Hippocampus comes (tiger tail seahorse): 109528783 Help Entry 109528783         CDS       T04969                                  Symbol pcdh15 Name (RefSeq) protocadherin-15 isoform X1   KO K16500   protocadherin-15 Organism hcq  Hippocampus comes (tiger tail seahorse) Brite KEGG Orthology (KO) [BR:hcq00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:hcq03037]     109528783 (pcdh15)    04515 Cell adhesion molecules [BR:hcq04515]     109528783 (pcdh15) Cilium and associated proteins [BR:hcq03037]  Primary cilia and associated proteins   USH complex and associated proteins    109528783 (pcdh15) Cell adhesion molecules [BR:hcq04515]  Cadherins   Protocadherins    109528783 (pcdh15) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Motif Other DBs NCBI-GeneID:  109528783 NCBI-ProteinID:  XP_019747302 LinkDB All DBs Position Unknown AA seq 2178 aa AA seqDB search MRRGRWFIRWLATGMVILSSLSAVWGQDTDDWQYEECKLSRPGPPATIVTIDEESPNGTV LVENMQINGRAQDPGRTISLTLLDNYEYWVILEPTRQRLYLNSTGRVLDRDPPNYITTIV VQVQCTNELVGTVILHEVRIVVRDRNDNTPRFQHPRYYVAVNELTPVGTTIFTGFSGRNG ATDIDDGPNGHIEYSVLYNANDPESNSTVSVANTLSGHIVLAERLNYEDRTRYLVLIQAN DRAPYPPNRRTATTTLTVDVLDGDDLGPMFLPCVLVNNTHDCNPLTYRAAIPEFTEPSKL NPLNVTPPIRAVDMDRNIQPPSDRPGVLFFILVGHPVTYPQYFSLNKTTAELRVLQPISR DLYQRFTLVIKAEQDNGHPLPAYADLIIEILDENNQAPYFQFVTYQGYVSESSPVGTTIS AGVNLTTPLGIVALDNDVEETQDPMLKITLDDYTAIFSLTPTGIIRYLRLLKPVDREKQM TYTFTMVASDGVQRSGPVTVNILVVDANDNAPTFAQVSYSVDLFTDMQPGETVLQLTAGD ADEGLNGLVTYEILAGAQGHFVINNRTGRITVAPGVSLAVGRSFALTVKASDNAPESLRR SSITTVYIEVLPPNNQSPPRFPLLTYNLEVSEATRIGAILLNLQATDRENDPIAYRIVSG DSQKVFNLSETIGLLILEKALDRETEERYRLVVTASDGNPGGTSTTTVDIVVTDVNDNDP EFDPAAPTNFTVREEEAHLFVGQVKATDPDAGANGQVSFRIVNHPDLFVVAANGSIYTRV PLDRELRDSYELVIEASDGAVDPRRTTLTLTVRVTDIDDNSPLFSQQTYVVNVPENSPVG TVILTLSATDSDLFSNVTYRIKSESARRLFSLNAITGELAVLQTLDFEDLTAMGTGASYT FQVEAVDQGGVTAPGQATVTVRITDMNDFSPVFSQPLYKGMVAPNAEKGTVITTVFAEDP DPVGTPASFVRYRVDQDKSPYSGSIFDVEEVTGRIVTKVNLNEEPSLTFKLFVIAFDDGE PVKTNSTLVEITVLQPSRIPIFTQEEYRFPPVSELAPVGTPLGTILAAAINQTIYYSIVA GNDLGHFRVNNRTGVISTAKPLDYENVTSYVLRVQADSLLVVMSNLRVPSKTNTAKVFLE VRDENDHPPVFTRKLYIGGVTEDTKIFSSVLKIVATDQDTGNFSAMAYRLIIPPTAEGQD SFVIETYTGVIKSAIMFRNMRRSYFSFEVIATDDYGEGLSSNADVVVSVVNALDMQVIVS TVPPTLVEENKDQLISILERHVQDQIPGAKVIVEAIGPRRHGDGFELEDYSKSDLMVYAI DPLTNRAISRQELFKFLDGNVLEINKEFQPYLGEGGRILEIRSPDIVASVKKAAQAVGYT EGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPPGGKAAPTSAVGA NLYEELGDGSMRRGYGRQHQQLLRPSLLRPEELSMESGIDPGQDYYAQDYYNYDQGYDLP QYGSRRRLIAPMYDEYGEAIMEDDRYYYSPHGPEGRGRGRGRGGARGRGPPKRVAFRDEE GIEPAEPEADAEPSKAAKKLKSVIKLSKLLAVSKRGKQASAAAGPSPWKKAKMLKMFGAK QKDKDYAKLMSARRIDSLESLSDGPSPAGPVDRKSGARSQLGQVLKKINIGRKLQARRKS QGSASVTGSERDEEASQQTSEEEKKSKVSISVTESEPEAGTSGSSAKDKGSDEESSEKSS VDTEHLKVDLDRDDANESTVDSEEEPDGDPADSDRESTSEGEETEKGSIHEKESGTERES GSEKESESEKPSGTEKESETEKDSGSEQESETEKDSESGSIQASGSGKGTGTATEKGSVS ESDEESDEEETAGSTKDSSSTARSSIGSSATEASKASGDTGSGSRQGSGSVSGSATESRS ESGSRTLSGRGSATSQSTSTRTSASLSGSSVRSSQKTKTSASTLTSEKSGEGLSEAESGT GTVSETESGSASEGSWSKGSGQRKLSGSDSVGGSSNGSQMTEENSLSSKRSSSGTGSTSG SLRSRKSILTHRTESTITEESEEEASASETADESKESAGDVSDEATSSARSSAASARSSV AYAGQAPAAAYGSPPYPSDIRSISGTSQETYGGLSAITEVDEDAISTEKSASEASKDTGE SEATSDGDSESERDLTAF NT seq 6537 nt NT seq  +upstreamnt  +downstreamnt atgcgacggggccggtggtttatcagatggctggcgacaggaatggtcatcctgtcttcg ctaagcgccgtctggggccaagacaccgacgactggcaatacgaggagtgtaagctgtcc cggcccggcccccccgctactatcgtgaccatcgacgaggagagtcccaacggcacggtt ctggtggagaacatgcagatcaatggccgcgcccaggacccaggcagaaccatctcgctg actttactggacaactacgagtactgggtgatactggaaccgacgcgacagaggctctac ctaaacagcaccggccgcgttctggatagagatcctcccaactacatcaccaccattgtg gttcaagtccagtgcacaaacgagctggtggggaccgttattctgcacgaggtccggatc gtcgtgagggaccgcaatgacaacacgccgcgttttcagcacccgcgctactatgtggcg gtcaacgagctcaccccggtgggaacgaccatatttactggcttctcaggaagaaatgga gccaccgacatcgatgacgggccaaatggacatatagaatacagcgttctgtacaacgcc aatgacccagaatccaacagcacagtgagtgtggcaaacacgctatcgggacacattgtt ctagctgagaggctcaactatgaggacagaacacgctacctggttttgatccaagccaac gaccgggcgccgtaccctcccaacagacgcacggccaccaccacgctgacggtggacgtc ctcgacggcgacgaccttggacccatgttcctgccgtgcgttttggtcaacaacacacac gactgcaaccccctcacctaccgcgccgccattcccgaattcaccgaaccgagcaaattg aaccccctcaatgtgacccccccaatccgggcggtggacatggacagaaacatccaaccg ccgtcagacaggcccggtgtgcttttcttcatcctggttggccatccggtcacatatcct cagtacttctccctgaacaaaaccacggcggagctgcgcgtcctgcagcccatcagcagg gacttgtatcaaaggttcacgcttgttattaaggccgaacaggacaacggccacccactg ccggcctacgccgacctcatcatagaaatcctcgacgagaacaaccaggcgccgtacttc cagtttgtcacctaccagggttacgtgagcgagtcgtccccggtgggcaccaccatctca gccggggtcaatctcaccacgccgctggggatcgttgcgctggataacgacgtcgaggag actcaagaccccatgttgaagataaccctggacgactacacggccatcttcagtctgacc ccgaccggcataatccgctatctgaggctgctgaaacccgtcgaccgggagaagcagatg acctacacgttcacgatggtggcgtcggatggcgtccaacggagcggccccgtcaccgtc aacatcttagtcgtcgacgccaatgacaacgcgcccacgtttgctcaagtgtcctacagc gtggacttattcacagacatgcaacccggggagacggtgctgcagttaacggcgggggat gctgacgagggactcaacggactggtgacctacgagatcctggccggggctcagggacac tttgtcattaataatcgcacgggtcgcatcacagtggcacccggcgtcagcctcgccgtc ggacgatctttcgcgctgaccgtcaaggcgtccgacaacgcgccggagtccctgagaagg agctccatcacaaccgtctacatcgaagtgctgccacccaacaaccagagcccgccgcgc ttccccttgctcacttacaacctggaggtgagcgaagccacaaggattggcgccattctg ctcaatctgcaggccacagacagagaaaacgaccccatcgcatatcgcattgtgagcgga gattcccagaaggtgttcaacctctccgaaacgattggccttctaattttggaaaaagct ttagacagagaaaccgaagagcgctaccgtctggtcgtcaccgcctcggatggcaaccct ggagggacgtcaacgacaacagtcgacatcgtcgtgacggacgtcaatgacaacgaccct gagtttgaccccgccgcccccactaacttcactgtccgagaagaggaggcccatctgttt gtgggacaagtcaaagccacagatccagacgcgggggctaacggccaagtgagcttccgc atcgtcaatcaccccgacttgttcgtcgtcgccgccaacggcagcatctacacccgggtg ccgctggatcgcgagctcagggacagctacgagctggtgatcgaagcctccgacggggcc gtggacccccggcgcaccaccttgaccctcacggtgcgggtgacggacatcgacgacaac agcccgctgttttctcagcagacgtacgtggtgaacgtgcccgagaacagccccgtcgga accgtgatcctcacgctcagcgctaccgattcagacctcttctccaacgtcacctaccgg atcaagtcggaatcggcccgccggctcttttccctgaacgcaatcacgggagaattggcc gtgctgcaaactctggactttgaggatctgactgctatgggaacgggagcctcgtacacc ttccaggtggaagctgtcgaccagggaggcgtcacggccccggggcaggctaccgtcacg gtccggatcacggatatgaacgacttctcccccgtctttagccagcccttgtacaaaggc atggtggcgcccaacgctgagaaggggacggtcatcacgactgtgtttgcagaggacccc gacccagtgggcactccagccagttttgtgcgctacagagtagaccaagacaagtcgccg tatagcggtagcatctttgatgtggaagaagtgaccggaaggattgtcaccaaggtcaac ctcaatgaggagcccagccttacttttaaattgtttgtcatcgcctttgacgacggcgag ccggtgaagacgaatagcaccttggtggagatcaccgtccttcagccctcgcgcattccc atcttcacgcaggaggagtacaggttcccacccgttagcgagctggcgccggtgggtacg ccgttggggaccattctcgccgccgccatcaaccagaccatctactactccatcgtggcg ggaaatgatttaggacatttccgtgtgaacaacagaacgggcgtcatctccaccgccaag ccgctggactatgaaaatgtgaccagctacgtcctgagggtgcaggccgactcgctgctg gttgtcatgtccaacttgcgcgtcccttcgaaaaccaacacggccaaggtgttcctggag gtgcgcgacgagaacgaccaccctccagtcttcaccaggaagctctacataggcggcgtg accgaggacaccaagatcttcagttccgtgctcaagatagtggctaccgatcaggacacc gggaacttcagcgccatggcgtaccgtctcatcatcccgccgacggcggaaggccaggac agctttgtcatcgagacgtacaccggcgtcatcaagtcggccatcatgtttcgaaacatg cgcaggtcttacttcagctttgaggtgatcgccaccgacgactacggcgagggtctgagc agcaacgctgacgtggtggtgtctgtggtcaacgcgttggacatgcaagtgatcgtgtca accgtcccgcccacgttggtcgaagaaaataaagaccaactcataagtatcctggagcgt cacgtccaggaccagatccccggcgccaaggtgattgtggaggccatcgggccgcgtcgc cacggtgacggctttgagctggaggactacagcaagtcggacctgatggtgtacgccatc gacccgcttacaaacagggccatttcgcgccaggagctcttcaaatttctcgacgggaac gttctggaaatcaacaaggagttccagccttacctgggcgagggcggccgaatcctggag atccgctcgccggacatcgtggcaagcgtgaagaaggccgcccaagccgtgggctacacg gagggggctctcctcgctctcgccatcatcatcattctctgctgcatccccgccatcctc atcgtcatggttacgtacaagcagttcaaagagcggcaggctgagtgcgccaaaaccgcc aggattcaaatggctttgccgccgggaggcaaggcagcacccaccagcgctgtgggggcc aacctttacgaagagctcggggatggcagcatgaggcgaggctacgggagacagcatcag caactgctgagaccatctctgctgagacccgaggaactctccatggagtccggcatcgac cccggccaagactactacgcgcaggactactataattatgatcaagggtatgacctccct cagtatggcagtcggaggaggttgattgcgccgatgtacgatgaatatggggaggccatt atggaagatgaccgttattactacagtccgcatggccccgaggggcgaggccgaggaagg ggccgtggcggcgcgaggggccgaggtccaccaaagagggttgcgtttagggatgaggag ggaatcgagccggctgaaccagaagctgacgccgagccctccaaggctgccaagaagctc aaatctgtcatcaaactcagcaaactcctggcagtcagcaagagaggaaagcaggcgtct gctgccgctggcccgtctccatggaagaaagccaaaatgctcaagatgttcggcgccaag caaaaagataaggattatgccaaactgatgtcggcccgccgtattgacagtctggagagt ctgagtgatgggccgtcacccgcgggacccgtcgacagaaagtcgggcgctcgcagccag cttggtcaagttttgaagaaaatcaacatcggtaggaagttgcaggcgcgcagaaagtcg caggggagcgcaagcgtcactggcagcgagagggatgaggaggcctcacaacagacgagc gaggaggagaagaaatcgaaagtgtccattagcgtgacggaaagtgagccagaagcgggg acgagcgggagctccgcgaaggacaaaggctcagatgaggagtcctcggagaaaagcagc gtggacacggagcacctgaaagtggatttagatcgggacgacgccaacgaaagcaccgtg gactcggaagaagagcccgatggagacccggcggattcggatcgcgaaagcacgtctgaa ggggaagaaactgaaaagggatcaatccatgagaaagaatctggtaccgaaagagagtcg ggatccgaaaaagagtccgaatctgagaagccgtcagggacggagaaagagtcggaaaca gagaaagactctggatcagagcaggagtcggaaacagagaaagactccgagtccggatcc atccaagcatctggttcggggaaaggaacagggacggcaacagaaaagggctcagtctca gaatcggatgaggagtcggacgaggaagagaccgccgggagcaccaaagacagtagctcc actgcccgctcatccatcggatcatcagcgactgaggctagcaaggcgagcggtgacact ggcagtgggagtcgacagggtagtggtagtgtgagcggaagcgccactgaaagcaggagt gagagcggtagcaggacccttagcggtcgtggaagcgccaccagtcaaagtacaagcacc cgcacatctgcctctttatctggttcaagtgtgaggtcatcacaaaagaccaaaacgtca gcaagcacgttaacgtctgagaagtccggcgaggggcttagcgaagccgaatcgggaacg ggaacagtcagcgagacagagtcagggtcagctagtgaaggctcttggtctaaagggtcc ggacagagaaaactgtctggttcagactccgtcggtgggtcgtccaatggcagtcagatg actgaggagaattccttgagcagcaagagaagttcctctggtaccgggtccaccagcggc agcctgcgctcccgaaagtccatcctgacacacaggacggaaagcacaatcacagaggag agcgaggaagaagcatcggcatcggagaccgcagacgaaagcaaagagtcagccggcgac gtgagcgacgaggccacgtcgtccgcaaggtccagcgcggcgtccgcaaggtccagcgtg gcgtacgcaggccaagcgccagccgccgcttacgggagccccccatacccctccgacatc aggagcatcagcggcacgtcccaagagacgtacggaggattgtcggcaattaccgaggtt gatgaagacgccatctccacggagaaatctgcttccgaggccagtaaagacaccggagaa agcgaggcgacctcagacggcgattccgagtcggagagggacctcacggccttctag

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