Hyphomicrobium denitrificans 1NES1: HYPDE_38123
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Entry
HYPDE_38123 CDS
T02646
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt01501
beta-Lactam resistance
hdt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPDE_38123
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPDE_38123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hdt03036
]
HYPDE_38123
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdt02000
]
HYPDE_38123
01504 Antimicrobial resistance genes [BR:
hdt01504
]
HYPDE_38123
Chromosome and associated proteins [BR:
hdt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HYPDE_38123
Transporters [BR:
hdt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HYPDE_38123
Antimicrobial resistance genes [BR:
hdt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYPDE_38123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
Biotin_lipoyl
DUF4407
SurA_N
PYNP_C
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AGK59296
UniProt:
N0BFQ2
LinkDB
All DBs
Position
3092990..3094204
Genome browser
AA seq
404 aa
AA seq
DB search
MSFGKFITTLAVVGAVAGAGYIFTEKSHTAAIQAARLEAAKPTVAPAITVSKVTTNDFVE
TAVVSGSLIPREEILVSPEIEGLRVLELLADEGDRVKKGQVLARLVSEQIDAQLAQNQAN
LARSNAAIAQAESQIAQAEAQAKEAAAQLERAEPLKKSGYLSGSTYDQRESAARTTAAQL
VAARDGLTAAKAEKAQVEAQGRELLWRRSNTDVTAPQDGVISRRTARMGALASSVGEPMF
RIIQNGEIELDAEIVETELKNVKIGQKAIVSVPQIGDFEGKVRLVSPEVDKTTRLGRVKV
FLGSNPQLRIGTYAHGLIETAHSRGLGVPTSAVTFDQGSTYVQAVSANKVKKQTIQIGLI
SGDLIEVKEGLHEGDLVVTRAGTFLRDGDVVRPVMPEAKLSEAR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggaaaattcataactacgcttgccgtggttggagcggttgcgggcgccgga
tacatcttcaccgaaaagagccatacggccgctatccaggcagcgcgattggaggctgcg
aagccgactgtcgctccggcaatcacggtttccaaagtgacaacgaatgatttcgtcgaa
acggccgtcgtttccggctcactcattccgcgtgaagagattcttgtttcgccggagatt
gaaggcttacgcgtgctcgaactcctggcggacgaaggcgatcgcgtaaagaaaggtcag
gttctggcgcggctcgtctccgaacagatcgacgcgcagcttgcccagaaccaagcgaac
ctcgcacgttcgaacgccgcgatcgcacaggcggaaagtcagatcgcgcaggccgaagcg
caagccaaagaggctgccgcgcagctcgaacgtgccgagcctttgaagaaatccggctat
ctttcaggttccacatacgatcagcgcgagagtgccgcacgtacgaccgcagcccagctc
gtcgccgcacgtgatggactgacagctgctaaagccgagaaggcacaagtcgaagctcag
ggccgcgagcttctgtggcggcgaagcaatacggacgtgactgctccccaggacggcgtc
atcagccgccgtaccgcacgcatgggcgcgctcgcatcgtcggtcggcgagccgatgttc
cgcatcatccagaacggcgaaatcgaactcgatgccgagatcgtcgagaccgagttgaag
aacgtcaagatcggccaaaaagccatcgtaagcgtgccgcagatcggcgacttcgaggga
aaggtacggctcgtttcgccggaggtcgacaagacgacgcgtctcgggcgcgtgaaagtt
ttcctgggatccaatccgcaactcaggatcggaacttatgcacacggtctcatcgagaca
gcgcatagccgcggccttggcgtgccgacgtcggctgtgacattcgatcagggctccaca
tacgtacaggctgtcagcgccaataaggtcaaaaagcaaacgatccagattgggctgatc
agcggcgacctcatcgaagtcaaggaaggcctccacgagggcgatctggtcgtgacacgt
gccggcacgtttctccgcgatggtgatgtcgtgcgtccggtcatgcccgaagccaagctg
agcgaggcccgctga
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