Hydrogenimonas cancrithermarum: HCR_08620
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Entry
HCR_08620 CDS
T09533
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj00540
Lipopolysaccharide biosynthesis
hcj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HCR_08620 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcj01005
]
HCR_08620 (lpxC)
Enzymes [BR:
hcj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HCR_08620 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hcj01005
]
Lipid A
HCR_08620 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
BDY12550
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All DBs
Position
complement(857437..858324)
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AA seq
295 aa
AA seq
DB search
MIKQRTIAKPVESVGIGLHKGKPVHLRLEPLEAGSGIVFYREDLGVSIPLRPEYVVDTQM
ATVIGKDGANVSTIEHFLSAVYAYGIDNMRVILDDAEMPIMDGSAASFCMMLDEAGMAEQ
NAGKEILRIRKAVTVRSGEKYVSLKPSETASFDFLIRFEHPVIAEQHRRFIFSKSAFVQE
ISRARTFGFLKEVQYLRSKNLALGGSLENAIVLDDTKVLNPEGLRFEDEFVRHKILDAMG
DMKLLGRPILGAYEAFAGSHGLNHQLTVALLADESAYEIVTLQVEESAEFARSFA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacagcgaacgattgccaaaccggtcgagagcgtcggaatcggtctgcacaaa
gggaaaccggttcatttgcgtctcgagccgcttgaagcgggaagcggaatcgtcttttac
agagaagatctcggcgtctcgataccgcttcggccggagtatgtcgtcgatacacagatg
gcgacggtgatagggaaagatggcgcgaacgtttcaacgatcgagcattttctatcagcc
gtttatgcctacggtatcgacaatatgcgtgtcatccttgacgatgccgagatgccgatc
atggatggaagcgccgcgagtttctgcatgatgctcgatgaagcgggaatggcggaacaa
aatgcgggcaaagagattcttcggatcagaaaagccgtaacggtacgttcaggcgaaaag
tacgtctctctcaaaccgtccgaaacagcgagtttcgattttctgatccggttcgaacat
cctgtcatcgctgagcagcaccgacgatttatcttctcgaaaagtgcgtttgttcaggag
atttcccgtgcgaggacgtttggttttctgaaagaggtacagtatttgcgaagcaagaac
ctggccctgggcggaagtcttgaaaatgcgatcgtccttgacgatacgaaagtactcaat
cccgaagggctacgtttcgaagatgagtttgtacgtcataaaattctcgatgcgatggga
gacatgaaactgcttggccggccgattctcggtgcatatgaggcgtttgcaggaagccat
gggctcaaccatcagctgactgtcgcactgcttgcagatgagagtgcctacgaaattgtg
acgcttcaagtggaagagagtgccgaatttgccagaagcttcgcctga
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