Hippocampus comes (tiger tail seahorse): 109521726
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Entry
109521726 CDS
T04969
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109521726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109521726
04121 Ubiquitin system [BR:
hcq04121
]
109521726
03036 Chromosome and associated proteins [BR:
hcq03036
]
109521726
Enzymes [BR:
hcq01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
109521726
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109521726
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109521726
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109521726
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
109521726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
JHD
F-box
Cupin_8
LRR_6
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
109521726
NCBI-ProteinID:
XP_019735312
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MGRTGTRRRYQEDVISDEEIDGRRTFNLEEKVHCQRFNSDRILRMQGKDLTYELIQRSGL
RDPIIFEKIDGLGLKMPDPNFSVSDVKMFVGSRRMIDVMDVSTQKGIEMSMAQWTRYYES
SPSQREKLYNVISLEFSHTKMENLVKRPSTLDLIDWVDNMWPRHLKERQRDSTNSISDMQ
YPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHVLRGSKVFWLIPPTAQNLELYEHWVLSGK
QSDIFLGDRASDCQRIELRQGCTFIIPSGWIHAVYTPVDSIVFGGNFLHSFNIPMQLNIC
NIEDRTRVPVKFRHPFFYEMCWYVLERYSYSLTKTSYLTPEFQKLSLDIGMNPKTKHLLY
GRYPATNNFFFLFSNLNILSGTDPAFENMAEEDKSVSEDDVLEQLLDKPANVNLTPLELE
GLWNLVGKLESLPSNKKCVPPGIHNSPALITHIKALLKEHANDDPKKSYTGKPIVKWSKR
SLNHQPLQPPPALNPKFVATPVMPRPQKPASSMSVLRRRRVRCKRCEACMRTECGECNFC
RDMKKFGGPGKLKQTCVLRQCLSPGLPLSAVCEICKEPNQDETGDHFFTLMECSNCAQIV
HPSCLTIRGEGIINKDLPSCWECPKCVQGITDSEQRKCSSLLDARMAKIFRQQRHCRDGN
DSSDDDEDEATHRKKSRIQPGGCHSSRRGLRTNRRGLFKGGSTHRGSREGPVTPGTSIFK
FKAGRRRGMRLRGGSRMQQRGASTEESDDGDEEEDDDSGHGDQDQHPHQCRRRSRTDEEE
DEDSEKHEFDPDDEGMDLEEEEELEGPWDSDPEPPVLLMSDLNDDILCGSYLTVTLQRPI
ITDKKSGCIVPKMEAAMGLRSPPLNACGQPSINRKTTFNKALRFKSNDNTREGQILQGPG
RPSHRGNCVIRSAIDQSVSSDEGEPSTSSVSPAMSPPSLLSLSSFQDVDESGGEKEVWVS
VFRYLNRAELLKCMTVCKAWYKWSFDKHLWSHLDVSRFNPLSNQALAGIIKHQPTSLDLS
WTPLAKRQLNCLLTRLPGLRELRVAGLSWTCLSALVTPTLPSLRLLDLRWCEGIKDTQFK
ELLTHHGSESSYCRLKNIVTLHLSGLDINESTLRLIQHHMPHLENLDVAHCKNITDSSIA
LLAAVGTRTRNNLSELILSGCHQLSDGCMSYLKRISSLTFLDLRGCKKISIQACNAFISD
LSHIAVFCMIEDKVIQYLN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggggcggactggtacacggcggcgttatcaagaggatgttatctcagatgaagagatt
gatggaaggagaacgtttaatttggaggaaaaagtccactgccagaggttcaactctgat
cggatccttcgcatgcaaggaaaagatttaacatatgaactcatccaaagaagtggcctg
agagacccaatcatctttgagaaaattgatggactaggactcaagatgcctgatccaaac
ttcagtgttagtgatgtcaagatgtttgttggtagcagacgtatgattgatgtcatggat
gtaagcactcagaaggggatagagatgtccatggcccagtggacacggtactatgagagt
tctccatctcagcgagagaagctctacaatgtcatcagcctggagtttagccacacaaag
atggaaaatctggtcaagagaccttccacacttgatcttatagactgggttgacaacatg
tggccccgtcacctgaaagaaagacaaagggactcaaccaactcaatcagtgatatgcag
tatcccaaagtacaaaagtactgtctgatgagtgtggagggatgctatacagactttcac
attgactttggaggaacatccgtgtggtaccatgttctaagagggagcaaggtattctgg
ttgatccctcccaccgctcagaacttagagttatatgaacactgggtgctgtcgggaaaa
caatcggatatttttcttggggatcgtgcttctgactgccagaggattgaacttcgacaa
ggatgcacctttatcataccatcaggttggattcatgcagtctacacccctgtggattct
attgtctttggtggaaacttccttcacagctttaacattcctatgcaacttaacatttgc
aatatagaggaccgcacacgggttccagtgaagttccgtcacccatttttttacgagatg
tgctggtatgtgttggagcgctatagctacagtctgaccaagacttcttacctcacacca
gagttccagaaattgtctctggacattggtatgaacccaaagacaaaacatttgctttat
ggtagatatccagcaacaaataacttttttttcctcttctctaatttaaatatactctct
ggcacagatccagcatttgagaatatggcggaagaagataagagtgtcagtgaagatgat
gttttagaacagctgttggacaaaccagcgaatgttaatttgactccgttggagctagaa
gggctttggaacttggtgggcaaacttgagtcactcccatccaacaagaagtgtgtccca
ccaggcatacacaattcccctgcactcatcacacacattaaggcactcctaaaggagcat
gctaatgatgatcccaaaaaatcctacaccggaaaaccaattgttaagtggtcaaagagg
tccttgaaccatcagcctcttcaaccaccaccagcccttaatcctaaatttgttgccact
cctgtcatgccgcgaccacagaagcctgcgtcttccatgtctgtcttgagaaggcgcagg
gtcaggtgtaagcgctgcgaagcatgtatgagaactgaatgtggagaatgtaatttctgt
cgagacatgaagaagtttggaggacctggaaagctaaagcaaacctgtgtgctgcgccag
tgtctctcaccaggacttccactgtctgctgtttgtgaaatttgcaaggagcctaaccaa
gatgaaactggagatcacttcttcactctgatggaatgttcaaactgtgcacagatagtc
cacccatcttgcctcacgattcggggtgagggaattatcaacaaagaccttccaagctgc
tgggaatgtccgaaatgcgttcaagggatcactgactcggagcagcggaaatgttcttct
ctgctggatgcccgcatggctaagatattccgacagcagagacactgtcgtgatggaaat
gactccagtgatgatgacgaggatgaagccacacacagaaaaaagtcaaggatacagcca
ggaggatgccactcttcccggagaggattgcgtaccaacaggagaggattgttcaaagga
ggatcaacccacagaggaagcagggaaggccctgtgactcctggtacttccatcttcaag
ttcaaggctggtaggaggagagggatgagattaaggggtggttcaaggatgcagcaaaga
ggtgcttctactgaggaatctgatgatggtgatgaagaggaagatgatgacagcggacat
ggagaccaagatcagcatcctcatcagtgtaggagaaggtccaggactgatgaagaggaa
gatgaggacagtgaaaaacatgagtttgacccagatgatgagggcatggacctagaagaa
gaagaagagctagaaggaccctgggattctgacccagaacctccagtgctcctgatgtct
gatctcaatgatgacatactttgtggctcctacctgactgtgactctacaacgcccgatc
attactgataaaaaatctggttgtatcgttccaaaaatggaagctgccatgggtttgagg
tcacctccactaaatgcatgtggtcaaccaagcatcaaccggaagaccacttttaacaaa
gctttaaggttcaagagcaacgacaacacacgggaagggcaaattctacaaggaccagga
aggccaagtcatcgtggcaactgtgtcatccggagcgctatcgatcagtctgtgtcctca
gacgaaggggaaccatccacctcttctgtctctcctgcaatgtcacctccttccctgctg
tccctgtcatcttttcaggatgtggatgagagtggaggagaaaaggaagtgtgggtgtct
gttttcagataccttaacagagctgagttgctcaagtgcatgactgtctgcaaggcctgg
tataagtggagttttgataagcatctatggagccatctggatgtgagtcgattcaacccc
ctgagcaaccaggccttggcaggtatcataaaacaccagcccacttctttggacctctca
tggacgcccctggccaaaagacagctcaactgtcttctaaccaggctaccaggtcttcga
gagttaagggttgctggcctgtcctggacatgcctgtcagcattggtcaccccgactctt
ccctctcttcgactactggatctgcgttggtgtgaaggcattaaagatacccaatttaaa
gagctcctcacccatcatggttctgagtcatcttactgcagactaaagaacatagtgaca
ctgcacctgtctggtctggatatcaacgagtccactttgagacttattcagcatcatatg
ccacacttggagaacctggatgtggctcactgcaagaacattacagattcttcaatagct
ttgcttgcagcagtgggcacacgcactcgcaacaacctcagtgaactcattctatcaggt
tgtcatcagttgagtgatggctgcatgtcctacctgaagcgtatctcctctttgactttt
ctggacctaagaggctgcaagaaaatcagtatacaagcctgcaacgccttcatctctgac
ctgtcacacatcgctgtgttctgtatgatcgaggataaggttatccaatatctaaactaa
DBGET
integrated database retrieval system
