Hippocampus comes (tiger tail seahorse): 109512505
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Entry
109512505 CDS
T04969
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04110
Cell cycle
hcq04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109512505 (rb1)
04218 Cellular senescence
109512505 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcq01009
]
109512505 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109512505 (rb1)
Protein phosphatases and associated proteins [BR:
hcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109512505 (rb1)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109512505 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
DUF1484
Motif
Other DBs
NCBI-GeneID:
109512505
NCBI-ProteinID:
XP_019719867
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MPPQRRSAGMSQNKETKKRPESSSTDFKTSTELSVKKHRDKDADFVTLCTSLHVSDLVCD
RTWKMYKGLQESLDEFAEDQKRLWAASLFAVVTDMDAASFTVTQVLKAVSMNLKQFLALV
RKLDINLDTISTKVNSALTRLDNKHDVTLALYQKFEKTCKKIFAEAPESKESEITRTCWT
MFLLAKGKALQMEDDLVISFQLLLCTLELFIKRCPPDMLQPLYQSAISKVQIPVTRTSRR
NQNNAKARPVVPEVDMQLLETLCKENQCNVDEVKNVYQTSFSAFLVSLDLLKAPGLPQAS
SINQQYEEHYLKSRDIDARLFLDSDETLVAPKVDPVQVERTPKKNMLEEDAMPIHQTPIR
AAMNSIQQLRGDLISRGDRPSTNLVTYFKNCTVDPTRDVLKRLETMGPKFSQRFAEAVGP
RCITLGKQRFTLGVKLYYKVMEAMLKSEEKRLSVQNFSKLLNDPTFHTSLLACALEVVMA
TYGESSFKTGGYNNGRCGGIPGEADLCFPWILDVLNLSAFDFYKVIESFIKADVTLSKDI
VKHLETCENLIMERIAWKTDSPLFELLKQEHEGGAVEQAEAPASFNQPLQHNHTAADLYL
SPVRPCLRIVPPESPATAGAPAAAPAPSQPAPQAAGQNPRHLKSNSLSLFYKKLYRLAYT
RLKMLCSYLLSPYPELEPIIWTLFQHTLQHKYELMRDRHLDQLMMSAMYAICKVKSVDLR
FKAIVSSYKNMPNTNQETFKHVLIAEDHYDSIIVFYNQVFMQRLKTNILQYASTRPPSLS
PIPQIPCSPYKFPSSPLRVPGSSNVYISPMKSTRSPGIMTPRSRMLVSIGESFGTPNRFQ
KINQMVSSGDRSLKRTSDHGGAPKILKRLRFDVDGQDEPGGSKSDGDSTLIQRLNDLTSA
RNRMQEQKMKEDAESRKEHH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcagaggcgtagtgccggcatgagccaaaacaaagagacgaaaaagagacct
gaaagttcctctacggactttaaaacgagcacggagttatcggttaaaaagcacagagac
aaggatgccgacttcgttactctgtgcacaagccttcatgtgtccgatctggtttgtgac
cgtacttggaagatgtacaaaggtctacaggagtccctggatgaatttgctgaggatcaa
aaaaggttgtgggctgcctctttgtttgcggttgtgaccgacatggatgctgcttccttc
accgtaactcaggtcctaaaagcagtctctatgaatttaaagcagtttctggctctggtt
cggaagttggacatcaacttggacacaataagcaccaaggtcaattcagcgctgacacgc
ttggacaacaaacatgatgtgaccctggctctttaccagaagtttgagaagacatgcaaa
aagatctttgctgaggcccccgagtcaaaggagagtgagatcacacggacctgctggacg
atgtttcttttggccaaaggaaaggccttgcagatggaggatgacctggtcatatcgttt
cagttgctgctgtgcacgctcgagttattcatcaagagatgcccccctgatatgctccag
cctctttaccaatcagccatcagcaaagtccaaatccccgtcacccgaacgtcacgtcgc
aaccaaaacaatgccaaagcgcgccctgtggtgccagaggtggacatgcagcttcttgaa
accttgtgcaaggagaatcaatgcaatgtggatgaggttaaaaatgtctatcagaccagt
ttctccgccttcctggtgtctctggatcttctcaaagctcccggtcttcctcaggccagt
agcatcaaccagcagtatgaagagcactacctcaagagtcgagacattgacgcgcgattg
ttcttggacagtgacgagacacttgttgcgcccaaagtggatccggtacaagtggagaga
acgcccaagaagaacatgctggaagaagatgccatgcccatccaccagactccaatcaga
gccgcgatgaactccattcagcagttgagaggagatctcatttctcgtggcgaccggccg
tccaccaacttagtgacctatttcaagaactgcaccgtggacccaactcgggatgtcctg
aagcgcttggagacaatgggaccaaaattcagccaaaggtttgctgaggcagttggcccg
cgctgcatcactctcggaaagcagaggtttacacttggtgtcaaactctactacaaagtc
atggaggcgatgctaaaatcggaagagaaacgactttctgtgcaaaatttcagtaaactc
ctcaatgacccgacattccacacatcactcttggcttgtgcactggaggttgtcatggca
acatacggagagagcagttttaagaccgggggatacaataatggccgttgtggtggcatc
cctggcgaagcggacctgtgctttccgtggatactggatgttttgaacctcagcgctttt
gacttctacaaagtcatcgagagttttatcaaagcagatgtgactctgagcaaagacatc
gtcaagcatcttgagacctgcgagaacctcatcatggaacggatcgcatggaagacggac
tcccctctcttcgagctgttgaagcaggagcacgagggcggcgcagtggaacaagcggag
gcgcctgctagtttcaaccagcccttacaacacaaccacaccgctgctgacctgtacctg
tcccccgttcgcccgtgtcttcgcatcgtgcctcccgagtcccccgccacggccggcgca
ccagctgccgctccggcaccgagccagcccgcaccccaagccgcgggccagaaccctcgg
cacctgaagtccaactcactcagcctcttctataaaaaattgtaccgcctggcctacacc
aggctgaagatgctctgctcctatctgctgtccccctatccggagctggagcccatcatt
tggacgctcttccagcacactctgcagcacaagtacgagctgatgagagatcgtcacctc
gaccagttaatgatgtcagccatgtatgccatatgcaaagtgaagagtgtggatctgcgc
ttcaaggccatcgtgtcgtcgtacaagaacatgcccaacaccaaccaggagactttcaag
catgtgctgatcgcagaggaccactatgactccatcatcgtcttctacaatcaagtgttc
atgcagaggctgaaaaccaacatcctacaatatgcatccacaagaccgccttctctctct
ccgatcccacaaatcccgtgcagcccttataaatttcccagttcccctctgcgtgtgccc
ggaagcagcaacgtgtacatctcgccgatgaagagcacccgctccccgggcatcatgact
cctcgcagcagaatgctggtttccatcggtgaatcatttgggacgccaaatcgcttccag
aagatcaaccagatggtcagcagcggcgatcgctctttgaagagaacctcagatcacgga
ggcgcccccaaaattctgaagaggttacgatttgatgttgatgggcaagatgagcccggt
ggcagcaaatccgatggagattcaacactgatccagaggctcaacgatttaacctccgcc
cgcaatcgcatgcaggaacagaagatgaaggaggatgcggaatcccgaaaggagcaccat
taa
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