Helicobacter cinaedi PAGU611: HCN_0595
Help
Entry
HCN_0595 CDS
T02034
Name
(GenBank) cytoplasmic pump protein of the hefABC efflux system HefC
KO
K18138
multidrug efflux pump
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp01501
beta-Lactam resistance
hcp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HCN_0595
01503 Cationic antimicrobial peptide (CAMP) resistance
HCN_0595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcp02000
]
HCN_0595
01504 Antimicrobial resistance genes [BR:
hcp01504
]
HCN_0595
Transporters [BR:
hcp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HCN_0595
Antimicrobial resistance genes [BR:
hcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HCN_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
BAM14983
LinkDB
All DBs
Position
606704..609772
Genome browser
AA seq
1022 aa
AA seq
DB search
MYKFAITRPITTLMFAFAILFFGFLGVKKMPTSLFPDIDFPVAVVITSYPGASAEIVETK
VTDKIEEAVMGIDGIKKVTSSSARNVSMVIVQFELEKPLDSAVNDVRDKVGSLQLDSGVK
TPSINKFDSSSMPIVSIFLTSDKVSSAELMRHAKDNVKPLLQKISGVGGVEMRGHRERQI
RIFVSPSMLNKYGLTYTDISNKIGLENLEIDGGRLIGTLQEWVITTDAQSTDLSDVGNIR
VAEGIRLGDIATIEDGIEEDKTFASLNKTPGVIFEVQKISGANDIAIADAVMKVLPQIEA
ISPDYEVRAFKDTTQNVRSAIASVEFDVLLGVFLAVFVVFIFLRSGTITLVSAISIPISI
FGTFALMNFFGFSLNMLTLLAVALAIGIIIDDAIVVIENIHKKLESGMRKREAAYEGVRE
IGFALIAISAMLLSVFIPVGSMSGIVGRFFQSFGITVAAAIGISYIVVITIIPMVSSIVV
NPKYSRFYYRTEPFFKALDGYYVKTLAFVLRNKIKVIVGVIGVFFLSIMLLAKIGMEFII
PDDKSEFQVFLETKPGISMSAMKEKTGILQDIVMANENVEFTSLQIGYTNEKNIFKAQIY
ARLKPIKDRKLSQFEIMAEVGEKLKSSELANEFVISLSEVSDMGGGDNSPYQVAILAPSD
EALHKSKDNLIALLKNDPTLAGKVDNIHINAADNLPEYRLRVLKQNASRYGVSAKEIGNV
VRGAFSGEAAIGYYKERGKEYDITIRVPDTDRISINDIKKLQVKNGNGELMFVEGLVEIE
STTAPSVITRLDRQRSLTVYAYPVKYSGISLGDMMKITAQKQGEWLESGATFRLQGEAEN
AQEMMIAFLVAVLTAIVLIYLILAALYESFLQPIVIMMTLPFSFSGAFIALFVVGQPFSM
FSLMGLMILMGLVGKNATLLIDVANEKRKEGYSTDEALILAGESRLRPILMTTIAMVFGM
IPLAISVGSGAGMKSPMGICIIGGLLFSMFLSLLIVPALYRLLVPIDDWLQRFYKPKAED
KF
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtttgccattactcgtcccattacaactttaatgtttgcttttgcgattttg
ttttttgggtttttgggtgtaaaaaaaatgccaacttcacttttcccggatattgatttt
cctgtggctgtggtgattacaagttatccgggagcaagtgcggagattgtagagacaaag
gtaactgataagattgaagaagcggttatggggattgatgggataaaaaaagtaacttca
agctctgcaagaaatgtaagtatggttattgtgcagtttgagttagaaaagccccttgat
agtgcagtgaatgatgtgcgagataaggtggggtctttgcagctagattctggagtaaag
acaccaagtatcaataaatttgatagctcttctatgccgatagtttcaatttttcttaca
agtgataaggtgagttcagccgagcttatgcgacacgctaaggataatgttaagccatta
ttgcaaaaaatatctggcgttggtggcgtggagatgagagggcatagggagcgacagatt
agaatctttgtaagcccaagtatgctaaataaatatgggttaacttacacagatatttca
aataaaatagggctagagaatcttgagatagacggcggtaggcttattggtacattgcaa
gagtgggtgattaccacagatgcacaaagcacggatttaagcgatgtggggaatatccgc
gtggctgaaggcattagattgggggatattgcaactattgaagatgggattgaagaagat
aagacttttgcgtctttaaataaaacgcccggtgtgatttttgaggtgcaaaaaatttct
ggggcaaatgatattgccattgctgatgcggtgatgaaagtgctgccacagattgaagct
atcagccctgattatgaagtaagggcattcaaagatacgacacaaaatgttcgttcagcc
attgcttctgttgaatttgatgtgcttttaggggtatttttggcggtgtttgttgtgttt
atcttcttaagaagtgggacgattacgcttgtatcggctatcagtattcctatttctatt
tttgggacttttgctttgatgaatttttttggattttcactcaatatgctgacacttctt
gcggtggctcttgctattgggattatcattgatgatgcgattgttgtgattgagaatatc
cataaaaagctagaatctggtatgcgtaagcgtgaggcagcctatgagggtgtgcgtgag
attggctttgcactcattgccatttcagctatgttgctttcagtatttatccctgtggga
agtatgagcggaattgtggggagatttttccaaagctttgggataaccgtagccgcagct
attggaatctcatatattgttgttattaccattatccctatggtttcttcaattgtggta
aatcccaagtattcaagattctattatcgcacagaaccattttttaaagcacttgatggc
tattatgtcaaaacccttgcttttgtgttgcgaaataagattaaggtgattgtgggcgtt
attggcgtatttttcttatctattatgctactagctaagattggtatggagtttattatc
cctgatgataagagtgagtttcaagtctttttggagacaaagcccggtattagtatgagt
gcgatgaaagaaaaaacaggaatcttgcaagatattgttatggcaaatgagaatgtggaa
tttacttcattgcaaattggctatacaaatgaaaaaaatatctttaaggctcaaatttat
gcgcgtttaaagcctattaaagatcggaaactttcgcaatttgaaattatggcagaggtg
ggcgaaaagcttaaaagtagtgagttggctaatgagtttgtcatctcactatcagaagtc
tccgatatgggtggaggggataactccccttatcaagtagctattctcgcaccaagtgat
gaagcattgcataagtcaaaagataatctcattgcattgcttaaaaatgaccctactctt
gcaggaaaggtagataatatccatatcaatgctgcggataacttgcctgaatatcgtttg
cgggtgctaaagcagaatgctagtcgctatggtgtgagtgcaaaagagattggtaatgtc
gtgcgaggggcattctctggggaagcggcgattgggtattataaagagcgtgggaaagag
tatgatattactatacgcgtgcctgatacagatagaatctccattaatgatattaaaaaa
ctgcaagtgaaaaatggcaatggtgagttgatgtttgtagaggggcttgtggagatagaa
tctacaaccgctccttcagttattacgcgtcttgataggcaaagatcgctaaccgtgtat
gcttatcctgtaaagtattctggaatctctttgggcgatatgatgaaaattaccgctcaa
aagcagggtgagtggcttgaatctggagcgacttttagacttcaaggtgaagcagaaaac
gcacaagaaatgatgatagcttttcttgtagcggttttaacggctattgtgcttatttat
cttatccttgcggcgttgtatgagagctttttgcagcccattgttattatgatgaccttg
ccttttagcttttctggtgcatttatcgcactctttgttgtgggacagcctttcagtatg
ttctcgcttatggggcttatgatacttatggggcttgttggaaaaaatgcgactttactc
attgatgtggcaaatgagaaaagaaaagaggggtatagcactgatgaagcacttatcctt
gctggagaatctcggctacgacccattttgatgacaacgattgctatggtgtttggaatg
atacctttggctatttctgttggctcgggtgctggtatgaagtcgcctatggggatttgt
attattggagggctacttttctctatgtttttgagtttgcttatcgttcctgcgttgtat
cgattgcttgtgccaattgatgattggttgcagagattctataagcctaaggcggaagat
aagttttaa
DBGET
integrated database retrieval system
