Hippocampus comes (tiger tail seahorse): 109511263
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Entry
109511263 CDS
T04969
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein-like isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109511263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109511263
Membrane trafficking [BR:
hcq04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109511263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
109511263
NCBI-ProteinID:
XP_019717757
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MISSPDLLPFTVPEGFGDPEDGEAEGARGPAGGLFPEEFSVPPPPRCGGHPWSSAAAFHK
DFVLVAEFSEQVGPTPVMTIPDEAGACGSLDLNHFSVRIMSVDYQASGPGGPSPAASGPR
LNFNEDSEVVLGDSADWAFAYVRHVTLLDLAARGMVRPFCLAYVCSQQAKIMDNFGRLSA
GFRRAADSLKTGNRQAFSLELHSKLHQLQYERLALLRDDGIGEKREKLEALERAMEMHKE
LLRQVASYPNRKLKRPDFLPYEPADAWTDAPAAPPPAGRIVGSERRLKPIQELCNGYYLS
LMTEQLAQTEVRLRGDVTALRGASITRSLKRKLKLTNFLFEQPEDEEEEEEDDGEEEMLR
ERGNQPSSESCAEAEEVASGEMTGSISSGDSIQVIGTERSYRTLAAAGACDAAPSVAANG
APPPGPLEQALSVPSATTGVWLATRDTPPPSYDSPPVTASDPRRLRVYAGRANSEDSIEV
LSTTESIVPEDLAAITEEEPTKDDEMAGTAKNAHAGSADQTPPNFPVERRSSSQSGKEAR
SGGAGRRRKRGAPWDKAGLLAQRFTKQHSFSQHVVFCLLSGRPLVLLSGDEGKLRKTVDA
LTLFLPAPAGAVVPCLRAPLQLGDLLAWRLIGFHRSQSSGPLHWLSRYSRYLGVLDLDQR
TLRCPSYSGSLVGSLVGSAVPAAAFLPHMQSGLTALVNRALLFTFARRGEEDDGPDAGDL
AVMRFLSDLIKRRHAARGPPALRFSYVALRLHKNTTAA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgatctcctctccggacttgctgcctttcaccgtgccggagggcttcggcgaccccgag
gacggcgaggcggagggagcgcgcggcccggcgggggggcttttccccgaggagttctcc
gtgccgccgcccccccgctgcggcggccacccgtggagctccgcggccgcctttcacaag
gacttcgtgttggtggccgagttctccgagcaggtggggcccacaccggtgatgaccatc
cccgacgaggcgggcgcctgtggctccctggacctgaaccacttctctgtgcgcatcatg
tctgtggactaccaggcgtcgggcccgggaggaccttcgccagccgcgtccgggccgcgc
ctcaacttcaacgaggactcggaggtggtcctgggggactcggccgactgggcctttgcg
tacgtgcgccacgtgacgcttctggacctggcggcccgcggaatggtgcgtcctttctgc
ttggcctacgtgtgctcgcagcaggccaagatcatggacaacttcgggcggctgtcggcc
ggctttcgccgggcggccgacagcctcaagacgggaaaccggcaggccttctccttggag
ctgcacagcaagctgcaccagctgcagtacgaacgcctggccctgctgcgggacgacggc
atcggggaaaagcgcgagaagctggaggcgctggagcgagctatggagatgcacaaagag
ctcctccgccaggtcgcttcctaccccaacaggaagttgaagcggcccgacttcctgccc
tacgagccggctgacgcctggacggacgcacccgccgcgccgcctcccgccggccgcatc
gtcggctccgagcggcggctgaagccaatacaggaactctgcaacggctattacctgtca
ctgatgactgagcagctggcgcaaacggaggtccgcctccgcggcgatgtcaccgccctg
cgaggtgcgagcatcacgcgctcgctgaagaggaaactcaaattgaccaacttcctcttt
gagcaacccgaggatgaggaagaggaagaggaggacgatggagaggaggagatgttgagg
gaaaggggaaatcagccgagctccgagtcctgcgcggaggcggaagaagtggcgagcggc
gagatgacgggaagcatcagcagcggagacagcatccaagtgatcggcaccgagcgatcc
tacaggacgctggcagccgccggggcgtgcgatgctgcgccgagtgtcgccgccaacggc
gcgccgccccctgggcccctcgaacaagctctctcagtcccttcggccacgaccggcgtt
tggctcgccacccgcgacacgcctcccccctcctacgattcgcctcccgtgaccgcctcg
gaccctcggcgcctcagagtctacgccgggagggccaacagcgaggacagcatcgaggtc
ctcagcaccaccgagtccatcgtccccgaagaccttgccgccattaccgaggaggagccg
accaaagatgacgaaatggccggcacggcgaagaacgctcacgcgggcagcgctgatcag
acgccgcccaatttcccggtggagcggcggtcttcatcgcagagcggaaaggaggcgcgg
agcggcggcgccgggaggcggaggaagcgcggcgcaccctgggacaaggcggggctactg
gcgcagcgcttcaccaagcagcactccttctctcagcacgtcgtcttttgcctgctgagc
ggccgtcctctggtgctgctctcgggagacgaaggcaaactgaggaagacggtggacgct
ttgaccctcttcctgccggctcccgccggcgccgtcgtgccgtgtttgcgcgcgccgctg
cagctcggcgacctgctcgcgtggaggctgattggatttcacaggtctcagtcctcgggc
ccgcttcactggctcagtcgctacagtcgctacctgggcgtgctcgacttggaccagagg
acgctgcgctgcccgtcttactcgggttcgctggtgggctcgttggtgggctcggccgtg
cccgccgccgccttcctgccgcacatgcagagcggcctgacggcgctggtgaatcgggcg
ctgctgtttacgttcgcccggcgaggagaagaggacgacgggccggacgccggcgacctg
gccgtgatgcgtttcctgtccgacctcatcaagcgccggcacgccgcacgcgggccgccg
gcgttgcgcttctcctacgtggcgctgcgcctgcacaagaacactactgctgcatag
DBGET
integrated database retrieval system
