Haliotis cracherodii (black abalone): 139474232
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Entry
139474232 CDS
T10814
Name
(RefSeq) guanine nucleotide exchange protein SMCR8-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139474232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139474232
Membrane trafficking [BR:
hcra04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
139474232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
zf-C2H2_STOP2_3rd
Motif
Other DBs
NCBI-GeneID:
139474232
NCBI-ProteinID:
XP_071113254
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MIGAEYAQFTSYIPSENLVSDPDKMFLPSYLLPTFHVPQPWTSRTNRAGFEEDFIIVAEF
SEIEGPKPVMLIPKNGGGNFDQNTFSVKIMAVDHQTNSVGFSISEDTQVVISEDRDGVYS
FVHHFVLYDNEARGFVRPFCMAYVTSERRKIMTFYEELSAQFRKVARFLKYGNRMVFVRD
LDRYLSDLDFTKGQLRMKKTSHPESESGEEERRHAEEETYQDLQNILASMDEVKEILTTL
RPLLNDRRVECRFQTLEDRAYHQKLKAETTNVDTLSLEENFFSEGKASATFRCGSFNGAA
DTTLSLFQRHRTYTPKIVPPNRRKKFDSALRGLHELCSWGAKEGLKKLRCIQEHYKRETM
VLELERSESNLLDPPGSLMTCGRCVTSNFLTGISMRGLDMSSSLADASLSTPGSDIMKRW
PSSDTLDSFKSVGSFVSLQDEDGDIMSLGSADGHVSFDSQGFQYPSVPASPISSPTKSPF
YRLGSSCESESTSSIYHTDEASSTASPSQPPSAPQTPSLASPTQPPSYPQTANPASPTQP
SVPQTPNPASPTQPSAPQTPNPASPTQPSTPQTPSRASPTQPSAPQTPSLASPTQPSAPQ
TPNPASPTQPSAPQTPSLASPTQPPVPQTPSLGSPAQPATLQTPNPASPSCPASAPQTTN
LAQTPAPTSNPPHTEPTPDTADLSLRLSPTDSVTSPPDQAMDKDQSRVCCDHGHGDSGET
VTEGQTTSYGQQRMMSRQISADTSCSECSISPSRYVQYTDKQAEMQCFSALDHTPDLQSA
NKYMGSSQEDTSGDTVPSTSSGEDTGPTSTCSTPPSRKPKAGLYSLGDLMEKLGPGVPGY
GIVNVLLSCNNLQHILYSLLIGRTVLVVGSPRLEGEVIRIVTALALFLPDHRRKHPSMIE
WLSKPFRLTDLARTKLAGVCRPEKRSLESVVPNVVKKYSSIIDVDRQGILAPKYQGNLLT
ALINKKKVFNTDTEFVGFIHCWLMELSSKAFIFYHSFCLGTAGIMYDQNLQRQKEQYQST
VRSFIAKLGVTDDDIHIVEYLAEIVKMSEIEPHVRLTQVGGGVARPITLNYLPCQMQPLR
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgattggagccgagtatgcccagttcacctcgtacattccgagtgagaacctggtgtcg
gatcctgacaagatgttcctgccgtcctatcttctgcctacatttcatgtccctcagcca
tggacaagtaggacaaacagagcgggctttgaggaggatttcatcattgtggccgaattt
tcagaaatagagggccccaaaccagtgatgctgatacccaaaaacggtggaggaaacttt
gaccaaaacactttttctgtgaaaatcatggcggttgaccaccaaacaaactctgtagga
tttagcatttccgaggatacacaggttgttatatcagaagacagggatggagtctacagc
tttgttcaccattttgtattgtatgacaatgaagctcgtggttttgtacgtcctttctgt
atggcctatgtcaccagtgagagaaggaaaattatgactttctatgaagagctttcggca
cagttcagaaaggtagctcgctttttgaagtacggaaatagaatggtctttgtccgtgac
cttgaccgatacctcagtgacctggattttacaaaagggcagttgaggatgaagaaaaca
tcacatccagaatctgagtctggggaggaagagaggcgtcatgcagaggaagaaacgtac
caagacctacagaatattctagcgtcaatggacgaggtgaaggaaatcctcacaacgctc
cggcccctactgaatgaccgccgagttgaatgtcggtttcaaacactggaagaccgtgct
tatcaccagaagttaaaagctgagacaaccaatgtggacacactaagtttggaggagaac
ttcttctcggagggaaaagccagtgctactttcagatgtggatccttcaatggtgcagca
gacacgacgttgtcattgttccagaggcatcgcacctacactccgaagattgttcccccg
aatagaagaaagaagtttgacagcgcattgaggggtctccacgagttgtgttcctgggga
gcgaaggaggggctgaagaaactgagatgcatccaggagcactataaaagggagacaatg
gttttagaactggagagaagcgaatccaaccttctagatccacctggctcactgatgacc
tgtggacgatgtgtgacctccaactttctcacagggatctccatgcgtggtttagacatg
tcgtccagtctagccgacgcaagtctgtctactcccggctcagacatcatgaagaggtgg
ccttcgagtgacacactagatagcttcaagtcagttgggtcctttgtctctcttcaagat
gaagatggcgatatcatgtctttgggatcggctgatggacatgtcagttttgactcccag
ggatttcaatacccctcagttcctgcctcccccatcagctcaccaaccaagtcccccttc
taccgtctaggcagcagttgtgagagcgagtccaccagcagtatctaccacacagacgaa
gcatccagcaccgcatccccatctcaaccaccctccgctccgcagacaccaagcctagca
tccccgacccaaccaccatcctatcctcagacagcaaacccagcatccccaactcaaccc
tccgttccacaaacaccaaacccagcatccccaactcaaccctctgctccccagacacca
aacccagcatccccaactcaaccctctactccccagacaccaagccgagcatccccaact
caaccctctgctccccagacaccaagcctagcatccccaactcaaccctctgctccccag
acaccaaacccagcatccccaactcaaccctctgctccccagacaccaagcctagcatcc
ccgactcaaccccccgttccacaaacaccaagcctaggatctccagctcagcccgccact
cttcagacaccaaacccagcatccccatcttgcccagcctccgctccccagacaaccaac
ttggcacagacacctgcccccacatccaatccaccccacactgagccaacacctgacaca
gctgacctctcactgaggttatcaccgactgactcggtcacttctccacctgaccaggcc
atggacaaggaccagagtcgtgtctgttgtgaccatggtcatggagactccggagagaca
gtgaccgaaggtcaaactacaagctatggtcaacaacggatgatgtcgcggcaaataagt
gccgacacctcgtgttccgaatgttccatttctccgtctcggtacgtgcaatacacagat
aaacaggctgagatgcagtgtttctcagcgctggaccatacgccagacttgcagtcagcc
aacaagtacatgggttccagccaggaagacacttcgggtgatactgtgcccagcaccagc
agcggagaagacacgggaccaacatccacctgctccacgccaccgtccaggaaacccaag
gcagggttgtacagtctgggggacctgatggagaagctgggaccgggggtgccaggatat
ggcattgttaatgtactactctcctgcaacaacctacaacacatactctacagcttgctg
attggtcgaacagtccttgttgtcggctcgccgagactagaaggggaggtaatcaggatt
gtcacagcattggctctgttcctgccagaccaccggaggaaacacccatctatgatagaa
tggctatccaagccctttagactcacagatctagcccgtacaaagctggctggtgtgtgt
cggccggagaaacgatcactggagtctgtggtgcccaatgtcgtcaagaaatattcctcc
ataattgatgttgacagacaaggcatcctagctcccaaataccagggtaatcttctgaca
gcattgataaacaagaagaaggtcttcaatacagacacagaatttgtaggctttattcac
tgctggttgatggagttatcatccaaggccttcatcttctaccactccttctgcctgggc
actgccggcatcatgtatgaccagaacctgcagagacagaaggaacaataccagagcact
gtgaggagcttcatagccaagctgggggtcactgatgatgatattcatatagtagagtat
ttggctgagatcgtgaagatgtcagagattgagccgcacgtacgactaactcaagttgga
ggtggtgttgccagaccgatcacactgaattacctcccttgtcagatgcagcctctgagg
ttctga
DBGET
integrated database retrieval system
