Hippocampus comes (tiger tail seahorse): 109524342
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Entry
109524342 CDS
T04969
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109524342 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109524342 (kdm2a)
04121 Ubiquitin system [BR:
hcq04121
]
109524342 (kdm2a)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109524342 (kdm2a)
Enzymes [BR:
hcq01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
109524342 (kdm2a)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109524342 (kdm2a)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109524342 (kdm2a)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109524342 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
109524342 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
LRR_6
C1_1
LRR_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
109524342
NCBI-ProteinID:
XP_019739676
UniProt:
A0A3Q2YVW4
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGRRMFDLDEKLHCSRFGSQLVKHMEGKDF
TFEYIQRGGLRDPIIFEKDEGLGIQMPDSDFSVSDVKVFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVQRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMQYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIELKQGNTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNISHLTPEFQKYSLGIG
LTRADLGTDDNMGNGISNVVDRDVEVKSKESEDEDVQIEENKEVIRPQHVLTPFELEGLW
NLVGKLEELPANKKCVPSGIENAAALLEDMRAVLKEHGTDIPNLSYTGEPIVKWPKRPSW
YQPPSPPPVPLHRPRLAPPLHKPLGQRSHKRSRLSALRRRRVRCKTCAGCCRKECGDCQF
CLDMRKFGGPGRMKKGCIMRQCLMPALPNTARCAICEEGEAEESDPSTHTLMECSVCSRI
THRRCMKDPGEGKINTDLPSLWECPRCYNSKGSESESSSEGESDASESSTSFPPSKFGHR
EGVGIGEAVMRGRRGRPTLRPTARPTAPPPSQKLLLQHRQNRKRASLLELRLKKRIKLER
SRILAQRQAMERARLQSRLRSPVSTLSQGRGRGTSWPSGTLHGTSSRVTGSLQQQSSSSL
TFEPKGEPRRGHGRGVRLRGGGAGRGMTGSRYHQGLEVECEDSSSSSTHSSSSDDEEEER
AQNGRLVGNKENRPESRQGGQAAKDRGEEERRDANQNDGEDDGDEMERRTDGSFVKVTLQ
RPTNDKQEPSAIVPKLEAITPQFAAPAKQNHNKTLIRPPIRNPNKHSNSHVPAITRSGHM
CTSHHMEGHNVAKRKKSSGGAKLSNGASSSCSSELPHHRVPLSALQEEGSEADREGSGSG
PDCEREVWVSVFRYLSRADLCVCMVVCKNWYKWCLDKRLWAQIDLSVKRIVTPQALTGII
KRQPASLDLSWTNISKKQLSWLVGRLPGLKDLMLAGCSWTSISALCSSACPLLRTLDVRY
ADGVKDAQIRDLVTPPGCDNRSQLRTMQCLRLAGLDISDSTLRLVIRHMPHLTKLDLSHC
NGLTDHSINLLTAVGSSTRNTLTELNLGGSSKLTDTCLMYLRRLSCISLLDLRGCKGVSR
KACESFISELSVNTLYCLSDEKLIQRIS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcatacacgatacagcaaacgcctgcgtactggtacgcgtcggcggtac
caggatgacggaatctctgatgatgaaatcgaagggagacgcatgtttgacctagatgag
aagttgcattgcagcaggtttggatctcaattggtcaaacacatggaaggaaaagatttc
acatttgaatacatccaacgaggagggttgagggatcccatcatctttgagaaagatgaa
ggccttgggatacaaatgccagactctgatttcagcgtgagtgatgtgaaggtgtttgtt
ggcagtcgtcgcatcgttgatgtgatggatgtgaacacccagaagggaatcgagatgtca
atggcacagtggcggcgctactatgagacgccaccttccgaaagagagaaactttacaat
gttatcagcttggagtttagccacaccagattggagaacctggtccaacgaccggcttca
gtggatctaattgactgggtggacaacatgtggcctcgccacctcaaggagaggcagagg
gactctacaaatgccattattgacatgcagtatcccaaagtacagaagtactgtctgatg
agtgtgcagggctgcttcacagatttccatattgactttggaggcacttcagtctggtac
catatactccgagggggaaaggtgttctggttgattccacccacccctcagaacctggag
atgtatgagaactgggttttatctggaaaacagggagatatcttcctgggcgacaagtgt
cacgactgccagaggatagagctcaagcagggcaacaccttcatgattccctcaggttgg
atccatgctgtgtacacacctgaggacaccctggtgtttggggggaatttccttcacagc
tttaatattcccatgcagctcaacatctacagcattgaagatcgcactcgggtcccagcc
aagtttcgctatccattttactatgagatgtgctggtatgttctggagagatacctgtac
tgcctgacaaacatctcccaccttacccctgagttccaaaaatactctcttggaataggc
ctgactcgggcggaccttgggaccgatgacaacatgggcaacggtatctccaatgtcgtc
gacagagatgttgaagtaaagtcgaaggaatctgaagatgaagatgtccaaatagaagag
aacaaggaagttatcagaccacagcacgtattgacaccctttgagcttgaagggttgtgg
aatctcgtggggaagctggaggaattgcctgcgaacaaaaagtgcgtcccttcagggatc
gagaatgctgcagctttattagaagacatgagggctgttctgaaagagcatggtacagat
atccctaatctgtcctatactggagaacccattgtcaagtggcccaaaagaccatcatgg
taccaacccccatcacctccaccagtgccacttcaccgtccccgcttggcccctcccctc
cacaaaccactgggccagagatcccacaaacgttcacggctctctgctttgaggcgtcgg
cgagtgcggtgcaagacttgtgctggctgctgtaggaaagagtgcggtgactgccagttc
tgtctggacatgaggaagtttggcgggcctggaagaatgaagaagggctgcatcatgagg
cagtgtctcatgcctgctttgccaaataccgcccgatgtgccatctgtgaagaaggggaa
gcagaagaatctgatccaagcactcacacactcatggagtgctctgtttgttcacgaatc
acgcatcggcgttgcatgaaggatcctggtgaggggaaaattaatacagatttgccgagc
ctttgggaatgtcctaggtgttataacagcaaaggttctgagtcagagtcttccagtgaa
ggggaaagtgacgcgtcagagagctcaacgtccttccctccatccaaatttggccatcgg
gaaggtgtcggcataggtgaagctgtgatgcggggccgacgaggcagacccacattaaga
cccacagctcgacccacagccccgccaccctctcagaaattgctactgcaacatcggcag
aaccgcaaaagagcgagtctactggagcttcgacttaagaaaaggataaaactagagcgc
agcagaattcttgcacaaaggcaagcaatggagcgcgccaggttacagtcccgcctgcgc
tctccagtgagcacactatctcagggaagaggtcggggcacctcctggccaagtggcacc
cttcatggcacctcttctagggtcactgggtcactccagcaacagtcttcttccagtctt
acctttgaacccaagggagagccccgcagagggcatgggagaggggtgaggctgcgtgga
ggaggtgcgggtagaggaatgacaggtagtaggtaccatcaggggttagaagtcgagtgt
gaagacagtagcagtagcagcactcacagcagcagctctgatgatgaagaagaggagagg
gcacaaaatggcaggcttgtcggcaataaagagaaccggccagagtcgaggcaaggtgga
caagcagccaaagacagaggcgaggaagagcggcgagacgccaaccaaaatgatggagaa
gatgatggcgatgagatggagcggcgcactgatggctcatttgttaaagtgacactccaa
aggccaaccaatgacaagcaggagccttcagcaattgttcccaaactagaggcaatcacc
cctcaatttgctgctccggcaaaacaaaaccacaacaaaaccctcatcagaccacctatc
agaaatccaaataaacattccaacagtcatgtgccagcaatcacccgcagtggacacatg
tgcacatcccaccacatggaggggcacaatgtcgccaaaagaaaaaagtcaagcggtggg
gcaaagctgagcaacggtgcctcctcgtcttgctcctctgagcttccacaccatcgcgtc
cctttgtctgccctgcaggaggaaggcagtgaagctgacagggagggcagtgggagtggg
ccagactgcgagagggaagtgtgggtgtctgtcttccgatacttaagtcgagcagatctc
tgtgtatgtatggtagtctgcaagaactggtacaaatggtgccttgacaagcggctttgg
gctcagatcgacctgagcgtcaaacgcatcgtaacgcctcaagcgctaactggcatcata
aagagacaacctgcctcgcttgatctttcctggaccaacatctccaaaaaacaactcagc
tggcttgttggccgcctcccaggtctgaaggatctgatgttggcaggttgttcctggaca
tccatttcagcactctgttcctctgcttgccctctcctccgcactttggatgtacgatat
gcagacggggtcaaggatgctcagatcagggacctggtcactcctccaggctgtgacaac
cgcagtcagttgaggaccatgcagtgtttgcgacttgctggcttggacattagtgactct
accctgcgcctggtgattcgccacatgccccacttgacgaaactggacctttctcactgc
aacggccttacagaccactccatcaatctgctgactgcggtgggttcgtccacccggaac
acacttacagaactcaacctaggagggagcagtaaactcacagacacatgtctgatgtat
ctccgccgcctgtcctgcatatcactactcgacctgcgaggctgtaaaggcgtctcccgc
aaagcgtgcgagtcctttatctcagagctatcagtcaacacgctctactgcctgtcggac
gaaaaactgattcagagaatatcctaa
DBGET
integrated database retrieval system
