Haliotis cracherodii (black abalone): 139464898
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Entry
139464898 CDS
T10814
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139464898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcra03041
]
139464898
Spliceosome [BR:
hcra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139464898
Complex C
U5 SnRNP specific factors
139464898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
Motif
Other DBs
NCBI-GeneID:
139464898
NCBI-ProteinID:
XP_071102577
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDDDDEEDDRDDDEYMDRDDDEDMDHDDMDDQPEMAVVLH
EDKKYYPTAEEVYGPDVETIVQEEDTQPLTEPIIAPVKKKKFSMAEQDLPETTYNMEFLA
DLMDSPELIRNVTLCGHLHHGKTSFVDCLLEQTHPNIQGRADKDMRYTDTLFTEQERGVS
IKSTPITVVMQDTKNKSYLINVFDAPGHVNFSDEATAAMRLSDGVCIFVDAAEGVMLNTE
RLIKHALHEKLAITICINKIDRLILELKLPPTDAYYKLRNILDEINGVISMYSEEEDGLM
ISPLLGNVSFASSYYRFCFTLKSFGKIYADTYGGINEKEFARRLWGDIYFNSKTRKFTKK
PAHNTSQRSFVEFILEPLYKIFAQIVGDVDECLPRVCDELGIHLTKEEQKLNIKPLMRLI
GRRFFGDFTGFVDMCVEHIHSPVKNAKSKIEHIYTGPADSELAEDMTHCDPDGPLMIHTT
KLFPTSDGTSFHVFGRVLSGTLYSNQEVRILGENYTLQDEEDSRFGQVGRLWIAEARYKV
EVNRVPAGNWVLIEGIDQPIVKTSTITDTSSNEEVYIFRPLKFNTSSVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQITWPRKKLGEFFQ
TKYDWDLLAARSIWAFGPDAMGPNILVDDTLPSEVDKSVLGLVKDSIVQGFQWATREGPL
CDEPIRNVKFKILDAMIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYNFVEVMAP
ADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLL
ELAKQDVMLNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgagtttggcaactatattggccccgaactggacagtgat
gatgatgacgatgatgaggaagatgatcgtgatgacgatgaatacatggacagagatgat
gatgaagacatggatcatgatgatatggacgaccagccggagatggccgtggtgctgcac
gaggacaagaagtactaccccaccgcggaggaggtgtacgggccagatgtggagactata
gtacaagaggaagacacacagcccttaacggaacccatcatagcgccagtgaaaaagaaa
aagttttccatggccgagcaagatcttccagaaactacatacaatatggagtttctggct
gatttaatggactctccagagctgatacgaaatgtcacactttgtggacatctccatcat
ggcaagacatccttcgtcgactgcctgctggagcagactcaccccaacatccagggccga
gcagacaaggatatgcgatacactgacactctcttcacagaacaggagcggggtgtgagc
atcaagtcaacgcccatcaccgtggtgatgcaggacacaaagaacaagtcctacctcatc
aacgtcttcgatgctccaggccatgtgaacttctccgatgaggctactgcggcaatgagg
ctgagtgatggtgtctgcatttttgtcgacgctgctgaaggagtgatgttgaataccgaa
cgtcttatcaagcacgcactccatgagaaactagccatcaccatctgcatcaacaagatc
gaccgcctcatccttgagctgaagctgcccccgaccgacgcctactacaagttgcgcaac
atcctggacgagatcaacggtgtcatcagcatgtactcggaggaggaggatgggctgatg
atctcgccgctgctaggcaacgtcagcttcgccagctcctactaccgcttctgtttcaca
ctcaagtccttcggcaagatctacgccgacacgtacggtggcatcaatgagaaggagttt
gctcgaagactctggggagacatttatttcaacagtaaaacgaggaagttcacaaagaag
ccagcccacaacacgtcccagagaagcttcgtggagttcatcctcgaacccctgtacaag
atatttgcccagattgtcggggacgtcgatgagtgtctgccgcgggtgtgtgacgagctc
ggcatccatctgacaaaggaggagcagaaactgaacatcaaaccgctgatgaggctgatt
gggcgccgcttctttggggacttcacagggtttgtggatatgtgtgtggagcacatccac
tcccccgtcaagaacgcaaagagtaaaatcgaacacatctacaccggcccggccgactcc
gagctggcagaggatatgacccactgtgacccggatggccccctgatgatccacaccaca
aaactgttcccgacgtcagatgggacgagcttccatgtgtttggtcgtgtgttgagtgga
actctctactccaaccaggaagtgaggattcttggagagaactacacactgcaagacgag
gaggactcgcgcttcggacaggtcggacgtctgtggattgctgaagcaaggtataaggta
gaggtgaacagagtccctgctgggaactgggtgctgatagagggcattgaccagcccatc
gtgaagacctccaccatcacagacacttccagcaacgaggaggtgtatatattccgcccc
ctcaagttcaacacaagctctgtcatcaaaatcgcagtggagccagtgaatccgtccgaa
ctgcctaaaatgttggatgggttgaggaaggtgaacaagagttatcccctcctgaccacc
aaggttgaggagtcaggcgagcacatcatcctcgggacgggggagctgtacctggactgt
gtgatgcacgacctccgcaagatgtactccgagatagacatcaaggtggctgacccagtc
gtgtccttctgtgagacggtggtggaaacatcgtcactcaagtgcttcgctgaaacacca
aacaagaagaacaagttgaccatgattgcggagcccctggagaagggtctggcggaggac
attgagaacgaggtggtgcagatcacatggcccaggaagaagctcggagagttcttccag
accaaatacgactgggatttgctggctgctcgatctatctgggccttcggacctgacgca
atgggacccaacatcttggtggacgatactctgccatccgaggttgacaagtcagtcctg
gggttggtgaaggacagcatcgtgcagggattccagtgggcaaccagagaaggaccgctg
tgtgatgaaccaattcgtaacgtaaagttcaagatcctagatgccatgattgccggggag
ccgatacaccgaggtggcggtcagatcatccctacagccaggagagtggcctactccgcc
ttcctcatggccaccccacgtatgatggagccctacaacttcgtggaggtgatggcgcca
gctgactgtgtgtctgcggtctacacagtgctggcaaagaggaggggtcatgtgacccag
gatgctcctgtgcctggctccccactgtacacgatcaaggctttcctgcccgccatcgac
tcgtttgggtttgagaccgatctgagaacacacacacagggccaggccttttgtctctcg
gtcttccaccactggcagatcgtgcccggtgaccccctggacaaatccatcatcatccgc
cccctggagccgcagcccgcaacgcatcttgcccgggagttcatgatcaagacacggaga
cgcaagggtctgagcgaggatgtatccatcaacaagttcttcgacgaccctatgttgttg
gagttggccaagcaggacgtgatgctcaactaccccatgtag
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