Hippocampus comes (tiger tail seahorse): 109512987
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Entry
109512987 CDS
T04969
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109512987
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109512987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
IQ
PKD_channel
TraI_2B
Lustrin_cystein
Eap1
TMCO5
Motif
Other DBs
NCBI-GeneID:
109512987
NCBI-ProteinID:
XP_019720721
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MAPLLPPPGADAFRPFTRESLAEIERLQAEKRNKAARVDGHEAAEVEEEEAAAAPNADLE
AGKSLPWIYGDPPAEMINTPLEDLDPFYRAQKTFIVLSKGNTIYRFNAEPACYLLSPFSS
VRRGAIKILIHSLFSMFIMITILSNCVFMTMSNPPAWSKNVEYAFTGIYTFEATVKVLSR
GFCVGSFTFLRDPWNWLDFMVISMAYITEFIDLGNVSALRTFRVLRALKTITVIPGLKTI
VGALIQSVKKMVDVMVLTVFALAVFALVGLQLFMGNLRHKCVRWPISGNDTGEWFNVTNP
LVLYNETIGINSSDYSNSTFDFVEYIENSENYYFLEGSKGPLVCGNSSDAGVCPEGFTCM
KAGGNPDYGYTSFDSFGWAFLALFRLMTQDYWENLFQMILRAAGKTYMLFFVVVIFLGSF
YLINLILAVVAMAYDEQNQATLREAKEKEEEFQRILEQLKSQEQSQHSGSRESLKSSKSP
SRRSASELSLEHDAAVNDCNGKMVPTLIVRSPTMVVRHDDEELREKSPGMLDPEELHTDE
HSQRQRSTSAMEELEDAQRPCPPGWYKFANIFLKWNCCKPWLALKKWLYVIVMDPFFDLA
ITICIVLNTLFMSMEHYPMTHEFDEMLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQVGWN
IFDSIIVTLSLAELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKNYKDCVCKISDECELPRWHMNDFFHSFLIVFRILCGEWI
ETMWDCMEVSGAGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSTADDDGELNNLQ
IAVGRITRGIDWLKAAAAEIPRRILDKNPEATEDDNTEAVEMNDLDTGGDVRKVDGIANC
LAPGRTPGAVMDGELARSVPIAQGESDFENPDDDDDDYDSNASTCGESLHDEESLEDDLG
LIKEVKLMGVATEDSDVSLCSTADYQPPDPEPEEEEEEEPEPVDPEACFTDNCVRRWPCL
TVDVDTIGGKRWWKLRKTCFAIVEHDWFESFIIFMILLSSGALAFEDIYLERRRIIKIIL
EYADKVFTFVFVVEMLLKWTAYGFKTYFTNAWCWLDFFIVDVSLISLVAHWLGFSELGPI
KSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVTMFAGK
FYRCVNTTSQERFDVTEINNRSECLALQEATGEARWVNIKVNYDNVGKGYLSLLQVATFK
GWMDIMYAAVDSREVEEQPSYEINLYMYVYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
LGDKDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPTNVLQGLVFDLISQQFFDIFIMVLIC
LNMVTMMVETDNQSAEKEDFLFKVNLAFIAVFTGECVLKLFALRQYFFTNGWNIFDFIVV
ILSIAGTMLSDMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLIMFIFSIFGMSNFAYVKKEAGVDDIFNFETFGGSIICLFQITTSAGWDGLLLP
MLNREPPDCDPDFENPGTDVRGNCGSPGMGMIFFSSYIIISFLVVVNMYIAIILENFNVA
QEESSDALCEEDFEMFNKTWEKFDTAGTMFIEYVRLPDFCDALQEPLRVAKPNRLRLIQM
DLPLVIGDRIHCLDVLMAVTQMVLGDTLEMAAMRESIKTKFLQSNPTSDSFAPITTTVRH
KEEAWAATVIQRAYRSHLLRRGLRHAAFLRRSMRGAAQDQDPPEKEGLIARKMGALYAGY
VELAEEKGSVSAAEPGPRPGPGASGSSAKSIPLEITNEVVLHSAPEPDRVLGSLEEHVRE
SLV
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctgctccctcccccaggcgccgatgcgttccgccccttcacccgggaatcg
ctggcggagatcgagaggcttcaagcggaaaagcgaaacaaggcagcccgagtagacggg
catgaggcggccgaggtggaggaggaggaggcggcggcggcccccaacgccgacttggaa
gcgggcaagagtctgccgtggatttacggagaccctccagcggagatgatcaacacgcca
ttagaggatttggatcccttctacagggctcagaagacgttcatcgtgcttagcaaaggc
aacaccatttacaggttcaacgccgagccggcgtgctacctcctgagccccttcagcagc
gtgagaagaggagccatcaaaatcctcatccattcattattcagcatgttcatcatgatc
actattctatccaactgcgtgttcatgaccatgagtaacccgccggcgtggagtaaaaac
gtcgagtacgcttttactgggatttacaccttcgaggccaccgtgaaagtcttgtccaga
ggcttttgcgtcggctcgtttacattccttcgagacccgtggaactggctggatttcatg
gtgatcagcatggcgtacatcaccgagttcatcgatcttggtaacgtgtccgccctcagg
accttccgtgtgcttcgagcccttaaaaccatcactgtgattcccggtctgaaaaccatc
gtgggcgccttgatccagtcggtgaagaaaatggtggacgtgatggtcctgacggtcttc
gctctggccgttttcgccctggtcggcctgcagctattcatgggcaacttgcggcacaag
tgcgtgcgctggcccatcagcggcaatgacaccggcgagtggttcaacgtcaccaacccg
ctggtgctttataacgagaccatcggcatcaacagtagcgattattccaacagcaccttc
gatttcgtggagtacatcgagaactcggaaaactactactttctggaaggcagcaaaggt
cctcttgtatgcgggaacagttctgatgccggagtctgccccgaaggctttacttgcatg
aaggccggcgggaacccagattacggctacaccagctttgactcgttcggctgggccttc
ctggcgcttttcagactcatgactcaggactactgggaaaatctcttccagatgatcctg
cgggcggcgggcaaaacgtacatgctcttcttcgtggtggtgatcttcttgggctcgttc
tacctcattaacctcatcctggcggtggtggccatggcgtacgacgagcagaaccaggcc
acgctgcgcgaggccaaggagaaggaggaggagttccagcgtatcctcgagcagctcaag
agccaagagcagtctcagcattctggaagtcgagaatctctgaagagtagcaagtcgcca
agtcgtcgctcggcttctgagctgagcctggagcacgacgcagctgtcaatgactgtaat
gggaaaatggtcccaaccctcattgttcgatcgcctaccatggtcgtgcgtcatgacgac
gaagagctccgggagaagtctccagggatgcttgatccagaagagcttcatacggatgag
cacagccagaggcagaggtccacgagcgccatggaagagttggaggacgctcaaaggccg
tgtccgccgggctggtacaagtttgccaacattttcctgaagtggaactgctgcaagccg
tggctggctctcaaaaaatggttgtacgtcatcgtcatggaccctttcttcgacttggcc
atcaccatttgcatcgtgctcaacacgctcttcatgtccatggaacactaccccatgact
cacgagtttgacgagatgctctccgtgggcaacctggttttcactggaatcttcaccgcg
gagatgttcttgaagctcatcgccatggacccgtactactacttccaagtgggatggaac
atttttgacagcatcattgtcaccctcagcctggcggagttgggcctggcaaatgtccag
gggctctcggtcctgcgctccttccgtctgcttcgcgtcttcaagctggcaaagtcctgg
cccaccctcaacatgctgatcaagatcattgggaactcggtgggcgccctgggcaacctg
acgttggtgctggccatcattgtctttatcttcgccgtggtggggatgcagctctttgga
aagaactacaaggactgcgtctgcaagatctccgacgagtgcgagctgccgcggtggcac
atgaacgactttttccactccttcctcatcgtctttcgcatcctgtgcggtgaatggatc
gagaccatgtgggactgcatggaggtgtccggcgcgggcatgtgcctcatcgtcttcatg
atggtcatggtcattgggaatctggtggtgctgaacctcttcctggcgctgttgctcagc
tcgttcagcggcgacaacctgtcgacggcggacgacgacggggagctgaacaacctccag
atcgccgttgggaggatcacgcgaggtatcgactggctcaaagcggcggccgccgagatt
cctcgcagaatcctggacaaaaaccccgaggcgaccgaggacgacaacaccgaggccgtg
gagatgaacgacttggacaccggtggggatgtccgaaaagtagacgggatagcaaactgt
ttggcgccaggacggactcctggcgctgttatggatggagagcttgctcgaagcgtcccc
attgctcagggagagtcagactttgaaaacccggacgatgacgacgacgactacgactcc
aatgcctccacttgtggagagagcctacatgatgaggaaagcctcgaagacgatctcggt
cttataaaagaagtcaaactgatgggcgtggcaaccgaggacagcgacgtgtcgctgtgc
agcacggcggactatcagccgcccgatcctgaaccggaggaagaggaagaggaggagccg
gagccggtggacccggaagcctgcttcactgacaattgcgtgcggcgctggccttgcctc
accgtggacgtcgacacaatcgggggcaagcgatggtggaagctacgcaagacctgcttc
gccatcgtggagcacgattggttcgagtccttcatcatcttcatgatcttgctgagcagc
ggcgcactggcttttgaagacatttaccttgagcgacggcgaatcatcaaaattatcctg
gagtatgccgataaagttttcaccttcgtctttgtcgtggagatgctcctgaaatggacg
gcatacggcttcaagacctacttcaccaacgcctggtgctggctggactttttcatcgtc
gatgtttctctgattagtctggtggcccactggttgggtttctccgagttgggacctatc
aaatccctgcgaacgctgagagcgctgaggcctctccgcgccctctccagatttgaaggc
atgcgggtggtggtgaacgcgttggtgggcgccatcccgtccatcttcaacgtactgttg
gtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaccatgttcgccggcaag
ttctaccgctgcgtcaacaccacctcgcaggagcgcttcgacgtcaccgaaatcaacaat
cgcagcgagtgcctggccctgcaagaggccacgggggaggcccgctgggtcaacatcaaa
gtcaactacgacaatgttgggaagggctacttgtcgctgctgcaagtggcaacttttaaa
ggctggatggacatcatgtatgctgctgttgactccagggaggtggaggagcagccgtcg
tacgagatcaacctatacatgtacgtctactttgtcatcttcatcatcttcggctccttc
ttcacgctcaacctcttcatcggcgtcatcatcgacaacttcaaccagcaaaagaaaaag
ttgggagataaagacatcttcatgacggaagagcagaaaaagtactacgaagccatgaag
aaactcggttccaagaagccgcagaagccgattccccgtcccaccaacgtccttcagggc
ctggtgttcgacctcatcagtcagcagttctttgacatcttcatcatggtgctcatctgc
ctcaacatggtgaccatgatggtggagacggacaaccaaagcgcggagaaggaggacttc
ctctttaaagtcaatctagccttcattgccgtcttcaccggcgagtgcgtgctgaagctc
tttgctctgcgacagtacttcttcaccaacggctggaatatattcgactttatcgtcgtc
atcctctccatcgcgggcacgatgctgtcagatatgatcgagaagtactttgtgtcaccg
accctctttcgcgtgatccgtctggccaggatcggtcgcatcttgcgactcatcaaagga
gccaaaggcatccggacgctcctcttcgctctgatgatgtcgctccccgccctcttcaac
atcggcctgctgctcttcctcatcatgttcatcttctccatcttcggcatgtccaacttc
gcctacgtcaagaaggaggcgggcgtcgacgacatcttcaactttgagacgttcggcggg
agcatcatctgcctcttccagatcaccacctcagccggctgggacgggctcctgctgccg
atgctcaacagggagccgcccgactgcgatcccgactttgagaaccccggcacggacgtg
aggggcaactgcggcagcccgggcatgggcatgattttcttcagcagctacatcatcatc
tccttcctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacgtcgcg
caggaggagagcagcgacgcgctgtgtgaggaggactttgagatgttcaacaagacctgg
gagaaattcgacacggccggaaccatgttcatcgagtacgtccggctcccggacttttgc
gacgcgctgcaagagccgctgagggtcgccaagcccaaccgccttcgtctgatccagatg
gacctcccgctggtcatcggcgaccgcatccactgcctggacgttttgatggccgtcacg
cagatggtcctgggagacacgctggaaatggcggccatgcgggagagcatcaagaccaag
ttcctccaaagcaaccccacctcggactccttcgcgcccatcaccaccaccgtacgccac
aaggaggaagcgtgggctgccaccgtcatccagcgggcctaccggagccacctgctgcga
cggggcctccgtcacgccgccttcctgcgtcgctccatgagaggggccgcccaagaccaa
gacccgccggaaaaagagggattgattgcgcgcaaaatgggagctctatatgctggctac
gtggagcttgctgaggagaaggggtctgtgtctgcggcggagccgggaccccgacctggt
cctggcgcttccggatcgagtgccaaatcaatacctttggaaattacgaatgaggtggtg
ctgcattctgcccctgagccagaccgagtcctcggcagccttgaagaacatgtcagagag
tcgcttgtataa
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