Hymenobacter canadensis: O3303_18820
Help
Entry
O3303_18820 CDS
T09156
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_18820
01503 Cationic antimicrobial peptide (CAMP) resistance
O3303_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcw03036
]
O3303_18820
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_18820
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_18820
Chromosome and associated proteins [BR:
hcw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
O3303_18820
Transporters [BR:
hcw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
O3303_18820
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O3303_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND
HH_AAEA_pHBA
Beta-barrel_RND_2
Biotin_lipoyl
HH_EMRA
BSH_CzcB
CzcB_C
HH_YBHG
BSH_YknX
PapC_C
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WBA41848
UniProt:
A0ABY7LN41
LinkDB
All DBs
Position
complement(4397627..4398778)
Genome browser
AA seq
383 aa
AA seq
DB search
MKHTLLRFSFAASLLALASCGKKEDEKAAGPPPATPVTLVAARTADAVYYDEYPATVVAL
NNVELRSQVAGFITQIYFKDGDVVQKGKPLYEIDRRKYQAAYQQALAGVRSAQAVVQNAQ
VNLSRYQRLAQQDAIARQVVDNAQTSYATAQAQVAQAQANVALARTDLDYSVINAPFTGR
IGISQVRLGAQVSPGTTLLNTISAEDPMGVDFVIPDADLSRFADLQRQGGSGQDSTFRLV
LPDGARYAQPGKMLAIDRGVNQQTATIQIRVQFPNSKRDLKDGMSTVLNVLNRQSGRRLV
VPFKAVVEQMGENFVFIAGDSSKAYQRKVQLGPRLRDQIVIMNGIKDGDQVVTEGLNRLR
DGGPITTGAPATAGAGAPASAAK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataccctcctccgcttttccttcgctgccagcctgctggcgttggccagctgc
ggcaagaaagaagacgaaaaagccgccgggccgccgcccgccacacccgtgacgctagta
gccgcccgcaccgccgacgccgtgtactacgacgagtaccccgccaccgtggtggccctc
aacaacgtggagttgcgcagccaggtggccgggttcatcacccagatctacttcaaggac
ggcgacgtggtgcagaagggcaagccgctctatgagattgaccgccgcaagtatcaggcc
gcctaccagcaggccctggccggtgtgcgcagcgcccaggccgtggtgcaaaacgcccag
gtgaacctgagccgctaccagcgcctggcccagcaggatgccattgcccggcaggtggtg
gacaacgcccagaccagctacgccaccgcccaggcccaggtggcccaggcccaggccaac
gtggccctggcccgcaccgacctcgactactccgtgattaacgcgcccttcaccggccgc
atcggcatttcgcaggtgcggctgggggcgcaggtcagccccggcactacgctgctcaac
accatcagcgccgaggacccgatgggcgtggacttcgtgattccggacgccgacctgagc
cgcttcgccgacttgcagcgccagggcggcagcggccaggactccacgttccgcctcgtg
ctgcccgatggcgcgcgctacgcccagcccggcaagatgctggccatcgaccggggcgta
aaccagcaaaccgccaccatccagattcgggtgcagttcccgaactccaagcgcgacctg
aaagacggcatgagcaccgtgctcaacgtgctcaaccggcagtcgggccgccggctggtg
gtgccgtttaaggccgtggtagagcagatgggcgagaacttcgtgttcatcgccggcgac
agcagcaaggcctaccagcgcaaagtgcagctcggcccccgcctccgcgaccaaatcgtc
atcatgaacggcatcaaggacggcgaccaggtagtaaccgaaggcctcaaccgcctccgc
gacggcggcccgattaccaccggcgcgcccgctaccgccggcgccggagccccagccagc
gccgctaagtaa
DBGET
integrated database retrieval system
