Hymenobacter canadensis: O3303_00590
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Entry
O3303_00590 CDS
T09156
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_00590
01503 Cationic antimicrobial peptide (CAMP) resistance
O3303_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcw03036
]
O3303_00590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_00590
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_00590
Chromosome and associated proteins [BR:
hcw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
O3303_00590
Transporters [BR:
hcw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
O3303_00590
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O3303_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_LcnD
HH_AAEA_pHBA
CzcB_C
Biotin_lipoyl
BSH_YhbJ
HH_AprE
HH_EMRA
BSH_YknX
DUF4719
BSH_RND_rel
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
WBA42069
UniProt:
A0ABY7LR62
LinkDB
All DBs
Position
complement(129935..131092)
Genome browser
AA seq
385 aa
AA seq
DB search
MQTQEHEPAELQAAEETPGKSHGLRWLIIAVVLIAALAFVKITYFPSPNADVKGGGKGAA
GGGKGAPGGKSGGGGGLPVQVYVVKPTNLSDEVAATGSILADESVVIKSELSGKITSLNI
KEGQPVSKGQLLFSINADEAQAAIRKQQYNIKLFRDQEKRQRTLLDKEYISAQEYEQSNN
QLLTAQSDLKALQASLDRAYVRAPFSGVLGLTTATVGTYVSPGSEITTLSRVRPVKIDFA
VPGRFATKVRVGDVVSITDEGTNKKYEAKVYAIDPQIDPVSRTQPVRARYANTNNELRPG
AFVKVNLQLGESTDALQVPTEAVIPEASGYSVYTVKDGKMVPKKIKIGIRSDKVIQITDG
LAVGDSVIRTGILQVKPGDAVKATK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcaggaacacgaaccagcagaactacaggccgccgaagaaacccccggcaaa
agccacgggctgcgctggctgatcattgccgtggtactcattgccgcgctggcgttcgtc
aagataacgtatttcccctctcctaacgccgatgtcaaaggcggcggtaaaggggcggct
ggcggtggcaagggtgccccgggcggcaaaagtggcgggggcggtggcctgccggtgcag
gtgtatgtggtgaagccgaccaacctctccgacgaggtagcggccaccggctccattctg
gccgacgagtcggtggttatcaaaagtgagctatcgggcaaaatcaccagcctgaacata
aaagaaggccagccggtgagcaagggccagttgctgttcagcatcaacgccgatgaggcc
caggcggccatccgcaagcagcagtacaacatcaagctcttccgcgaccaagaaaagcgc
cagcgcacgctgctggacaaggagtacatcagcgcccaggagtacgagcagtccaacaac
cagctgctcacggcgcagtcggacctgaaggcgctgcaggcctcgctggaccgggcctac
gtacgggcgccgttcagcggcgtgctgggcctgaccacggccaccgtgggcacctacgtg
agcccaggctctgaaataacgaccctttcccgcgtgcggcccgtgaaaatcgactttgct
gtaccgggccgctttgctaccaaagtgcgcgtgggcgacgtagtgagcatcaccgacgaa
ggcactaacaagaagtacgaggccaaggtctacgccatcgacccgcagattgaccccgtg
agccgcacccagccggtgcgcgcccgctacgccaacaccaacaacgagctgcgccccggc
gctttcgtgaaagtgaacctacagctcggcgaatccaccgacgcgctgcaggtgccgacg
gaagccgtaattccggaggccagcggctacagcgtctacaccgtgaaggacggcaagatg
gtacccaagaaaatcaagattggcatccgctccgataaggtgattcaaatcaccgacggc
ctggccgtaggcgactccgtaattcgcaccggcattctgcaggtgaaacccggcgacgcg
gtgaaggccaccaagtaa
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