Hippocampus comes (tiger tail seahorse): 109523753 Help Entry 109523753         CDS       T04969                                  Symbol thbs1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism hcq  Hippocampus comes (tiger tail seahorse) Pathway hcq04115   p53 signaling pathway hcq04145   Phagosome hcq04148   Efferocytosis hcq04350   TGF-beta signaling pathway hcq04510   Focal adhesion hcq04512   ECM-receptor interaction hcq04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:hcq00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109523753 (thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109523753 (thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109523753 (thbs1)    04148 Efferocytosis     109523753 (thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     109523753 (thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     109523753 (thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     109523753 (thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hcq04131]     109523753 (thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hcq00536]     109523753 (thbs1) Membrane trafficking [BR:hcq04131]  Endocytosis   Phagocytosis    Opsonins     109523753 (thbs1) Glycosaminoglycan binding proteins [BR:hcq00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109523753 (thbs1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN cEGF Motif Other DBs NCBI-GeneID:  109523753 NCBI-ProteinID:  XP_019738687 LinkDB All DBs Position Unknown AA seq 1167 aa AA seqDB search MKLTGIFLLLMLWTCEGARIAESGEDNSVYDLFELVQVPKKNHGVNQVKGDDPYSPAYKI LNPDLIPPVPERALRDLIDSIHAERGFLLLLNFKQAKRTRGSLLTVEKKDGSGPIFEIVS NGKANTLDIVFSTEKKQHLVSIEDADLATGHWKNITLFVQEDRAQLYAGCDEVNNAELDA PIQSILTQETPDGARLRIGKGAVKDKFMGVLQNVRFVFGTSLDAILRNKGCQSSPDSMMM ENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLISMFKELKWLGVVVKELSVELRKLTNEN KLIKTRIGIHSGVCIHNGIVHKNRDEWTVDDCTECTCQNSATVCRKISCPLIPCANATVP DGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRDC YLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCVGEGRQTEK CQKSPCPINGNWGPWSPWDTCTVTCGGGVQTRKRLCNDPAPNFNGKDCVGDGKETQTCNK KTCPIDGCLSNPCFAGVKCTSFPDGSWKCGKCPLGYTGNGVKCKDLDECKEVPDACFEFN GVHRCENTEPGYNCLPCPPRYSGPQPFGKGVEQAAATKQVCSPRNPCLDGSHNCNKHARC NYLGHFSEPMFRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNLPN SGQEDYDNDGIGDACDIDDDNDGIPDDRDNCPFTFNSRQYDYDRDDVGDRCDNCPYNSNP DQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNPD QVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGI PDDKDNCRLAHNPDQVDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQMV PLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTERDDDYA GFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHT GNTAGQVRTLWHDPKNVGWKDYTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGSIYDKTY AGGRLGLFVFSQEMVYFSDLKYECRDT NT seq 3504 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacggggatatttttgttactgatgctttggacctgtgagggtgccagaata gcagagagcggagaggacaacagcgtgtacgacttgttcgagctggtgcaagtccccaag aagaaccacggagtgaatcaggtgaaaggagacgacccgtacagccccgcctacaagatc ctcaacccggacctgatccccccggtccccgagcgggccctgcgggacctgatcgactcc atccacgccgagaggggcttcctcctgttgctcaacttcaagcaagccaagcgcacgcgg ggcagcctcctgaccgtcgaaaagaaggacggctccggtccgatatttgagatcgtgtcc aatggcaaagccaacacgttggacattgttttctccaccgagaagaagcagcatttggtc tccatcgaagatgcggatctcgcgacgggccactggaagaacatcacgctgttcgtgcag gaggaccgggcgcagctgtatgccggatgcgacgaggtcaacaacgccgagctggacgcg ccgatccagagcatcctgacccaggagacgcctgacggcgcgcggctcaggatcgggaaa ggagccgtgaaggacaagttcatgggggtccttcaaaacgtccgctttgtttttggaaca agcttggacgccatcctccgcaacaaaggatgtcaaagctcgccagattcgatgatgatg gagaatcttaatggctcgtccgccatcaggacagagtacactggccataaaactaaagat ctgcagatggtctgcggtttctcctgtgaggacctcatcagcatgttcaaggagctcaaa tggcttggcgtggtggtcaaggagctgtccgttgagctacgtaaactgacaaatgaaaac aagctgattaagacgcgcatcggcatccacagcggcgtctgcatccacaacggcatcgtg cacaagaacagagacgagtggaccgtcgatgactgcaccgagtgcacttgtcagaactct gcaacagtgtgtcgcaagatctcctgtcccctgattccctgtgccaacgcaactgtaccg gacggagagtgttgcccacgctgtggaacaccgagcgactacgcagaggacggctggtct ccgtggtctgaatggacccattgttccgtgtcatgtgggcggggcatccagcagcgcgga cgctcttgcgaccgtatcaataacaactgcgagggcacctccgtgcagacgcgggactgc tacctccaagagtgtgacaagcgcttcaagcaggatggcagctggagccattggtcgccg tggtcctcatgctccgttacctgcggggcaggcgtcatcactcgaatccgtctctgcaat tccccaaccccccagctcggaggcaaggactgtgtgggagaaggtcgccaaacagaaaag tgtcaaaagtctccatgccccatcaatggcaactggggtccctggtcaccgtgggatacg tgcaccgttacgtgtggaggcggcgtgcaaactcgtaaacgcctgtgcaatgaccctgcg ccaaattttaatgggaaagattgtgttggagacggcaaagaaacgcaaacatgcaacaag aaaacgtgtcctattgacgggtgcctatcaaacccttgtttcgctggggtcaagtgcacg agttttcctgatggttcctggaagtgtggaaaatgccctcttggttataccggcaatggt gtcaaatgcaaagacctcgacgagtgcaaggaggtccccgatgcttgcttcgagtttaac ggcgtacaccgctgcgagaacacggagcccgggtacaactgtctcccctgtccgcctcgt tactctggacctcaaccgtttgggaaaggtgtggagcaggctgctgctactaaacaggtg tgctcgccccgaaatccgtgcctggatggaagccacaactgcaataaacacgcgcgctgt aactacctcggccatttctcggaacccatgttccgatgcgagtgcaagccgggctacgct ggcaacggacacatctgcggagaggacaccgatctggatggttggcccaatgctgacttg gtttgtgtggagaatgccacctaccactgcaaaaaggacaactgccccaacctccccaac tccggccaagaagattatgacaacgacggcattggagacgcttgtgacattgacgatgac aacgacggcattcctgatgacagggacaactgtccgttcaccttcaactccaggcagtat gactacgaccgtgatgacgtgggcgatcgctgtgacaactgcccttataatagcaaccct gaccaaacagacacggacaacaacggggagggagatgcctgcgccgtggacatagatggc gatggcatactgaatgaaaaggacaactgtccctatgtgtacaatgtggaccagagagac accgatttggatggggtgggcgacatgtgcgataactgccctctggaacataatcctgat caggtggattcagatgacgaccgtgtgggagacaagtgtgacagcaaccaggacattgat gaggacggacaccagaacaacctggacaactgcccgtacatccccaacgccaatcaggcc gatcacgacaaggacggcaagggagatgcgtgtgaccacgatgacgataatgacggcatc cccgacgacaaggacaattgcagactggcacataatcctgaccaggttgactccgatggc gacggccgtggagatgcatgcaaagatgactttgaccaagacaacgtgcctgacatctac gacgtgtgtccggagaactttgacattagcgagacagacttccgcaaatttcagatggtt cctctcgacccgaagggcacttcccagattgatccaaattgggtggtgcgtcaccagggt aaagagctcgtccaaaccgtcaactgtgaccctggaattgccgttggatatcatgagttc aatgcggtggacttcagtgggaccttcttcatcaacaccgagagggatgacgactacgcc ggctttgtgtttggttatcagtccagctccaggttctacgtggtgatgtggaagcagatc actcagacctattggtccaataaacctaccaaagcccagggctattctggcttgtcaatc aaagtggtcaattccaccaccggcccgggagagcacctcaggaatgccctgtggcatacc ggcaataccgcaggacaggtccgcactctctggcatgaccccaagaacgtcggatggaaa gattacacggcctacagatggcatctgatccacagaccgagaacggggcttatcagggtt gtgatgtacgaaggaaagaagatcatggcagattccggcagcatctatgacaagacgtat gccgggggaaggttaggtctttttgtcttctcccaggagatggtttacttctcagacctc aagtatgagtgccgagatacataa

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