Hemicordylus capensis (graceful crag lizard): 128348160
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Entry
128348160 CDS
T08891
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128348160 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128348160 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128348160 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
128348160
NCBI-ProteinID:
XP_053159799
LinkDB
All DBs
Position
1:393911947..394260333
Genome browser
AA seq
1658 aa
AA seq
DB search
MAWLRWAFLLCACVCLSPVSEASEKGRLRTITYVLRPGQSGTSGSRRQSGGQQQQQQQQR
TFNVELNTRYSARRSSTLERTRRMSKASGSGASVQLRLGPSVQLQRKPAQHTPASFSKAG
KLVPRAKLQLRESNSSVQVHPKSNLQQLQGVNVCGAQCCHGWSKAPGSQRCTKPNCSPPC
QNGGMCLRPQLCVCKPGTKGNTCEDTTKQETASPGGLGPGTPPWPIPQRSVQQTSLSKKV
QVQQKVNPMAQMTFTLKQKPSGGLPQQMQSQMIPLSSQTLMMNVHHGQTQEYVLKPKYYP
TKKVISGEQSTESSLPLRISQDLLASSFQLGNHTGRIKVVFTPSICTVTCKKGTCQNSCE
KGNTTTLISENGHAADTLTATNFRVVVCHLPCMNGGQCSSRDKCQCPPNYTGKLCQIPVQ
SGGAAKLYHNPQQAGKAVGSHVIHSTHTLPLTMPGQQGAKVKFPPNIVNIHVKHPPEATV
QFHQVSRIDSTSAGQKAKPSQSGHSQVSYQSLPFQKTQKVHSTYTHQQPVSHVYPVSAKT
QLGRCFQETIGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPRKPAYPGYSPMVDCPQ
GYKRINATFCQDINECQLQGVCPNGECLNTLGSYRCTCKMGFVPDPTLSRCIPDNPMVTE
EKGPCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPIPGTAAFKEICPGGMG
YTVSGSHKNKLYHQPSVRVQPPVIGKTQITQHVAKGTSPPPLPAKEEPVEALTISQKSEP
EVPVREVGTAAPDQELVSLDDREKPGQPQLSPGISTINLHPHFSVVVEKTSPPVPVEVGP
DVSTSSASQVIAPTQVTEINECTVNPDICGAGYCVNLPVGYTCLCFEGYRLNDQQTKCSD
INECTETPHLCSLGRCENTEGSFLCICPAGFMANEQGTDCVDVDECARPHTCGEGLCVNT
IGSYRCEYCDSGFRMNRNQCEDIDECSIPHTCPDAECVNSPGSYQCVPCRDGFRGWNGKC
HDINECQYSSLCTNGQCENLEGSFRCLCSQGYQLSPAGDQCEDVDECQQQQLCTNGQCRN
IAGSYRCICGQGYQLSPTKDHCEDINECQEENVCRGGDCVNTEGSYDCTCPDGFQLLPSR
GCQDINECAGSNLCLPHGKCLNTEGSFHCICEQGFIVSRDSRTCEDVDECANSTTCGTHG
FCENSPGSYRCLCYQGYQYLQDGRGCVDVNECEMLSGVCGEALCENVEGSFLCLCSDENQ
EYDPMTGQCRFRSSPDVPLETPADEKKECYYNLNDANFCDNVLTSNVTKQECCCTLGAGW
GDNCEIFPCPVLGSAEFTELCPEGKGFIPSEDPSYGAVAQSYKDADECQLFGQEICKNGF
CLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSYSCFCTHPMVLD
STEKRCIRPAESSEQTEETDVYQDLCWQHLSEEYVCNRPLVGKQTTYTECCCLYGEAWGM
HCALCPMKGSDDYAQLCNIQVPGSRRPYGQDALVDFEEEQYTPETDPYFVEDRFLNSFEE
LQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNELNNRMSLCKNA
KCINTEGSYKCVCLPGYVPSDKPNYCTPLNSDTDSELE
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggcttggctcaggtgggctttcctgctgtgcgcctgtgtctgtttgtccccagtgtct
gaggcttccgagaagggacgactgaggacgatcacctatgtgctgcgcccgggtcagtcg
ggcacctccggcagccgccggcagagcggagggcagcagcagcagcagcagcagcagcgc
acgttcaatgtggagctgaacacccgctacagcgcccgacgcagcagcaccttggagcga
actcgcaggatgagcaaagccagcggcagcggcgccagcgtgcagctccgcttgggcccc
agcgtgcaactccagcgcaagcctgcccagcacacgccagcctccttcagcaaagcgggc
aagctcgtcccgcgcgccaagctccagctgcgcgagagcaacagcagtgtgcaggttcac
cccaagtccaatctgcagcagctgcagggggtgaatgtctgtggagcgcagtgctgtcac
ggctggagcaaagctcctggctctcagaggtgcaccaaacctaactgttcaccgccatgc
caaaatggagggatgtgtctgcgaccacagctgtgtgtgtgtaaaccagggacaaaaggt
aacacttgtgaagataccactaagcaagaaactgcttcaccgggcggattgggtcctggg
actccaccctggcctattcctcaacgatctgttcagcagacctctttgtcaaagaaggtg
caggtccagcaaaaggtcaatcctatggcccagatgactttcacactcaagcagaaacct
tctgggggattaccgcaacaaatgcaatcacaaatgataccgctttcatcccaaaccttg
atgatgaatgtgcatcatggccaaactcaggaatatgtgctgaaaccgaagtactatcca
acaaagaaagtgatttcgggagaacaatctacagagagctcgttgcctttgagaataagt
caggatcttcttgcatcatcttttcagttgggtaatcacacgggacgcatcaaggtggtc
tttacacccagcatctgtacagtgacttgtaaaaaaggcacctgtcagaacagctgtgaa
aaaggaaacaccacgacactgattagtgaaaatgggcatgctgctgacaccttgacagca
accaacttccgagtagttgtttgccaccttccttgcatgaatggaggccagtgtagttct
agagacaagtgccagtgccctcccaattacactggtaaactttgtcagatcccagtgcaa
agtggtggtgctgcaaaactttatcataatccgcagcaggcaggcaaagctgtgggatca
catgtcatccattctacacatactctgccactgacaatgcccggacagcaaggagcaaaa
gtgaaatttcctcctaacattgtgaacatccatgtgaaacatccccctgaagctacagtg
cagttccatcaagtttcaaggattgacagcacgtcagcaggacaaaaagcaaaaccatcc
caatcaggacattctcaagtgtcttatcagagcctgccatttcagaagacccagaaagta
cattcaacctacacacatcagcaacccgtttctcacgtgtaccctgtttcggcaaaaacc
cagcttgggcgatgcttccaggagactattgggacacaatgtggtaaagcacttcctggc
ctttcaaagcaagaagattgctgtgggaccgtgggtacttcctggggttttaacaaatgc
caaaaatgtcccagaaaaccagcttaccctggatatagcccaatggtggactgcccacaa
ggttacaagagaattaatgctactttttgtcaagacattaatgaatgccagctgcaaggg
gtatgccctaatggtgagtgtttgaataccctgggcagctatagatgtacctgcaaaatg
ggatttgtgccagaccctactctttcaagatgcatccctgataatcccatggtcactgaa
gagaaagggccctgctaccggtttgtcagtgcaggaaagcagtgtatgcaccctctctct
gttcagctcagcaagcagctctgctgttgcagtgttggcaaggcctggggcccccactgt
gagaaatgtcccattccaggaacagctgcttttaaggaaatctgccctggtggaatgggc
tatacagtttctggctctcacaaaaacaagctatatcatcaaccttcagttagagttcag
ccacctgtcattggcaagacccagattactcaacatgttgctaaaggtacttctcctcca
cctctcccagcaaaggaagagccagtggaggcactgaccatctcacagaaaagtgagccc
gaggtgcctgtgcgagaagtgggaactgcagccccagatcaggaattagtttcacttgat
gaccgagaaaaacctggtcaacctcagctttctcctgggatttcaactattaacctgcat
ccacatttttcagtagtagttgaaaaaacgtctcctcctgtgcctgttgaagttggccca
gatgtttctacttcaagtgctagtcaagtaatagcaccaactcaagttacagaaatcaat
gaatgcacggtgaaccctgatatctgtggagcaggatattgtgttaacttgccagtggga
tacacctgcctctgctttgagggatacaggcttaatgatcaacaaacaaagtgttctgat
attaatgaatgtactgagactccccatctctgttcccttggacgctgtgaaaatacagaa
ggaagcttcctatgcatttgcccagcagggtttatggccaatgaacaaggaacagactgt
gttgatgttgatgaatgtgccagacctcacacttgtggggaaggtctctgtgtcaatact
attggctcatacagatgtgaatattgtgacagtggattccgaatgaacagaaaccagtgt
gaagacattgatgaatgctcaattccacatacctgtccagatgcagaatgtgttaattct
cctggttcttaccagtgtgtcccctgcagagatggattcagaggctggaacgggaagtgt
catgatataaatgaatgtcaatatagcagtctctgtacaaatggccagtgtgaaaacctc
gaaggatctttcagatgtctttgtagtcaaggttatcaactgtccccagcaggagatcag
tgtgaagatgtagacgaatgccaacagcagcagctctgcacaaatggacaatgcagaaac
atagctggatcctacagatgtatttgtggccaaggctaccagttatcacctacaaaagac
cattgtgaagatattaatgaatgccaggaagaaaatgtttgccgtggaggggactgcgtt
aatacagaaggctcttatgactgtacttgtccagatggcttccagctattaccttccagg
ggttgtcaagatatcaatgaatgtgcaggatccaatctctgtttacctcatgggaaatgt
ttaaatacagagggctctttccactgcatttgtgaacaaggctttatagtttctagagac
agtagaacatgtgaagatgtagatgaatgtgccaacagcactacatgtggcactcatggg
ttctgtgaaaattcacctggctcctaccgctgcctttgttaccagggttatcaataccta
caggatggaagagggtgtgtggatgtgaatgaatgtgaaatgctgagtggcgtatgtgga
gaagccctctgtgaaaatgtggaaggttcctttctgtgtctctgttctgatgaaaaccag
gagtatgacccaatgaccggacagtgtcgcttccgctcctcaccagatgtaccattagaa
accccagcagatgaaaagaaggaatgttactacaatctaaatgatgcaaatttttgtgat
aacgtattaacatccaacgttacaaaacaagaatgctgttgtactttgggcgctggctgg
ggtgacaactgtgaaatattcccatgtcctgtacttggaagtgctgagtttactgaactg
tgtcctgaaggaaaaggtttcataccctctgaagatccatcttacggagctgttgcacag
agctacaaagatgcagatgaatgtcagctttttggacaagaaatatgtaagaatggcttc
tgtttaaatacacagccaggctatgagtgttattgcaagcaaggcacatactacgatcca
gttaaactccagtgctttgatacagatgaatgtcaagaccccaacagttgtattgatggc
caatgcatcaacactgaaggatcatacagttgtttctgtacacatccaatggttctggat
tccacagaaaagcgatgcatcagaccagctgagtcaagtgaacaaactgaagaaactgat
gtctaccaggacctttgctggcaacacctgagtgaggagtacgtttgtaaccggcctctt
gttgggaagcagactacttacaccgagtgctgttgtttatatggcgaagcatggggcatg
cattgtgcactttgtcccatgaaaggctcagatgattatgcccagttgtgcaatattcaa
gttcctggatctcgcaggccatatggacaagacgcattggttgactttgaggaggaacag
tatactccagaaacggacccatactttgtggaagaccgtttcctgaacagctttgaggag
ttacaagcagaagaatgtggcattctgaatggatgtgaaaatggacgttgtgtaagggtg
caagaagggtatacctgtgactgttttgatggctaccatttggacatggccaaaatgaca
tgtgttgatgtgaatgaatgtaatgaactgaacaacaggatgtctctctgcaagaatgcc
aagtgcattaacactgaaggatcatacaagtgtgtgtgtctccctggctatgtcccttct
gacaagcccaactactgcacgcccctgaactcagacacagatagcgaactggagtaa
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integrated database retrieval system
