Hymenobacter canadensis: O3303_18815
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Entry
O3303_18815 CDS
T09156
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_18815
01503 Cationic antimicrobial peptide (CAMP) resistance
O3303_18815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_18815
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_18815
Transporters [BR:
hcw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
O3303_18815
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O3303_18815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WBA41847
LinkDB
All DBs
Position
complement(4394195..4397422)
Genome browser
AA seq
1075 aa
AA seq
DB search
MIAETFIRRPVTAIVTSLVIVLVGVLAILNLPVGQYPEITPPTVSVSGTYTGADAQTVEQ
TVATPVEVQVNGTPGMTYLQSNSTSNGQMSMTVNFEVGTDINIAALDVQNRVGIAQPTLP
QEVQRLGLVVRKRNPSILMLVAMYAPKGTHNTTFLDNYANVFVKDALLRTKGVGDIVSRA
DDFSMRVWLKPDKLSQLGVTAQEVTAAIQEQNAQIAAGSIGAPPAQTGQTFEYIVFVKGR
LTNTEEFGNVIVKTRPDDGSVVYLKDVARLELGKFNYANNSFVDGKRSAYLLVYQAPGAN
ALETYENVVATMDQLKKQFPADLDYVVPFEAASVVKVSIEEVLHTLVEALVLVIIVVFLF
LQSWRSTLIPVLAIPVSIIGTFIMFIPLGFTINTLTMFGFVLAIGIVVDDAIVVVEAVEH
NMNERGMNPLDATLAAMREISAPVIAIALILAAVFVPVGFIPGITGRLYQQFAITIAISV
IISAFVALSLTPALCVLLLKPHKRDENSKGLDKFFYKFNTWFDKVTGKYGRGVQSGIKHS
RFVVVILVCIIAGTGLLFAKKPGGFIPTEDEGRIIITFNLPEAASTERTVGTLKAIMKEL
SEVKGIRHYAGLGGLNAVNFSSKSNSGTVFCQLEPWEERKDEELQLQGLIANIQKRMSRF
KEANVVVISPPAIPGLGNTGGFSFVLQEREAGGDIKNFDAQLQNFLNALRKRPEITGAFS
FFTANTPGYELTIDREKAKKLGVSISDIGTALRTYLGSAYVNDFTVYGRNFRVVTQADSM
YRGDISNLGQYYVRNSSGGMVPLSTLTSYKRNESAPLISHYNLFRSAEINGNAAPGYSSG
DAIKALEETAAQSLPAGYGFEFSGLTREEQLAGGQTVYIFALSLTFVFLFLAALYESWSV
PFSVLLAVPLGAFGAILALIFLPKLTNNVYAQIGLITLIGLSAKNAILIIEFAKERVDKG
MPLVDATLEAVRLRLRPIIMTSLAFILGVLPLVFASGAGAQSRQTIGWTVLGGMISATLL
AIFIVPVLYVLITRFAYGKEKLAELEANYKPDEEHGGPKEAGPGEGDHSPAPQPA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaaacctttatccggcgtcccgttacggccattgtcacctccctggtgatt
gtgctggtgggcgtgctggccatcctgaacctgcccgtggggcagtatccggagattacg
ccgcccaccgtatccgtgagcggtacctacaccggcgccgacgcccaaaccgtggagcag
accgtggccacgcccgtggaagtgcaggtgaacggcacgcccggcatgacttacctgcaa
agcaacagcaccagcaacgggcagatgagcatgacggtgaacttcgaggtgggcaccgac
atcaacattgccgccctcgatgtgcagaaccgcgtgggcattgcccagcccacgctgccg
caggaagtgcagcgcctgggcttggtggtgcgcaagcggaaccccagcattctgatgctg
gtggccatgtacgcgcccaaaggcacccacaacaccaccttcctcgacaactacgccaac
gtgttcgtgaaggacgccctgctgcgcaccaagggcgtgggcgacatcgtgagccgcgcc
gacgacttctcgatgcgcgtgtggctcaagcccgataagctcagccagctcggcgtcacg
gcccaggaagtcacggccgccattcaggagcagaacgcccagattgcggccggctccatc
ggcgcgcccccggcccagaccggccagacgtttgagtacatcgtgttcgtgaaaggccgc
ctgaccaacaccgaggagttcggcaacgtcatcgtgaaaacccgccccgacgacggctcg
gtggtgtacctcaaggacgtggcgcggctggagctgggcaagttcaactacgccaacaac
tccttcgtggacggcaaacgctcggcctacctgctcgtgtaccaggcccccggcgccaac
gccctcgaaacctacgaaaacgtggtggcgaccatggaccagctcaaaaagcagttcccc
gccgacctcgattacgtggtgccgtttgaggccgcctcggtcgtgaaagtgtccatcgag
gaagtgctccacacgctggtggaagccctggtgctggtgattatcgtggtgttcctgttc
ctgcagagctggcgctccacgctcattccggtgctagccattccggtgtccatcatcggc
acgttcatcatgttcatcccgctgggcttcaccatcaacacgcttaccatgttcggcttc
gtgctggccatcgggattgtggtcgatgacgctattgtggtggtggaggccgtggagcac
aatatgaacgagcggggcatgaacccgctggatgccacgctggccgccatgcgcgaaatt
tcggccccggttattgccattgccttgattctggcggcggtatttgtcccggtgggcttc
attccgggcatcaccgggcggctgtaccagcagttcgccatcaccattgccatttccgtg
attatctcggctttcgtggccctgtcgctcacgccggcgttgtgcgtgctgctgctcaag
ccccacaagcgcgacgaaaattcgaaaggcctcgacaagttcttctacaagttcaacacc
tggtttgacaaggtcaccggcaagtacggccggggcgtgcaaagcggcatcaagcacagc
cgcttcgtggtcgtgattctggtctgcatcattgccggcaccgggttgctgtttgccaag
aagcccgggggcttcatcccgaccgaggacgaaggccgcatcatcatcaccttcaacctg
cccgaagccgcctccaccgagcgcaccgtgggcacgctgaaagccattatgaaggagctg
agcgaggtgaagggcatccggcactacgccggtctgggcggcctgaacgccgtgaacttc
tcctcgaaatcgaacagcggcaccgtattctgccagctggaaccctgggaagagcgcaag
gacgaggagctgcaattgcagggcctaattgccaacatccagaagcgcatgagccgcttc
aaggaagccaacgtggtggtgatttcgccgccggctattccgggcctgggcaacaccggc
ggcttttccttcgtgctccaggagcgcgaggcgggcggcgacatcaagaacttcgatgcg
cagctgcagaacttcctgaatgcgctgcgcaagcggcccgaaatcaccggagccttctcg
ttcttcaccgccaacacccccggctacgagctgaccattgaccgcgaaaaagccaagaag
ctgggcgtgtccatctccgatatcggcaccgcgctgcgcacctacctgggctcggcctac
gtgaacgacttcacggtgtacggccgcaacttccgcgtggtaacccaggccgacagcatg
taccgcggcgacatcagcaacctgggccagtactacgtgcgcaacagcagcggcggcatg
gtgcccctgagcacgctcaccagctacaagcgcaacgaatcggccccgctcatctcgcac
tacaatctgttccgctcggccgaaatcaacggcaacgcagctcccggctactcctccggt
gacgccatcaaggccctggaggaaacagcggcccagtcgttgccggccggctacggcttc
gagttttcgggcctgacccgcgaggagcagctggccggcggccagacggtgtacatcttc
gccctgtcgctcacgttcgtgttcctgttcctggcggccctgtacgaaagctggtcggtg
cctttctcggtgctgctggccgtgccgctgggcgcattcggggctattctggccctgatt
ttcctgcccaagctcaccaacaacgtctacgcccagattggtctgattacgctcattggt
ttgtcggccaagaacgccattctgattatcgagtttgccaaggagcgggtggataaaggc
atgccgctggtggatgccaccctggaagccgtgcgcctgcgcctccgccccatcatcatg
acctcgctggccttcatcctgggcgtgctgccactggtattcgcctccggcgcgggtgcc
caaagccgccagaccatcggctggacggtgctcggcggcatgatttcggccacgctgctg
gccattttcattgtgccggtgctctacgtgctcatcacccgcttcgcctacggcaaggag
aaactggccgagctggaagccaactacaagcccgacgaagagcacggcggccccaaagaa
gccggccccggcgaaggcgaccattctcccgccccgcaaccggcgtaa
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