Hemicordylus capensis (graceful crag lizard): 128346417
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Entry
128346417 CDS
T08891
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128346417 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128346417 (C9orf72)
Membrane trafficking [BR:
hcg04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128346417 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
128346417
NCBI-ProteinID:
XP_053155680
LinkDB
All DBs
Position
2:complement(126551258..126582288)
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AA seq
481 aa
AA seq
DB search
MTALCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQQLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKGVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LSFYLPLHQVCVDRLTHIIRKGRIWMHKERQEHFQKAVIEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIRDTVLSDDDIGDSCHEGFLLKAISSHLQTCGCSVIVGSS
AEKVNKIVRTLCLFLTSAERKCSRLCRNETSFKYESGLFVQGLLKDVTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSDEEMAQDTIIHTDESF
TPDLNVFQDVLHQDTLVKAFLDQVFNLKPGLSLRNVFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFLFGRPFYTSVQERDVLMA
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctctatgtcctcctccttctcctgctgttgccaagaccgagattgcattgagt
ggagagtcaccgttacttgctgctacttttgcatactgggataatattcttggacccagg
gtcagacacatctgggccccgaaaacagagcagcagcttctgagtgatggagaaataaca
tttcttgccaaccatactctgaatggggaaatactccggaatgcagagagtggtgcaata
gatgtgaagttttttgttttggctgagaaaggagtcattatcgtgtcattaatttttgat
gggaattggaatggggacagaagtacatatggactgtcgattatacttccacaaagtgag
cttagcttctaccttccccttcaccaggtgtgtgtagacagactgacacacataataaga
aaaggaaggatatggatgcacaaggaaaggcaagaacacttccagaaagctgtcatagaa
ggcacagagagaatggaagaccagggccagagcatcattccaatgctgacgggagaagtt
attcctgtaatggaactcctttcatctatgaaatcgcacagtgttccagaagaaatagat
atacgtgacacggtgcttagtgatgacgacattggagacagctgtcatgaaggtttcctc
cttaaagccatcagttctcacctgcagacttgtggatgttcggtaattgtaggaagtagt
gcagaaaaggttaataagatagtgcggacactgtgcctctttctcacttcagcagagcga
aagtgttccaggctttgcagaaatgaaacctccttcaagtacgagtctggtctctttgta
caaggattgctcaaggatgtgactggaagctttgtgttgcctttccgtcaagtgatgtat
gctccatatcctaccacacacatagatgtagatgtcaacacagtgaaacagatgcctcca
tgccatgaacatatctataatcaacggcggtacatgaggtctgagctaacagcgttttgg
agagctacttcagatgaagagatggctcaggacaccattatccatacagacgaaagcttc
acacctgacttgaatgtgtttcaagacgtcttacaccaagacactctcgtaaaagccttc
ctggatcaggtctttaatttgaaacccggattgtctctgaggaatgtgttccttgcgcag
ttcttattagttcttcacagaaaagcattaactctcatcaaatacatagaagatgacacg
caaaaagggaaaaagcctttcaagtctcttcgtagcttgaagatagacctggacttaaca
gcagagggcgatcttaacataataatggctttagctgagaagatcaagcctggtttacat
tcatttctctttggccgacctttctacactagtgtacaggaacgtgatgtcctaatggca
ttttga
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integrated database retrieval system
