Candidatus Hodgkinia cicadicola Dsem: HCDSEM_144
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Entry
HCDSEM_144 CDS
T00938
Symbol
metC
Name
(GenBank) putative cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00270
Cysteine and methionine metabolism
hci00450
Selenocompound metabolism
hci01100
Metabolic pathways
hci01110
Biosynthesis of secondary metabolites
hci01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HCDSEM_144 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HCDSEM_144 (metC)
Enzymes [BR:
hci01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
HCDSEM_144 (metC)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACT34318
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All DBs
Position
105358..106572
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AA seq
404 aa
AA seq
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MSVGLNARLDHLKRVEACVDKPMADSTLLVKGFDDVASGFVNNAPAGGSTVLFRNSSEML
GGGSEFSYGTHASPSTRDLCCALSALEKAHVTLLTPSGLSALALTFLSLLAPGDHALVPD
AAYQPLRELCDCVLRGVGVDVDYYDQADERSLKALFRSTTKLVHLESPASGTFEVVDVDG
VCRHVKSRNSLCAISMDNSWATPLLFKPLAHGADVSITALTKYPAGASDVMMGSVSCVPW
VAQALQRHHALLGLCAGSADAWSVLRGLKTAKARLGVHHRVAVKVANALKASPRVGEVLC
PALSSSPYFELWKANYELTNGVIAFTLKSGIGERALEASRRFLDSLQVFGLGWSWGGYKS
LACVASLSHRRWPTRVTGALIRLQLGFEDERDLIWDLEGALAKT
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgttggtctgaacgcgaggctagatcacttaaagcgcgtcgaagcttgcgtcgac
aagccgatggctgacagcacgctgctcgttaaggggtttgacgacgtggccagtgggttc
gttaacaacgcccccgccggcggctctaccgttctcttcagaaactcgtcagaaatgtta
gggggtggaagcgagtttagctatggcacgcacgcctcgccttcaactagggacctgtgc
tgcgcgttgagcgctctagaaaaggctcacgtcacgctgttgacgccttccggcttgtca
gcgctggcgctgacgtttttaagcttgctggcgcccggcgaccacgcgctggttccagac
gctgcgtatcagcccctgcgcgagctttgtgactgcgtgcttaggggggttggggttgac
gtcgactactatgatcaagcggacgagagaagcttaaaggcgctttttagaagcaccaca
aagcttgttcacttggagtcgccggcttctggcacgttcgaagtcgttgacgttgacggc
gtgtgccgccacgtcaaaagccggaacagcttgtgcgctattagcatggacaactcgtgg
gctacgcctctgctgttcaagcctttagctcatggtgctgacgtgtcgataactgcgctc
accaagtatccggctggggcttcagatgtgatgatgggctccgtgtcttgtgttccgtgg
gttgctcaagctttgcagcgccatcacgcgctgctggggctttgcgccggctccgccgac
gcttggtcggttctaaggggcttgaagacagctaaagctcgcttgggcgttcatcaccgt
gtggccgtcaaagttgccaacgctttaaaggcgtcgcctcgcgtcggcgaggtgctgtgt
cctgcgcttagctcttcgccatacttcgagctttgaaaagccaactacgagcttactaac
ggtgtgatagcgtttacattaaaatctggcattggcgaacgggcgctggaagctagccgg
cgatttctcgactcgcttcaagtttttgggttaggctggtcgtgaggaggctacaagagc
ttggcttgcgttgcgagcttaagtcacaggcgctggcccacacgcgtaacaggggcgttg
attaggcttcagcttggcttcgaagacgagcgtgatcttatttgagatttggagggcgcg
ctagctaaaacttaa
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