Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1887
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Entry
HDEF_1887 CDS
T00911
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00020
Citrate cycle (TCA cycle)
hde00785
Lipoic acid metabolism
hde01100
Metabolic pathways
hde01110
Biosynthesis of secondary metabolites
hde01120
Microbial metabolism in diverse environments
hde01200
Carbon metabolism
hde01210
2-Oxocarboxylic acid metabolism
Module
hde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDEF_1887 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HDEF_1887 (sucA)
Enzymes [BR:
hde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HDEF_1887 (sucA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ACQ68478
UniProt:
C4K7D5
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All DBs
Position
1722017..1724824
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AA seq
935 aa
AA seq
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MQNGLMQAWLNSSYLAGANQSYIEQLYEDFLINPNSVEQSWKTIFEQFSSAETARPLHSE
VRQYCRDLAKNKAGLLSSCNGLDFDSKQVKVFNLMNAFRFQGHQNAHLDPLGLWEREPVP
DLNLAYHDLTESDFENSFNIGSFAIPKKTMTLADLYTALKKTYCGSIGAEYMHINNTEER
LWIQQRIEPIMGQPQFDPEEKRRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALVILL
KELIRHAGQQGMKEVVLGMAHRGRLNVLINVLGKMPQDLFDEFAGKHKEHLGTGDVKYHQ
GFSSDIETEGGLIHLALAFNPSHLEIVSPVVIGSVRARRDRLSDKASNKVFPVTIHGDAA
ITGQGVVQETLNMSRARGYEVGGTVRIVINNQIGFTTSNPQDARSTEYCTDVAKMVQAPI
FHVNADDPEAVAFVARLALDFRNTFKRDFMIDLVCYRRHGHNEADEPSATQPIMYQKIKK
HPTTREIYAQKLIQENIVTQEDATEMVNLYRDALDQGKGVVKEWRPMKPHSFNWQPYLNH
EWDAQYPPNTVKMASLTELAKKISRIPEKIDMQSRVAKIYADRAEMAAGKKPLDWGAAET
LAYATLLDKGISIRLSGEDSGRGTFFHRNAVIYDQKNGSTYVPLENIHQHQGDFKVWDSV
LSEEAVLAFEYGYSTAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNIQVCIPSTPAQVYHMLRRQSLRPMRRPLVVMSP
KSLLRHPLAISSLKELAEGTFLPAIGEMDDLNSDSIKRVVICAGKVYYDLLEQRRKNQQD
NVAIIRIEQLYPFPHQAIKMLFEPYAHVHDFVWCQEEPLNQGAWYCSQHHFREVIPFAAS
LRYAGRPASASPSVGYLSVHQKQQKDLLNDALTME
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgggctaatgcaggcttggttgaattcttcctatctggcaggagctaatcaa
tcctatatagaacaactctacgaagattttttaatcaatcccaattcagtagaacaaagc
tggaaaaccatttttgagcaattttcatccgccgaaacggccagaccattacattcagaa
gttcgtcaatattgtcgagatttagcaaaaaacaaggcgggtttattatcttcctgtaac
ggcttagatttcgattccaagcaagtcaaagtattcaatctgatgaatgcttttcgcttc
cagggccatcaaaacgcgcatttagatcctctcggtttatgggagcgcgaacccgttcct
gatcttaatctagcctatcatgatttaactgaaagtgattttgaaaacagtttcaacatc
ggttcctttgctattccaaaaaaaacaatgacattggcagatttatacactgcattaaag
aagacgtattgcggctcgataggcgccgagtatatgcatatcaacaatactgaagaaagg
ctctggatacagcaacgcatcgaacctatcatggggcagcctcaatttgatcctgaggaa
aaacggcgttttttaagtgaattgacggctgccgagggcttagagcgttatttaggggcc
aaatttccgggagcgaaacgcttttcactcgagggcggcgatgctttggttatcttgctg
aaagaactgattcgtcacgcaggtcagcagggcatgaaagaagtcgttctgggtatggcg
caccgtggtcgtttgaatgtgttgatcaatgtattaggcaaaatgcctcaagatcttttt
gatgaatttgcaggcaaacataaagagcatctcggcacaggggatgtcaaatatcatcaa
ggtttttcctctgatattgaaacagaagggggcctgattcatttggcgttggcgtttaat
ccgtctcatttggaaattgtcagccccgttgtcatcggctctgtacgagcgcgtcgtgat
cgcctcagtgataaagcaagcaataaagtattccccgtcacgatccacggggatgcagca
atcactgggcaaggcgtggtgcaagaaaccttaaatatgtctcgagcccgaggttatgaa
gtgggcggaacagtgcgcatcgtgattaacaatcaaatcggttttaccacctcaaatccc
caagatgcccgctccaccgaatattgcactgatgtcgccaaaatggtacaggcaccgatt
tttcacgtcaatgcggatgacccggaagccgtggcttttgtcgctcgtttggccctggat
tttcgtaacacttttaagcgcgattttatgatcgatttggtgtgctaccgacgacatggc
cacaatgaagcggatgaaccgagcgcgactcaacccatcatgtaccaaaaaatcaaaaaa
catccaacaactcgggaaatctacgcacaaaaattaattcaggaaaatatcgtcactcaa
gaagacgcgaccgaaatggtcaatctttatcgagatgctttagatcagggtaaaggggtg
gtgaaggaatggcgtcccatgaagccccattcttttaattggcagccttaccttaatcat
gaatgggatgctcaatacccccctaatacagttaaaatggcctctttaacagagttggca
aaaaaaatcagtcgtatccctgaaaaaatcgacatgcaatctcgagtcgctaaaatttat
gcagatcgtgcagaaatggccgcagggaagaaacccctcgattggggtgctgccgaaaca
ttagcctacgccaccttgctagataaaggcatttccattcgtttatcgggtgaagattca
gggcgtggcaccttttttcaccggaatgccgtgatttatgatcaaaaaaatggctcaaca
tatgtacctttagaaaacattcaccaacaccaaggtgactttaaggtctgggattcggtt
ttatctgaggaagcagtactggcttttgaatacggttattcgacagcggaacctcgtact
ttaaccatttgggaagcccagtttggtgattttgccaatggtgctcaggtggttatcgat
caatttatcagttctggagagcaaaaatggggtcgtatgtgtggtcttgtgatgttatta
ccacacggctatgaaggccaaggcccagagcactcttcagcacgtttagaacgctatctg
caactttgtgctgagcaaaatatccaggtctgcattccttctacgcctgcacaggtttac
catatgttgcgtcgtcaatcattaagacccatgagacgcccgttggtggtgatgtccccg
aaatcgttgcttcgccatcctttagcgatttcatctcttaaagaattagccgaaggcact
tttttgccggccatcggtgaaatggatgatctaaacagcgattctatcaaacgtgttgtg
atctgtgccggcaaagtgtattacgatctgttagaacaacgtcgtaaaaatcagcaagat
aatgtggcgattattcgtattgagcaactttacccttttccccatcaagcaataaaaatg
ctttttgagccctatgcgcatgtgcatgattttgtttggtgtcaagaagaacctctgaat
caaggggcctggtattgtagtcaacatcattttcgagaggtgatcccttttgctgcttcc
ttacgttatgcgggccggccggcctcagcctctccctctgtgggttatctctcagtgcat
caaaaacaacaaaaagatttgcttaacgacgctttaaccatggaatag
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