Entry
Name
ABC transporters - Hartmannibacter diazotrophicus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Other DBs
Organism
Hartmannibacter diazotrophicus [GN:
hdi ]
Gene
HDIA_0141 yejB; Inner membrane ABC transporter permease protein YejB [KO:K13894 ]
HDIA_0142 yejE; Inner membrane ABC transporter permease protein YejE [KO:K13895 ]
HDIA_0211 ytfQ_1; ABC transporter periplasmic-binding protein YtfQ precursor [KO:K23508 ]
HDIA_0370 tagG; Teichoic acid translocation permease protein TagG [KO:K09690 ]
HDIA_0402 pstC_1; Phosphate transport system permease protein PstC [KO:K02037 ]
HDIA_0403 pstA_1; Phosphate transport system permease protein PstA [KO:K02038 ]
HDIA_0559 pstC_2; Phosphate transport system permease protein PstC [KO:K02037 ]
HDIA_0560 pstA_2; Phosphate transport system permease protein PstA [KO:K02038 ]
HDIA_0642 amiC_2; Aliphatic amidase expression-regulating protein [KO:K11959 ]
HDIA_0645 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
HDIA_0656 mglA_1; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
HDIA_0675 phnV; putative 2-aminoethylphosphonate transport system permease protein PhnV [KO:K02011 ]
HDIA_0676 phnS2; putative 2-aminoethylphosphonate-binding periplasmic protein precursor [KO:K02012 ]
HDIA_0691 ugpC_1; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
HDIA_0857 rbsC_1; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_0858 rbsB_1; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_0907 xylF_1; D-xylose-binding periplasmic protein precursor [KO:K10543 ]
HDIA_0908 xylH_1; Xylose transport system permease protein XylH [KO:K10544 ]
HDIA_0936 potF_1; Putrescine-binding periplasmic protein precursor [KO:K11073 ]
HDIA_0938 potH_1; Putrescine transport system permease protein PotH [KO:K11075 ]
HDIA_0939 ydcV_1; Inner membrane ABC transporter permease protein YdcV [KO:K11074 ]
HDIA_0944 modB_1; Molybdenum transport system permease protein ModB [KO:K02011 ]
HDIA_0995 bioN; Energy-coupling factor transporter transmembrane protein BioN [KO:K16783 ]
HDIA_0996 bioM; Biotin transport ATP-binding protein BioM [KO:K16784 ] [EC:7.6.2.-]
HDIA_1021 bacA_1; Vitamin B12 transport ATP-binding protein BacA [KO:K02471 ]
HDIA_1069 bacA_2; Vitamin B12 transport ATP-binding protein BacA [KO:K02471 ]
HDIA_1390 lolE_1; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808 ]
HDIA_1391 lolD_1; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
HDIA_1420 rbsC_2; Ribose transport system permease protein RbsC [KO:K17214 ]
HDIA_1581 rbsB_2; D-ribose-binding periplasmic protein precursor [KO:K10552 ]
HDIA_1582 rbsC_3; Ribose transport system permease protein RbsC [KO:K10553 ]
HDIA_1738 rbsC_4; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_1739 rbsC_5; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_1741 ytfQ_2; ABC transporter periplasmic-binding protein YtfQ precursor [KO:K10439 ]
HDIA_1760 cysW_1; Sulfate transport system permease protein CysW [KO:K05773 ]
HDIA_1785 rbsC_6; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_1787 rbsB_3; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_1797 aapJ; General L-amino acid-binding periplasmic protein AapJ precursor [KO:K09969 ]
HDIA_1798 glnM_1; putative glutamine ABC transporter permease protein GlnM [KO:K09970 ]
HDIA_1799 yhdY; Inner membrane amino-acid ABC transporter permease protein YhdY [KO:K09971 ]
HDIA_1858 cysW_2; Sulfate transport system permease protein CysW [KO:K02047 ]
HDIA_1859 cysT_1; Sulfate transport system permease protein CysT [KO:K02046 ]
HDIA_1954 prsD_1; Type I secretion system ATP-binding protein PrsD [KO:K12536 ]
HDIA_2102 amiC_4; Aliphatic amidase expression-regulating protein [KO:K11959 ]
HDIA_2105 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
HDIA_2129 hisJ; Histidine-binding periplasmic protein precursor [KO:K10022 ]
HDIA_2130 argT; Lysine-arginine-ornithine-binding periplasmic protein precursor [KO:K10022 ]
HDIA_2131 occQ; Octopine transport system permease protein OccQ [KO:K10024 ]
HDIA_2132 occM_2; Octopine transport system permease protein OccM [KO:K10023 ]
HDIA_2140 ugpC_2; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
HDIA_2141 sugC_1; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
HDIA_2159 rbsB_4; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_2160 rbsC_7; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_2161 rbsC_8; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_2165 amiC_5; Aliphatic amidase expression-regulating protein [KO:K11959 ]
HDIA_2168 cysA_3; Sulfate/thiosulfate import ATP-binding protein CysA [KO:K11962 ]
HDIA_2178 amiC_6; Aliphatic amidase expression-regulating protein [KO:K11959 ]
HDIA_2181 amiC_7; Aliphatic amidase expression-regulating protein [KO:K01999 ]
HDIA_2365 cmpB_2; Bicarbonate transport system permease protein CmpB [KO:K15577 ]
HDIA_2422 lptG; Lipopolysaccharide export system permease protein LptG [KO:K11720 ]
HDIA_2566 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
HDIA_2567 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
HDIA_2570 yxeO; putative amino-acid import ATP-binding protein YxeO [KO:K01995 ]
HDIA_2714 mlaE; putative phospholipid ABC transporter permease protein MlaE [KO:K02066 ]
HDIA_2740 ddpF; putative D,D-dipeptide transport ATP-binding protein DdpF [KO:K12372 ]
HDIA_2741 oppD3; Oligopeptide transport ATP-binding protein OppD [KO:K12371 ]
HDIA_2742 dppC_1; Dipeptide transport system permease protein DppC [KO:K12370 ]
HDIA_2743 dppB_2; Dipeptide transport system permease protein DppB [KO:K12369 ]
HDIA_3080 amiC_9; Aliphatic amidase expression-regulating protein [KO:K11959 ]
HDIA_3083 lptB_4; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
HDIA_3092 ssuC_6; putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
HDIA_3094 ssuA_2; putative aliphatic sulfonates-binding protein precursor [KO:K15553 ]
HDIA_3118 rbsB_5; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_3119 rbsC_9; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_3137 fhuB; Iron(III)-hydroxamate import system permease protein FhuB [KO:K23228 ]
HDIA_3205 cmpB_3; Bicarbonate transport system permease protein CmpB [KO:K15577 ]
HDIA_3216 potD_3; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
HDIA_3217 potB_3; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
HDIA_3245 ugpC_3; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
HDIA_3247 malK_2; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
HDIA_3254 araQ; L-arabinose transport system permease protein AraQ [KO:K05815 ]
HDIA_3255 ugpA_1; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K05814 ]
HDIA_3256 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor [KO:K05813 ]
HDIA_3279 potD_4; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
HDIA_3281 potH_2; Putrescine transport system permease protein PotH [KO:K11071 ]
HDIA_3282 ydcV_5; Inner membrane ABC transporter permease protein YdcV [KO:K11070 ]
HDIA_3321 malK_3; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
HDIA_3322 sugC_2; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
HDIA_3360 modB_2; Molybdenum transport system permease protein ModB [KO:K02018 ]
HDIA_3361 modA; Molybdate-binding periplasmic protein precursor [KO:K02020 ]
HDIA_3389 mglA_4; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
HDIA_3583 ssuC_14; putative aliphatic sulfonates transport permease protein SsuC [KO:K15599 ]
HDIA_3622 yfeA2; Periplasmic chelated iron-binding protein YfeA [KO:K11604 ]
HDIA_3623 yfeB; Chelated iron transport system membrane protein YfeB [KO:K11607 ]
HDIA_3624 yfeC; Chelated iron transport system membrane protein YfeC [KO:K11605 ]
HDIA_3625 yfeD; Chelated iron transport system membrane protein YfeD [KO:K11606 ]
HDIA_3728 rbsA_9; Ribose import ATP-binding protein RbsA [KO:K10562 ] [EC:7.5.2.-]
HDIA_3729 rbsC_10; Ribose transport system permease protein RbsC [KO:K10560 ]
HDIA_3730 lsrD; Autoinducer 2 import system permease protein LsrD [KO:K10561 ]
HDIA_3743 rbsC_11; Ribose transport system permease protein RbsC [KO:K10440 ]
HDIA_3746 rbsB_6; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_3747 rbsB_7; D-ribose-binding periplasmic protein precursor [KO:K10439 ]
HDIA_3823 malK_5; Maltose/maltodextrin import ATP-binding protein MalK [KO:K17324 ]
HDIA_3825 ugpA_2; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K17322 ]
HDIA_3826 sugB_6; Trehalose transport system permease protein SugB [KO:K17323 ]
HDIA_3832 sugA_5; Trehalose transport system permease protein SugA [KO:K10237 ]
HDIA_3833 sugB_7; Trehalose transport system permease protein SugB [KO:K10238 ]
HDIA_3835 malK_6; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10235 ]
HDIA_4264 prsD_2; Type I secretion system ATP-binding protein PrsD [KO:K12536 ]
HDIA_4306 drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA [KO:K01995 ]
HDIA_4394 amiC_10; Aliphatic amidase expression-regulating protein [KO:K01999 ]
HDIA_4427 potB_4; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
HDIA_4428 ydcV_7; Inner membrane ABC transporter permease protein YdcV [KO:K11070 ]
HDIA_4477 ugpC_5; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
HDIA_4482 opuAB_1; Glycine betaine transport system permease protein OpuAB [KO:K02001 ]
HDIA_4535 opuAC1; glycine betaine transporter periplasmic subunit [KO:K02002 ]
HDIA_4536 opuAB_2; Glycine betaine transport system permease protein OpuAB [KO:K02001 ]
HDIA_4565 sugA_7; Trehalose transport system permease protein SugA [KO:K10228 ]
HDIA_4566 ycjP_2; Inner membrane ABC transporter permease protein YcjP [KO:K10229 ]
HDIA_4567 malK_7; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
HDIA_4572 opuAC2; Glycine betaine-binding protein OpuAC precursor [KO:K02002 ]
HDIA_4622 xylH_2; Xylose transport system permease protein XylH [KO:K10547 ]
HDIA_4623 xylG_3; Xylose import ATP-binding protein XylG [KO:K10548 ] [EC:7.5.2.-]
HDIA_4624 chvE; Multiple sugar-binding periplasmic receptor ChvE precursor [KO:K10546 ]
HDIA_4708 opuAB_3; Glycine betaine transport system permease protein OpuAB [KO:K02001 ]
HDIA_4709 gbuC; Glycine betaine/carnitine transport binding protein GbuC precursor [KO:K02002 ]
HDIA_4790 lolD_3; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
HDIA_4791 lolE_2; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808 ]
HDIA_4819 prsD_3; Type I secretion system ATP-binding protein PrsD [KO:K12536 ]
HDIA_P0056 ycjP_3; Inner membrane ABC transporter permease protein YcjP [KO:K10229 ]
HDIA_P0057 malK_8; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway