Halomonas chromatireducens: LOKO_02265
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Entry
LOKO_02265 CDS
T04292
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00270
Cysteine and methionine metabolism
hco00450
Selenocompound metabolism
hco01100
Metabolic pathways
hco01110
Biosynthesis of secondary metabolites
hco01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LOKO_02265 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LOKO_02265 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hco01007
]
LOKO_02265 (patB)
Enzymes [BR:
hco01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LOKO_02265 (patB)
Amino acid related enzymes [BR:
hco01007
]
Aminotransferase (transaminase)
Class II
LOKO_02265 (patB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AMD01325
UniProt:
A0A0X8HEY2
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Position
2391693..2392886
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AA seq
397 aa
AA seq
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MEFDFATPVERRHPEQGKRPSQQWPSQKWHRHDDRVLPLWVADMDFQSPPAVIAALRARV
EHGVYGYGMVPDSLRKTLCEWSAREYGWAIEPEWQLWLPGVVPALHLASLALTEPGDGVL
TITPIYPPFLKVAERTGRLPQRAAMAPPQVSGEQWRLDIEALEAAVTPRTRLLLWCHPHN
PTGRVWRHEELAALAELVERYDLLLVSDELHCDLLLDEGASHRPLAAAFPELAARTITLW
APSKTFNLAGLTTACAVIENESLRHRFAAALRGLMPDSNVLGLVAAEAAYAHGDPWRRAL
IEVLRGHRRTLVDRVAAWPGVALSVPQSTYLAWLDLRGAEGLAGKTGSPQQVLLEEVGVA
LSDGSDFGWPGFVRLNFGTTAAQLDEALARLDGVLKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgattttgccacgcccgtcgagcgtcgccaccccgaacagggaaagaggcct
tcacaacagtggccttcacagaaatggcaccgccacgacgacagggtgctgccactgtgg
gtcgccgacatggattttcaatcaccgccagcggtcatcgcggcgttgcgggcccgcgtc
gaacacggcgtctacggctatggcatggtacccgactcgctacgcaagactctatgcgag
tggagcgccagggagtatggctgggcgatcgagcccgaatggcagctctggctccccggc
gtggtgccggcactgcatctggccagcctggctctgaccgagccgggtgacggcgttttg
acgatcacgccgatctacccacctttcctcaaggtggccgagcgcacagggcggctgccc
cagcgagcggcgatggcgccaccgcaggtgtcgggcgagcagtggcgcctcgacatcgag
gcgctggaagcggccgttaccccacggacccgactgttgctgtggtgtcacccccacaat
cctactggccgggtctggcgtcacgaggagctggctgcactggcggaactggtggaacgc
tacgacctgttgctggtctccgatgagctgcactgtgacctgttgctggacgagggtgcc
agccatcgcccgctggcggctgccttccccgagctggctgcccgcacgatcactctctgg
gcgccttccaagaccttcaatctcgccggacttaccaccgcctgtgccgtgatcgaaaac
gagtcgctgcgccaccgctttgcagccgcccttcgtggattgatgcctgacagcaacgtg
ctcggccttgtggccgccgaagcggcctatgcccatggcgatccctggcgccgggcattg
atcgaggtgctacgcggtcatcgacgcaccctggtcgatcgggtggctgcctggcccggc
gttgctctgagtgtgccccagtccacctacctggcatggctggacctgcgtggcgccgaa
gggctagccggaaaaacgggctccccccagcaggtgctattggaggaggtaggggtggcc
ctctccgatggcagcgatttcggctggccggggttcgtgcgtctcaacttcggcaccacc
gccgctcagctcgatgaggccctggcccgactcgacggtgtgttgaagggatga
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