Hippocampus comes (tiger tail seahorse): 109523980
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Entry
109523980 CDS
T04969
Name
(RefSeq) interferon regulatory factor 3-like
KO
K05411
interferon regulatory factor 3
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04620
Toll-like receptor signaling pathway
hcq04621
NOD-like receptor signaling pathway
hcq04622
RIG-I-like receptor signaling pathway
hcq04623
Cytosolic DNA-sensing pathway
hcq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109523980
04621 NOD-like receptor signaling pathway
109523980
04622 RIG-I-like receptor signaling pathway
109523980
04623 Cytosolic DNA-sensing pathway
109523980
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109523980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109523980
04131 Membrane trafficking [BR:
hcq04131
]
109523980
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109523980
Membrane trafficking [BR:
hcq04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
109523980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109523980
NCBI-ProteinID:
XP_019739084
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MAHSKPLFIQWLRAQIDSGAYPGVQWTNQEQTEFCIPWKHALRQDSSDSDILIFKAWAKV
SGNGRIQGEASVWKRNFRCALRAKKFQMIADNKNDTANPHKVYRWPDESTAGENSSATPP
SQYEPDCHESPPIQESYVDPFVDECLYCPIQESSPSEDLLQTCLKQLNIGPQAEEAAAFE
FPPEQQERRHPIVIGGHMLPWQQPHPVAAEDEVGGAGSPGQPAHPMEGAVGEACGGQLAK
QFLDNIHKTKDGNHFKTEFRIIVHYRGQKVSEQLVANEAGFRLIYRPEQAEPALDQESGL
SLVSLPSPVTIKDQKQAKLTQCILDKLGEGLDVGVSGDVVYGQRRGEIKAFWSFSKFDHS
GRPQEISKQQPQPLYPFRDFIHGILDFITLESKECGPCSLFLCLGEKWPDPQNWPWTKKL
IIVEVVLTSLELLKNMAMEGGASSLKSVDLQVSLEEMVIG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctcattccaaacctctgttcatccagtggcttcgggctcaaattgacagcggcgcg
tatcccggcgttcagtggaccaaccaggagcaaacggaattttgcatcccttggaaacac
gctttgagacaggactcttctgattctgacattctcatcttcaaggcctgggcaaaggtg
agcggcaacggccgcatccagggagaggcctctgtgtggaagaggaacttccgatgcgcg
ctgcgagccaaaaagttccaaatgatagcagacaacaagaacgacacggcaaaccctcac
aaagtctaccgctggccggatgagtcgacggcaggagagaactcttccgctacaccaccc
agccaatatgagccggattgccacgaaagccctcccatacaagaaagctacgttgaccca
ttcgtggacgagtgtctctactgtcctatccaagaatcctcccccagtgaggaccttctg
caaacttgtttgaagcagctcaacattgggcctcaagcagaagaagcggcggcctttgag
tttcctcccgagcaacaggagcgccggcatcccatcgtgattggcggccacatgttgccg
tggcaacagccgcatccagtcgcggccgaggatgaagtcggcggagccgggtcgccgggg
caaccggcacacccgatggagggagccgtcggtgaggcgtgcgggggccaattagccaag
cagtttctagacaacattcataagaccaaggatggaaatcatttcaagaccgaattccgg
ataattgtccactacagagggcagaaggtgtcggaacagctggttgccaacgaagctgga
ttccgcttaatttacaggcctgagcaggcggagcctgccttggaccaggagtcgggcctg
tctttggtttccctgccgagtcccgtcaccatcaaggatcaaaaacaagccaagctgacc
cagtgcatcctggacaagctcggcgagggcttggacgtcggcgtgtcgggcgatgtcgtc
tacggccagagacgaggcgaaatcaaagctttttggagcttctccaagtttgaccacagc
ggacgcccgcaggaaatctccaaacagcagccgcagccgctttaccccttccgggacttt
atccacgggatactggactttataacgcttgaaagcaaagagtgcggtccctgctccctt
ttcctgtgcctgggtgagaagtggcctgacccgcaaaactggccttggaccaagaaactc
atcatcgtggaggtggtgctcacgtctttggagctcttgaagaacatggccatggagggt
ggcgcgtcctccttgaagtccgtcgacctgcaagtgtcgctggaagagatggtcatcggc
tga
DBGET
integrated database retrieval system
