Hippocampus comes (tiger tail seahorse): 109520525
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Entry
109520525 CDS
T04969
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04620
Toll-like receptor signaling pathway
hcq04621
NOD-like receptor signaling pathway
hcq04622
RIG-I-like receptor signaling pathway
hcq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109520525 (traf3)
04621 NOD-like receptor signaling pathway
109520525 (traf3)
04622 RIG-I-like receptor signaling pathway
109520525 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109520525 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_4
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109520525
NCBI-ProteinID:
XP_019733375
UniProt:
A0A3Q2YGC1
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAGRNVDGREVQVPLQQAAPSLIPPLSAAPPITPLPTRPANPWPPSDSSQGAAAGFLPL
DGGFKDHFVDVPEEKYLCESCRLVLCQPRQTECGHRFCQTCIAHILSRPNPVCPADMEPL
FSNKIFRDVCCHREILALKVFCRAEAKGCQEQMSLQQMPVSPTPPPQMALTDLQVSALSP
TLLSQPCGMLSCRPSVCVFVRQKHKETVCPAFPVSCPNLCSFSSLPRSELASHQHECPKA
QVSCPFQRYGCTYRALSQEVRQHEAASAGDHLRMMMLKNVSLESKVEEVKGELLDKCKAV
PLVSSRLCEAEKHNGELRDKHRHMEQKVASMQKVMSAHSEKLLEIELGLRALASLPEELE
KVRLSLDAVRSRLGALEQGGRSAAGTVTLASLETQQNRQGDMLSVHDIRLADMDLRFQVL
ETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT
HLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLVDAFKPDPNSSSFRRPAAEMN
IASGCPLFVSQSVLESASYTKDDNIFIKVTVDTSDLPDP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggacgcaacgttgacgggagggaggtgcaggttcccctccagcaggcggcg
ccctccctcattccgcccctgtctgctgcccctcccatcaccccgcttcccacccggccg
gccaatccctggcctccgagcgactcttcgcaaggcgcggcggcgggcttcttgccgctg
gacggcggcttcaaggatcactttgtggacgtccccgaggagaaatatctgtgcgagtcc
tgccgactggtcctgtgtcagccccggcagaccgagtgcggacatcgcttctgtcagacc
tgcattgcgcacatactcagccgccccaaccccgtgtgcccggccgatatggagcccctg
ttcagcaacaagatcttccgcgacgtctgctgccatcgggaaatcctggcgctgaaggtg
ttctgtcgcgccgaggccaaaggctgtcaggagcagatgagcctgcagcagatgcccgtg
agcccgacgccgcccccccagatggcgctcaccgacctgcaggtcagcgccctttcgccg
accttactatcccagccgtgtgggatgctaagctgccgaccgagcgtttgtgtgtttgtg
cgtcagaaacacaaggagacggtgtgtccggccttcccggtgtcgtgtccgaacctttgc
tccttctcgtcgctgccgcggagcgagctggccagtcaccagcacgagtgcccgaaagct
caggtcagctgtcccttccagcgctacggttgcacctatcgggcgttgagccaggaggtc
cggcaacatgaagccgcaagtgccggcgatcacctgaggatgatgatgctgaagaacgtc
tccttggagagcaaggtggaggaggtgaagggtgagttattggacaagtgcaaagccgtc
cctctggtgagctctcgtctttgcgaggctgagaagcacaacggcgagctgagggacaag
cacaggcacatggagcagaaggtggcctccatgcagaaggtgatgagcgcccactcggag
aagctcctggagatcgagctggggctgcgcgctctggcctcgctgccggaggagctggaa
aaggtccggctgtcgctggacgccgtccgcagcaggctgggcgcgctcgagcagggagga
cgctccgccgcaggaaccgtcacgctggcctcgctggagactcagcagaaccggcagggc
gacatgctgagcgtccacgacatccgtttggccgacatggacctccgcttccaggtgctg
gagacggccagctacaacgggacgctgatctggaagatccgcgactacaagcggcggaaa
caggaagcggtggcggccaagaccttgtcgctctactcgcagcccttctacacgggatac
tttggctacaagatgtgcgcccgcgtctacctgaacggcgacggcatgggcaagggcacc
cacctgtcgctgttcttcgtcgtcatgcgcggcgagtacgacgcgctcctaccgtggccg
ttcaaacagaaggtgaccctgatgctgatggaccagggtccggcgcgcaagcacctggtc
gacgccttcaagccggaccccaacagcagcagcttccgccgccccgccgccgagatgaac
atcgcctccgggtgtccgctcttcgtctcccagagcgtcctggagtccgccagctacacc
aaggacgacaacatcttcattaaggttaccgtggatacttccgaccttcctgatccatga
DBGET
integrated database retrieval system