVKFVDILTNWYVRMNRRRLKGENGTDDCIMALETLFSVLYSMCRLMAPYTPFITE
LMYQNLKRLIDPVCIQEKNTESIHYLMLPQVREDLIDKNIENAVSRMQSVIELGRVIRDR
KTIPVKYPLKEVVVIHQDSRALEDIRSFEKYILEELNVRQVTLSTDKDKYGIRLRAEPDH
MVLGKRLKGAFKSVMAAIKELTSEQLEKFQKTGTVFVEGHELHEDDLRLMYTFDQTVGGS
AQFEAHSDSQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRACPE
GDYLDTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQEKTQLKGSELEITLARGALHHHI
EPACAYVNLNICVNGKEQDGMVLLENPKGDNKLDFTKLINAISCIFGLKNSKLVVFNGKT
ELKSQTDLLSLSGNTLHVTSGSAPASNGPDGLLCQYINLQLVNAKPQECLNGVIGTLLME
NPVGQNGLTYQGLLHETGKVFGLRSRRLKLFLDEALTEEITKETSMKTLNTKTLYVHVMA
TTAEY
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgctggtacagcaagttccagagaacataaattttccacaggaggaagagaaaatattg
cagatttggaatacacttaattgttttcaagaatgcctgaaacaatcaaaaaatagacct
aggtttaccttctatgatggcccaccatttgccacaggacttcctcactatggacacata
cttgcaggaaccattaaagacatagtaactagatttgctcaccagagtggttttcatgtg
gatagacgatttggctgggattgtcatggtttgccagtggagtatgaaattgacaaagca
ctaggcatcaaaggaccagaagatgtagcaaaaatggggattgccgagtataacaacaac
tgcagaggaattgtgatgagatactcgcaggaatggaaagtcagtgttacaaggcttgga
cggtggattgattttgacaatgactataaaactctatatccagagttcatggagtctgtg
tggtgggttttcaaacagctgtatgacaaaggactggtatatcgaggcgttaaagtcatg
cctttttcaactgcatgcaacacacctctttctaactttgaatctcaccaaaattataag
gacgttcaagatccttcagtcattgttaacttcccgttagaagaggatgaaaatgtgtcg
ctagttgcttggacaacaactccttggactctgcctagcaacttggcactctgtgttaat
ccagagttgcaatatgtgaaggtgaaagacaaaaatacagggaaaatcttcattttgatg
gaagccaggctgttatctctctacaaatctgaaagtgaatatacagtacttgacaggttt
cctggtattactcttaaaggaaagaaatataagcctctcttcaattactttattaagtgc
aaagaaaatggtgcttttactgtagtgactgacaactatgtgaaggaagaagaaggtacg
ggggttgtacatcaagctccctattttggcgctgatgattacagagtctgcatggatttt
aatattattcagaaagattcagtgccagtttgtcctgttgatgcctcgggctgcttcaca
gcagaagtggccgattttgctggacagtatgtgaaggatgccgataagaacatcatcaag
actctaaaagagcaaggcagactgatccacatcagcactttcaagcacagctatcctttt
tgctggaggtctgatactcctctaatatacaaagctgtgccaagctggtttgttcgtgtg
gagcacatggtagacaagctgttggaaaataatgcccaatgctactgggttcctgaattt
gtgagagagaaaagatttggaaactggttgagagatgcgcgtgactgggctatttcacga
aaccgatactggggcacacccatcccattgtgggtcagtgatgatgttgaagaggtagtc
tgtattggatctgtagcagaactggaagagttgacaggagtgaaagttactgatctccat
agggaaagtattgatcacataaccatcccttcacgctgtggtaaaggtgtattgcatcgt
gtttcagaagtttttgactgttggtttgaaagtggaagcatgccttatgcccaagtccat
tatccttttgagaacagaaaagaatttgaagatgcttttcctgctgacttcattgctgaa
ggcattgaccaaaccagaggatggttttacactttgctagtgttgtcgaccgctcttttt
gggaagcctcctttcaagaatgtcattgtaaatggcctagttcttgccagtgatgggcaa
aagatgagtaaacgaaagaagaattacccagatccaaccaatattgtaaacacgtatggg
gctgatgctctgaggctgtatcttatcaattctcctgtggtgagagcagaaaacttaaaa
tttaaagaagagggtgtaagggatgtgctcaaggatgtcttcctgccctggtacaatgca
tatcgcttcctcattcagaatgttgttgttctgcaacttaaggaaggtggaaaggaattc
ctttacaatgagaacacagttaaagaaagtaacaacatcatggataaatggattctatct
tttacacaatcactcattcagttcttcaaagaagaaatggcagcctacagactctacaca
gtggttcctcggctagttaagtttgtagacattcttaccaactggtatgtcagaatgaat
cgcagaaggttaaagggtgaaaatggaacagatgactgcattatggcattagaaacctta
ttcagtgtactttactccatgtgcagactcatggcaccttatactccatttatcactgaa
ctgatgtaccagaatttgaagagacttatagatccagtctgcattcaagagaagaacact
gagagcatccactaccttatgcttcctcaagttagggaggatctgattgataaaaatatt
gaaaatgctgtttctcggatgcagtctgttattgaacttggacgggtaattagagatagg
aaaaccattccagtaaagtatccactgaaagaagtggtggttatccatcaggattccagg
gcactggaagatatcaggtcctttgaaaagtacatacttgaggaacttaatgtccgtcaa
gtaacattatcaactgataaagataagtatggaatccgtttgagagcagaacctgatcac
atggtgcttggaaagcggctgaaaggtgcctttaaatctgttatggcagctatcaaggag
ctaactagtgagcagttggaaaaattccagaagactggcacagtttttgtggaaggacat
gaactacatgaagatgatctccgtctgatgtacacctttgaccagactgtaggaggatct
gcccagtttgaagcgcactctgattctcaggttttggttctcctggatgttactcctgat
caatccatggttgatgaaggtgttgctcgtgaagtaataaatcgcatccaaaaacttcgg
aagaagcgcaatcttgtgcctactgatgagattacagtttattaccgagcatgtccagaa
ggtgattaccttgatactgttattaaggagcatacagatttcatttttgcaacaataaag
gctgccttgaagccatacccagtgcctacctcaaaagaagtgcttattcaagagaaaacc
cagctgaaaggatcagaactggaaattactcttgccagaggtgctttacatcatcacatt
gagccagcatgtgcttatgtcaatctcaacatctgtgttaatggtaaagagcaagatggt
atggtgttactagaaaatcccaagggtgataataaattggacttcaccaaactcatcaat
gccatctcatgcatttttgggcttaaaaattcaaagttagttgttttcaatggaaaaaca
gaattgaaaagccaaactgacttgctaagtctcagtggaaacacacttcatgttacttca
ggatcagctccagcttcgaacggccctgatggcttgctctgtcagtatatcaatttgcag
ttagtgaatgcaaaaccacaagagtgtctgaatggagtgattggaacccttcttatggaa
aaccctgttggtcagaatggactcacatatcaagggcttcttcatgaaacagggaaagtg
tttggactcagaagcaggagactgaaattgtttttggatgaagcacttacagaggagatt
acaaaggaaacctccatgaagactcttaacacgaagacactgtatgttcatgttatggca
acaacagctgaatactga
DBGET
integrated database retrieval system
