Hemicordylus capensis (graceful crag lizard): 128346976
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Entry
128346976 CDS
T08891
Name
(RefSeq) HLA class II histocompatibility antigen, DM alpha chain isoform X1
KO
K06752
MHC class II antigen
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04145
Phagosome
hcg04514
Cell adhesion molecules
hcg04672
Intestinal immune network for IgA production
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128346976
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128346976
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128346976
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128346976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128346976
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128346976
Exosomal proteins of epithelial cells
128346976
Exosomal proteins of breast milk
128346976
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Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
DUF3188
Motif
Other DBs
NCBI-GeneID:
128346976
NCBI-ProteinID:
XP_053156832
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Position
2:225383516..225405639
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AA seq
260 aa
AA seq
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MGAIGRCSWMLMRACWAWALLWGAPAAVVASAAEDPAHVFSEVFFCQKDSPFSGLAQTLD
NDLLFWFSFPGSSWHARLPDFQPELHSRPSVDNISRENKNCDLILDYLTHFSDMYILMPE
AKGVPLVELFPLQPLQLGKSNTLVCSVSNIFPPSAELTWEHLGEPVTAGVSTTQIYPVED
LGFQMFSYLELIPREEDIYSCTVRTPRDKFSSMAFWVPRDAIASDLLVNILCGVAFGVGI
VLMIIGIVLIVQSRKPRIAD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccatcgggaggtgcagctggatgctaatgagagcctgctgggcctgggccttg
ctttggggggcgccggcggcagtggtggcgagtgcagcagaagaccccgcccatgtcttc
tccgaggtgttcttttgccagaaggactccccattttctggcctggcccaaactttggac
aatgacctgcttttctggttcagctttccagggtccagctggcatgcccgcctgcctgat
ttccagcctgagctgcacagccggccatctgtggataacatcagccgggaaaataaaaac
tgtgaccttatcctagactacctcactcacttttctgatatgtatatactaatgcctgaa
gccaaaggtgtccctctggtggagctgttccctctgcagcccctccagctgggcaaatcc
aacaccttggtctgctcggtgagcaatatcttcccgccatctgctgagctcacttgggag
catctgggggagccggtgactgcaggggtgtccaccactcagatctaccctgtcgaggat
ctgggcttccagatgttctcctacttggagctgatcccccgggaggaagatatctacagc
tgcactgtcaggaccccccgggacaagttcagcagcatggccttctgggtccccagagat
gccattgcctcagacctcctagtgaacatcctttgcggagttgctttcggagttggaatt
gtcttgatgatcatagggatcgtcctaattgtccagtctcgcaagcccagaatcgcagac
tga
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