Haliotis cracherodii (black abalone): 139469619
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Entry
139469619 CDS
T10814
Name
(RefSeq) short transient receptor potential channel 7-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcra04040
]
139469619
Ion channels [BR:
hcra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139469619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Caveolin
DUF3734
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
139469619
NCBI-ProteinID:
XP_071107940
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MSKTMLPSCIVYNSPYSSPSRGLDHYGAADKRASTMPSQGSLFTNFEDVQLTDEERVFLN
AAYLGDVGIVRQSLEESGESSLNVNCVDYMGRNALHLAIDSEKLDVIEILLDNLSFNCIE
EALLHAISKGGTKIVKLIIEHPNFMAGEDRLRRLGGGEAFFRTEEKSQFPPDITPVILAA
HYNNHEIIQMFLSRNHTIEKPHPISCKCSDCVAKQNYDSLKRSRSRLNAYRALASPAYMA
LSSPDPIMTTFELRQEMMKLAEVEKEFKNEYLGMVEQCMNFACELMDLCRGTQEVEAVLS
ESGETTQRDPLARLKQAIRYEEKKFVAHPNCQQHMTSIWYGSEMGFLQSLNWFRKLIYLI
LFLPAIPFMCIAYVFAPNIKFGRIMRCPVTKFITHTTSHICFLILLAAATFRITESGETI
TSTTEINETKYAHLSSEEKIQNILKETLRPASTLITHVQICIVFWILGLLWIECKQVYIS
GARAYTTDYYNFIDFSVLSMYLASYVLRFFTEYQVAAADRTSNGTNRARELLMQQNHTYF
HLLVAEIKNPNHKINYFMEASRFHWEANDPEIVSDVLFAIANVISFARTTYLMPAFEVLG
PLQISLGRMIGDITRFMVLFTLVLFAFMVGLHNLYWYYGAQKIKMEINGNLVSVHAAKAF
QGLRQTFYSLFWSMFGQVSMSDITVMHPEPDGVKKCQVLDSERGDIYCTDGSKRDPNTPP
VFKSTLYGSSHHDSSTSIVESVGMYLFGIYHVVIIIVLINMLIAMMSHSFEDIQTDCDVE
WKFARTKLWLNYMDEGSTLPVPFNMIPTPKSFYYVYIFFKDLIKHSKNGFLEYEKNRKQT
FLKKRRETVCKTLDLKPDETSYIDIMHRLVKRYLFKLERAKDETALKDMGNIRAEEVEFI
EAPDVPPPPIPSDTPSRIPFATPPIPEEEGEDNSKADGRASALSKRKASNRSHHTRRTSM
ANVPMTTTLAIPQLDAIQRSQKLLDVRLQHLQANSKENNRLQDDVEFIRKLMTENQKALC
NVVQALANIQGEIVNLAQCLKPAPRPQSNAIPNAHGQTNAVSSNRASRKRSGPEEDDTKV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacgatgttaccttcgtgtatcgtgtataactcaccgtattcatctccctct
aggggcctcgaccactacggtgctgccgacaagagggcgtccaccatgccgtcccagggg
tctctcttcaccaactttgaggacgtgcagttgacggatgaggagcgcgtgttcctcaac
gctgcataccttggtgatgtagggattgtccgtcagtctcttgaagagagcggagagtcg
agtctcaacgtcaactgtgtcgactacatgggccgcaatgctctccatctggccatcgac
agcgagaagctggacgtcattgagatcctccttgacaatctctctttcaactgcatcgag
gaggcgcttttacacgccatcagcaagggaggaactaaaattgtcaagcttatcatcgaa
catccgaacttcatggccggagaggataggttgcggagactggggggaggggaggcgttc
ttcaggacagaggagaaatctcagttcccccctgatatcacccccgttatattggccgca
cattataataaccacgagattattcagatgtttctctcacggaatcataccatagagaaa
ccccatcctatctcgtgcaagtgcagtgattgtgtcgctaaacagaattatgattcgtta
aaaaggtcaaggtcacgtttgaacgcttaccgcgcgcttgcaagtccagcgtacatggct
ctgtctagccctgaccccatcatgacgacctttgaactgcgacaggaaatgatgaagcta
gcggaagtggaaaaagagttcaagaacgagtacctgggcatggtggagcagtgtatgaac
ttcgcctgtgagctgatggacttgtgtcggggcacccaggaggtggaggctgtgctcagt
gagagtggggagaccacccagcgggaccccctggccagactcaagcaggctatccggtat
gaggaaaagaagttcgtggcgcaccccaactgtcaacaacacatgactagcatctggtac
ggctctgagatgggattcttgcagtcgctcaactggttccgcaaactcatatatctcatc
ctcttccttcccgccattccattcatgtgtatagcctatgtcttcgcgcctaatatcaag
tttgggcgcatcatgcgctgcccagtgacgaagttcatcacgcacacgacgtcacacatc
tgtttcctcatcctcctggcggccgccacgttccgcatcaccgagtcaggggagacaatc
acctccaccactgagattaatgaaaccaagtacgcccatctcagcagcgaggagaagata
cagaatatcttgaaggaaaccctccgcccagcgagtactctcatcactcatgtgcagatc
tgtatagtattttggatattaggtcttctatggattgaatgcaaacaagtgtacatctca
ggagcccgggcttacaccacggactattataacttcattgattttagtgtcttatctatg
tatctagcatcatacgtccttcgattcttcacggagtaccaggtagcggcggccgacagg
acgtccaatggcactaatcgggcgagagaactacttatgcaacaaaaccacacatacttc
catcttctggttgctgagattaagaacccgaaccataagatcaattacttcatggaagca
tcacggttccattgggaagccaacgaccctgagattgtctccgacgtcttgttcgccatt
gccaacgtcatcagctttgcacgcaccacctacctcatgccagccttcgaggtgttgggc
cccctgcagatatccctagggcgcatgatcggcgatatcaccaggttcatggtgctgttt
accctggtactattcgccttcatggtgggcctgcacaacttgtactggtactacggggcg
cagaaaatcaagatggagatcaatggcaatctcgtcagcgttcacgcagcgaaagcattc
caagggttgcgacagacgttctacagcctgttctggtccatgttcggccaggtgagcatg
agtgacatcaccgtcatgcatccggaacctgatggagtcaaaaaatgtcaagttctagac
agtgagcgtggcgacatatactgtaccgacggcagcaaacgagatcccaacacgccccca
gtgttcaagtctaccttgtacgggtcgtctcatcatgacagcagcacgtccatcgtcgag
agtgtcgggatgtacctgttcggtatctaccacgttgtcatcatcatcgtcctcatcaac
atgctcattgctatgatgagccactccttcgaagacattcagaccgactgtgacgtggag
tggaagttcgcccgtacgaagctgtggttgaactacatggacgagggcagcaccctgccc
gtccccttcaacatgatcccgacgcccaagtccttctattatgtgtatatattctttaaa
gacttgataaagcatagcaaaaatggattcctagaatatgaaaagaatagaaagcagacg
tttctgaagaagcgtcgagagacagtgtgcaaaacgttggacttaaagcctgatgagacg
tcgtatatagacatcatgcacaggctagtaaagagatacctcttcaagctggagagagct
aaagatgaaactgccttgaaagacatgggcaacatcagagcggaggaggtggagttcata
gaagccccagacgtccccccgccaccaatacctagcgacacacccagccggatacccttc
gccacgccccctataccagaggaggaaggggaggataactctaaagctgacggtcgggcc
tccgccctgtcaaagaggaaggccagtaaccggagccaccacacccggcgaacgtccatg
gccaacgttcccatgacaacgaccctggctataccccagctggacgccatccagaggtcc
cagaagctccttgacgtgcggctccagcacctgcaggccaacagcaaggagaacaaccgt
ctccaggacgacgtagagttcatacgcaagttgatgacggagaaccaaaaagctttgtgt
aatgtggtgcaggcgttggccaacattcagggggaaattgtcaacttggctcagtgccta
aagccagcaccgaggcctcagtcaaacgccattcctaacgcccatgggcagactaacgca
gtgtcgtccaatcgtgcttccaggaagagatccggtcctgaggaggacgataccaaggtc
tga
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