Hyphomicrobium denitrificans 1NES1: HYPDE_30683
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Entry
HYPDE_30683 CDS
T02646
Name
(GenBank) radical SAM protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00790
Folate biosynthesis
hdt01100
Metabolic pathways
Module
hdt_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
HYPDE_30683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdt03016
]
HYPDE_30683
Enzymes [BR:
hdt01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
HYPDE_30683
Transfer RNA biogenesis [BR:
hdt03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HYPDE_30683
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AGK57811
UniProt:
N0BB95
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All DBs
Position
1618777..1619403
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AA seq
208 aa
AA seq
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MYSVKEIFYTLQGEGANAGRPAVFCRFAGCNLWTGREADRAKAICQFCDTDFVGTDGDGG
GRFQAADAVARACRAACLSDGEMLVVLTGGEPMLQVDQELVDALHASGFTVAIETNGTLP
VLDTIDWICVSPKAGSELKQRHGQELKLVYPQDGIDPAQYLDLAFEQRFLQPMDGPQREA
NTQAAVAYCKANPAWRLSLQTHKLLGIP
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtattccgtcaaggaaattttctacactctccagggggaaggcgcgaacgctggccgg
ccggccgtattttgccggttcgcgggctgcaacctgtggaccggccgtgaggcggatcgg
gcgaaggccatctgccaattctgcgatacggattttgtcggcaccgacggagacgggggc
ggccgctttcaggcggcagacgctgtggcgcgagcgtgccgagccgcctgtctgtcggat
ggcgaaatgctggttgtgctgaccggcggcgaaccaatgctgcaggtcgaccaagaactg
gtggacgctctccacgcgagcggttttacggtcgcgatcgagaccaacggcaccctgcct
gtgctcgacacgatcgactggatctgcgtctcgcccaaagccgggtcggaactgaagcaa
aggcacggccaggaactgaagctcgtctatccgcaagacggtatcgatccggctcagtac
cttgacctcgcattcgagcaacggttcctgcaaccgatggacgggccacaacgcgaagcc
aatacgcaggcagcggtggcctattgcaaggcaaacccggcctggaggttgtcactgcag
acccacaagttgctcggtattccttaa
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