Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1777
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Entry
HDEF_1777 CDS
T00911
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00540
Lipopolysaccharide biosynthesis
hde01100
Metabolic pathways
Module
hde_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HDEF_1777 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
HDEF_1777 (lpxC)
Enzymes [BR:
hde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HDEF_1777 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
Lipid A
HDEF_1777 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ACQ68373
UniProt:
C4K730
LinkDB
All DBs
Position
complement(1616842..1617762)
Genome browser
AA seq
306 aa
AA seq
DB search
MIKQKTLKHVVKTTGVGLHTGKKVTLTMRPASANDGIIYRRVDLNPVVEFFADPESVRDT
QLCTCLVNENNIRISTIEHLNSALAAFGIDNVIIEVDAPEVPIMDGSASPFIFLLLNSGI
KELNAPKKFLKLKETIRVQKDDKWAELSPYDGFRLDFSIDFKHPAIHENTQSYGFDFSAQ
TFILELSRARTFGFIKDIEYLQSKGLCLGGSFDCAIVMDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFICGHNIIGAFSAFKSGHALNNQLLKAVLENQSAWEYVTFEHEEAPILFGHSL
EMCFVR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaaaaaacattaaaacatgttgtgaaaacaaccggtgttggcctgcataca
gggaaaaaagtgactcttactatgcgacctgcatcagcaaacgatgggattatttatcgt
cgcgttgatttaaaccccgttgttgaattttttgcagatcctgaatctgtacgtgacacc
cagctttgcacctgcctagtaaatgaaaataatatacgtatttctacgattgaacatctt
aattctgccctcgccgcattcggaatcgataatgtgattatagaagttgatgcgcctgaa
gtgcctattatggatggtagcgccagcccttttatatttttattactaaattcaggcatc
aaagaactcaatgcgccaaaaaaatttttaaaattaaaagaaaccatccgagttcaaaaa
gatgataaatgggccgaattatcgccatatgacggttttcgcttggattttagcattgac
tttaagcatcctgcaattcatgaaaatactcaaagctacggttttgatttttctgcacaa
acttttatccttgagcttagccgtgccagaacttttggttttataaaagatattgaatat
ctgcaatcaaaaggtctctgcttgggtggcagctttgactgcgctattgtgatggatgat
tatcgtgtgctcaatgaagacggtttaaggtttgaagatgaatttgttcgtcataaaatg
ctggatgccatcggtgatttatttatttgcggtcacaacattattggtgctttttctgcc
tttaaatctggccatgcattaaataatcagctattaaaagccgttttagagaatcaatcc
gcttgggagtatgttacttttgagcatgaagaagctcctatcttatttggtcactcgtta
gagatgtgctttgttcgataa
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