Haliotis cracherodii (black abalone): 139456294
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Entry
139456294 CDS
T10814
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139456294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139456294
03032 DNA replication proteins [BR:
hcra03032
]
139456294
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139456294
mRNA cycle factors
Common to processing body (P body) and stress granule
139456294
DNA replication proteins [BR:
hcra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
139456294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
139456294
NCBI-ProteinID:
XP_071094020
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MKMASKNEVVRITFKELHEIVQNSPKGEQPEKSSDIQKKAQARRRPPIQLYQPGVSRLSK
TKISKELANQERKNSVSDGENWDLDLEQQDTEESGRGSKESSVEPEVNGVTPGGHADAEA
SNQNGTEVGEGGSQKRTPKKSYKRMDNRRRGKRPDIQIYVPKGRLMEQDTRRGDGCNSPD
SVSQPEYESESPYSTLGRSSERGYQSHRRGSDVTSPTSPLPPSPRSPSQRKVDLRFGLRN
MQVTVVNEPGEEDKPVEMSRESGKENVKESYKDNIARERAKERQELLSTLRAARANSETL
DSPELSRRLNKPSRLSLSRQNSLADTQSENENYPDTNDSEMKENVYKSRTSRSRGGGKRG
GKRHSFSAMRRQRTGSFSSDVSASSDVSLEEEFQQEPKPLDWVQEMEQELARQVQDEAQR
LNDYLESCVAGYPGDMDQAAPPEPKPKYEKAHPEKASIAKDMIRSQEFRGRRKERRRRPS
GTESRESSVHSNYQDEDPWAPRIRPARRHKKRHSSAGSRGKKDKMDNFSDVGTDGSRRRR
HDSHGGSSKEGGRRDFYERRHNSHELDIGSKREGFRRGRHDSYGESPRDNVNIKVTLDRN
QRQVKVSGEQTRSESDMSSSQHAHSGGLLHLPGHQAKQQEHYQEEQTDAGMMASHHMKNR
DQTQDQSRKMLFDPRNPNKPIVITNSKIKGPDKREMASSPQESNRSTPPTTMPQQHPPPQ
PPQPHPQQYYQDYRQGFTYPEMPYPGPAYGGMPPHPAAMFGYPQFPFKECGLYTDDTYTR
DPYYHGGYDPDQVIGGRSKSQCRAMSEQLLRDTQPLDNQLNNLLSRRISGDDGWRRITKL
RDELRSRYEQVIFLDADVSNKHGVEQLLWKSVYYQVIEVFRRHLGEDEEGDFKDKLHTVL
NEGTEFFQNLLQKLQSTYSFNIDVFLDVNNPPGDNISRSVKLALLSVQRTYIFLGDIARY
REQANETTNYGRARNWYMKAQQIAPKNGRPYNQLAILAMYTRRKLDAVYYYMRSLAASNP
FLTARESLMSVFEDVRKKAEATEQKRLADKEKLKKLKQRRQQDGPRVEIWVSHDGKSVED
KVDETHEEDLTNLSAIELNKRFVLNFLNVHGKLFTKIGMETFPEGSCLMLREFEALLQNS
PVVISSNRLIQLMAINMFAVENTALKDESLGETCRSLLQEHAVQLGLDMFGLLIKNCSDL
LTSHLRSTDYPAQLLNEDLHQLVPGVKSWSDWMMCHPALWNPPPSLRPPDLGLDIDVWKG
MSDLCNVLTGLDTSHVKIYRDRRESCEPIVLSEDAMMAGFIPMLSSLVESCYIHATTDKE
VAKDCLRLEKLRLFGEYLCGIEPPMLSYNVETKLYFSVALATSISEEKDRKRGTNSSDSD
DVIIESEDEADVESGEEDHVRHLKARRQELQKKKDEQTRHQENVQAILDENRHRRIELEI
HPIFLIPDTNCFIDHLPGLKRILNSHKYTLVVPLVVINELDGLAKGSREGQYETAEHAGI
VKSRSQQAIIFLEEEFERKNSHIRAQTSKGSILETISFRSEETDATGNNDDLILSCCLHY
CKDKARDFMPKSRDASVRLYRDVVLLTDDRNLCLKAHTSNVPVKDVTSFKRWSNIT
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcgtctaaaaacgaagttgtaaggataacattcaaagaattacacgaaatc
gttcaaaattcacccaaaggagagcaacccgagaagtcttcagatattcagaaaaaagct
caagctcgacgacgccctccaatacaattatatcagccaggtgtctctcggttgagtaaa
acaaaaatatccaaagaacttgccaaccaggaaagaaaaaacagtgtctccgatggagag
aactgggatttagatttagagcagcaggacacagaggaaagtggtagaggcagcaaggag
agcagtgttgaacctgaggtcaatggggtcacacctggaggtcatgcagatgcagaagca
tccaatcaaaatgggacagaagtaggtgaaggtggttctcaaaagcgaactcctaagaag
tcctataaaaggatggataatcgcagaagagggaaaagacctgatattcagatatacgtt
ccaaagggacgtttgatggaacaggacactagaaggggagatggttgcaatagtcctgat
tcggtttcacagcctgagtatgaatcagaaagtccatattccaccctaggtagaagctca
gaaagaggttatcagagtcacagaagaggatcagatgttactagtcccacctccccatta
ccccctagtcccaggtctccctcccaaaggaaagtagaccttcgttttggtttacgcaac
atgcaagtgactgttgttaatgagccaggtgaggaagataaacccgttgaaatgtctaga
gaatctgggaaggagaatgtgaaagaaagttataaagataacattgcgagagaacgggct
aaagagagacaagaacttctgagcactctgagagctgctcgagctaattctgaaacttta
gactcgccagagctttcacgaagacttaacaaaccgtcaaggttgtctctatccaggcag
aactcacttgcagatactcagtctgaaaatgaaaactatcctgacacaaatgacagtgaa
atgaaggaaaatgtgtacaaatccagaacatcgcgatctcggggtggggggaagagggga
ggcaaacgtcactcgttctcggcaatgcgcaggcagagaactggcagcttcagtagtgac
gtgagtgccagcagtgatgtaagtctggaggaggagttccaacaggagccgaaaccactg
gactgggtgcaggagatggagcaggagttggccaggcaggtgcaggatgaagcccagaga
ctcaatgactacctcgagagttgtgtcgcgggttacccaggagatatggatcaggcagca
cctccagaacccaaacccaaatatgaaaaagcccatcctgaaaaagcatccattgcaaag
gacatgatacgatctcaggaattccgtggccgcaggaaggagaggagacgtaggccttca
ggaacggagagtcgagagtcaagtgttcacagtaattatcaggatgaagatccctgggcg
ccacggatcagaccagcacggcgtcataaaaaacggcattcatcagctggatcaagaggg
aagaaggataagatggataattttagtgatgttgggaccgatggaagcaggagaaggagg
catgacagtcatggcggcagctcgaaggaaggggggaggagagatttctatgaaaggagg
cataattcacatgagcttgacattgggtcaaagcgggagggatttaggcggggcaggcat
gacagctatggtgaatctcccagagacaatgttaatatcaaggttactttggataggaat
cagagacaagttaaagtgtctggtgagcagactcgatccgagtccgacatgtccagttct
caacatgcacattctggtggactgctccatctcccagggcatcaggccaagcagcaagaa
cattatcaggaagagcaaacagatgctggcatgatggcaagtcatcatatgaagaacaga
gaccagactcaggatcaaagcaggaaaatgctttttgatccaaggaatccaaacaagcca
attgtaatcaccaactcaaaaatcaaaggtccggataaacgtgagatggcttcatcacca
caggaatcaaatcgcagcaccccaccaactactatgcctcagcagcatccacccccacaa
ccaccccagccccaccctcaacagtactatcaagactaccgtcagggattcacttaccca
gagatgccgtaccctggcccagcatatggcggcatgccaccacacccggcagctatgttt
ggttaccctcagtttccattcaaagagtgtggcctctacactgatgacacctacactaga
gacccctattatcatggtggctacgatcctgaccaggtaattggaggccggtcgaagtcc
caatgtcgagccatgtccgagcagctactccgtgatacccagccactggacaatcaactc
aacaacctcctgtctcgcagaatctcgggtgatgatgggtggaggagaatcaccaaactc
agggatgaactacgtagtcgttacgagcaggttattttcctggatgcggatgtctccaac
aagcatggtgtagagcagctgctgtggaagtctgtgtactaccaggtgatcgaggtgttc
cggcgtcacctgggggaggatgaagagggggacttcaaggacaaactccatactgtcctc
aatgaaggtaccgagtttttccagaaccttcttcagaagctgcagtctacatacagtttc
aacattgatgtgttcttggacgtgaacaaccctcctggcgacaacatcagtcgatcggtc
aaactggccctcctcagcgtccagaggacctacatcttcctgggagacattgcccgatat
cgggaacaggctaatgaaaccacaaactacgggagagctcgaaattggtacatgaaagca
caacagattgctcctaaaaatggaagaccttataatcaacttgcaattctagccatgtat
acgaggaggaagcttgatgctgtgtactactacatgaggagtctggccgccagcaacccc
ttcctcacagcgagggagagtctcatgtcagtctttgaagatgtcaggaaaaaggctgaa
gctacagaacagaagagattggccgacaaggaaaaactgaagaagttgaaacagaggcga
cagcaagacggcccccgggttgagatctgggtgtctcatgatggcaagagtgtggaggat
aaggttgatgagacgcatgaagaagacctcactaatctttctgctatagagctcaacaag
cggtttgtgcttaatttccttaatgttcatgggaaactcttcactaagataggtatggag
acattcccggaaggcagctgcctgatgttgcgagagtttgaagctctcctgcagaactcc
ccggttgtcatcagcagcaacaggctgatacagctgatggccatcaatatgtttgctgtg
gaaaacacagctcttaaggatgaaagtcttggagagacgtgccggtcactgcttcaggaa
catgctgtccagctgggtctggacatgtttgggctgctgatcaagaactgttccgatctc
ctgacctcccacctcaggtccacagactaccccgcccagctgctaaatgaggacctgcac
cagcttgtccctggtgtcaagtcctggtctgactggatgatgtgtcatcctgctctgtgg
aacccccctccatcactccggcctccagacctcgggcttgacattgatgtgtggaagggg
atgtcggacctgtgtaacgtgctcacagggctggacacgtcacatgtcaaaatctacaga
gacaggcgggaaagctgtgaacccatcgtcctgagtgaggatgcgatgatggctggcttc
atcccaatgttgagttcactggtggagagctgctacatacatgcaaccacagataaggaa
gttgccaaggattgcctaagactagaaaagctccgcctgtttggagaatacctatgtggt
attgagccacccatgctctcctacaatgttgaaacaaagctgtacttctcagttgccttg
gctacctcaatcagcgaagaaaaagacagaaaaagaggcactaattcctcagactctgat
gatgtgataattgagagtgaagatgaggctgatgttgagagtggtgaggaggatcatgtc
cgccatctgaaggcccggaggcaagagctgcagaagaagaaggatgaacagaccaggcac
caggagaacgtccaggcaatacttgatgagaatcgtcatcgtcgaattgaacttgaaatc
catcctatcttcctcatcccggacaccaactgcttcatcgaccatctgccaggactgaaa
agaatcctcaactcccacaaatacaccctggttgtccccctcgttgtcatcaatgagcta
gacggcctagccaaaggaagccgtgaaggccagtatgagacagctgagcatgctgggata
gtcaagtcaaggtctcagcaagccatcattttccttgaggaggaattcgaaaggaagaat
tcccatatacgagctcagacttccaaaggttccatattggagacaatatcattcaggagt
gaagagacagatgcgacaggcaacaatgatgacttgatcttgtcctgctgtcttcattat
tgtaaagataaggccagagacttcatgccaaagagtagagatgcgtcagtcagactgtat
cgggatgtagtacttctgacagatgacaggaacttgtgtctcaaggcgcatacatcgaat
gtccctgtcaaagatgtgacatccttcaaaaggtggagtaacattacgtga
DBGET
integrated database retrieval system
