Candidatus Hodgkinia cicadicola Dsem: HCDSEM_166
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Entry
HCDSEM_166 CDS
T00938
Symbol
metH
Name
(GenBank) putative B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00270
Cysteine and methionine metabolism
hci00450
Selenocompound metabolism
hci00670
One carbon pool by folate
hci01100
Metabolic pathways
hci01110
Biosynthesis of secondary metabolites
hci01230
Biosynthesis of amino acids
hci04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HCDSEM_166 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HCDSEM_166 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HCDSEM_166 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HCDSEM_166 (metH)
04980 Cobalamin transport and metabolism
HCDSEM_166 (metH)
Enzymes [BR:
hci01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HCDSEM_166 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ACT34338
LinkDB
All DBs
Position
complement(123814..127371)
Genome browser
AA seq
1185 aa
AA seq
DB search
MCYSLRNASSALKALTAISSKRALVLDGAMGTQIQKFKLKPKHYGVEASNGNNDALNMTQ
PKVVEGVHAAYAAAGSDVLSTNTFCSCSVSQADYGTPYSCSDLNARGCLIARRACLKAGF
AQARRVFVAGVLGPTNKSASIPADASRPSHRDVTFDDLVLSYRQQADALLASGADALLVE
TVFDTLNAKAGLKACIDASASYRKRRALVASATISDASGRTLSGQTIEAFWVSVKHANLA
GVGLNCALGPAQLSRHAAALALAAEAPIWVYPNAGLPNEMGKYTQGAKAFAHALKRCFGV
ASAVGGCCGSTPEHISELKALKPKSASRKKLRQPLAVCGTDLVLAPTTRLCKVSERANVA
GSSRFKTLIARKNYSEALEVVRAQACGGAHAIDVNFDDAMLDPKAEMCRFLSLLAAEPDL
AKMPVVIDSSSWDVLVAGMKLTQGRSIVNSISLKDGSEPFVSKAQTIKTLGCVPITIAFD
ELGQATTCERRLEICRRAFKLLTARAGYAPQDVIFDLNTFAVATGIPEHNANAAMLLKAI
KLVRCVFPSVTISAGVSNLSFAFRGDARIRRALHSAFLESARGAGLNMAIVNTQEASSGE
AATAEASQVCKALILNLRSVTPEEVIGAFASAGVPRRQASSAPTSWRSWSARARVAHAVV
SGTDKHVADDSVELAKSVGALAVVEGALMDGMSVVGKLFEKGKMFLPQVVKSARVMKKAV
QALAPMLAPREAAKPHTVVLATVKGDVHDIGKNIVATVLACNSFRIVDLGIMAASDAIVS
AAIAEDAVAIGLSGLISPSLDEMARVARKLQARGVTTPLLVGGATTSKLHTAIRLGPEYQ
GGVVIHVSDASKAVDVLTKLSSSNKAEFVALVKAEQALTAEVYARAKACEACVDHNKAAA
LSACSSQHPVKAPSFVGLKLACWACAGARYRTRSLARTPSNVLEAKASKIAERVSKLMEV
ESWVSVRCRVGVFRATASNNTIALLTAKNKPVFGVQAPRRQRGSCLSLSDFVSKPSALAG
AYCCVVGVEASLIQQFFVKGGKLQAAAAFKTACDALAETCSEQLTRAMRHSVWGFVDAST
QSLLKAGIAPAPGYPVWPDHSAKPKLARAIGAERATALAITSAWSLTPQSSVIAALLAGA
PAAYFGVDGVSKQQVAAHAKAAKASVSKTEAALTSALSYVPSYLT
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgtgctatagccttcgaaacgcgtcgagcgccctcaaggcgctgacggcgattagcagc
aaacgggcgctagtgctggacggtgcgatgggcacacagattcaaaaattcaaacttaag
ccaaagcactacggcgtggaggcgtcaaatggcaacaacgacgcgctcaatatgacgcag
cccaaagttgtcgagggggttcacgccgcgtacgcggcggcgggctcggacgtgctgtca
acgaacacgttctgctcgtgcagcgtgtctcaagccgactacggcacaccgtactcgtgc
tcagacctcaacgctagaggttgtttgatagcgaggagggcgtgcctcaaagctgggttt
gcgcaggcgcgccgtgtgttcgtagccggggtgctggggcctacaaacaagtcggcgtca
attccagcggacgcgtcaaggccctcacacagagacgtgacgttcgacgatctagtgtta
agctacaggcagcaagccgacgcgctgcttgcaagcggcgcggacgcgctgcttgttgaa
accgtgttcgacacgctaaacgccaaagctgggcttaaagcgtgcattgacgccagcgcc
agctatcggaagcgtcgcgcgcttgtggcgtcggcaacaataagcgacgcgtcgggcaga
acgctgtccggtcaaacaatagaagcgttttgagtgtcagtcaagcacgcaaacctagca
ggtgttggtttgaactgcgcgctgggaccagctcagcttagcaggcacgcagccgcgcta
gcgctagcagccgaagcgccaatttgggtgtacccaaacgccggcttaccaaacgaaatg
ggcaagtacactcaaggcgccaaagcgtttgctcacgccctcaagcgctgctttggcgtt
gccagcgccgtgggcggatgctgtgggtcaacgccagaacatatttcagagctgaaggcg
ctaaagcccaaaagcgccagccgcaagaagctgcgccagccgctagcggtctgcggcaca
gacctggtgctagcgcccacaacgaggctttgtaaagttagcgaaagagctaacgtcgcg
gggtcgtcgcgtttcaagacgctgatagcacgcaaaaactacagcgaggcgctggaggtt
gttagggcgcaagcatgcggcggggctcacgcgatagacgtcaacttcgacgacgccatg
ttggatccgaaagcggaaatgtgtaggtttttaagcttgctggcggctgagccggatttg
gccaagatgccagtagtaatagactcgtcgagctgagatgtgctggttgcgggcatgaag
ctaacgcaaggtcgaagcatagtcaactcgatatctcttaaagacggcagcgagccgttc
gttagcaaagctcaaacaattaaaacgcttgggtgcgtgcccataactatagcgttcgac
gagctggggcaagccacaacgtgcgagcgcaggcttgaaatctgcaggcgagctttcaag
ctgctgacggcgcgcgcgggctacgcgccccaagacgtcatctttgatttgaacacgttt
gcggtagccacaggcatcccagaacataacgccaacgccgcgatgcttttgaaagccata
aagctcgttaggtgcgtgtttccaagcgtcacaatatcagccggcgtttccaacttgtct
tttgcgtttagaggtgacgccagaatcaggcgagcgcttcatagcgccttcttggaaagc
gccagaggcgctggcttaaacatggcgatagtaaacacccaagaagccagcagcggcgag
gcggccacagccgaagccagccaagtttgcaaggcgctaatcttaaacttgagaagcgta
acaccggaagaagtgattggcgcgtttgcttccgccggcgtgccccggcgtcaagccagc
agcgcgccgacaagctgacgaagctggagcgcgcgcgcgcgagtggcgcacgccgtggtc
agcggaacagacaagcacgtagcagacgacagcgtggagctggcgaagagcgtgggcgcg
ctagcagtcgtcgaaggcgcgttaatggacggcatgtcggtggtgggcaagctgtttgag
aagggcaaaatgtttctgccccaagttgttaagtcagctcgcgtgatgaaaaaagcagta
caagcgctggcgccaatgctagcgccgcgcgaagcagcaaagccccacactgtggtgttg
gccacagtgaaaggcgacgtgcacgacataggtaaaaacatagtagcaaccgtgctggcg
tgcaacagctttagaattgtagatttggggatcatggcggcgagcgacgccatagtcagc
gcggcgatcgccgaagacgccgtcgccatagggctgtctgggctgatttcgccttcacta
gacgagatggcgcgagtagcgcgcaagctgcaagctcgcggcgtcacgacgccgctgctg
gtggggggagccacaaccagcaagctgcacacagccattagacttgggccagagtatcaa
ggtggagttgttattcacgtttcggacgccagcaaggccgtcgacgtgctaaccaagctt
tcgtctagcaacaaagctgagtttgtggcgctcgtcaaagccgagcaagcgctaacagct
gaagtatacgccagagccaaagcatgcgaagcgtgcgttgaccacaacaaggctgcggcg
ctgtcggcgtgctcaagccagcacccggttaaggccccaagctttgtaggcctgaagcta
gcgtgttgggcgtgcgcgggcgcgcgttatcgcacgcgctcgctagcgcgcacaccatct
aacgtgctggaagcgaaagctagcaagatagcagaaagagtttcaaagctaatggaagtc
gaaagctgagtgagcgttaggtgccgggtgggcgtgtttagggccacagcttccaacaac
acgatagcgctgctaacggcaaaaaacaagcccgtgtttggagtgcaagcgccaagacgc
cagcgaggctcgtgtttaagcttgagtgacttcgtcagcaagccatcggcgctagcgggc
gcatactgctgtgtggtaggcgtcgaagcttcgttaatacagcagttttttgtaaagggg
ggcaagcttcaggcagccgcggcgtttaaaacagcgtgtgacgcgctagctgagacatgc
tccgagcagctgacgcgcgcaatgaggcatagcgtgtgggggtttgttgacgcgtcgacg
cagtcgcttttaaaagctggcatagcgccggcgccgggctatcccgtttgaccagaccac
agcgcaaagccaaagctagcacgcgcgattggcgcggagcgcgccacggcgctagcgata
accagcgcgtgatcgctaacaccgcagtctagcgtgatagctgcgctgcttgctggcgcg
ccagcagcctactttggagttgacggcgtcagcaagcagcaagtagctgctcacgcaaaa
gcagccaaagcgagcgtcagcaagacagaggcggcgttgacgtcggctttaagctacgtg
ccaagctatttgacgtag
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