Hyphomicrobium denitrificans 1NES1: HYPDE_38943
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Entry
HYPDE_38943 CDS
T02646
Name
(GenBank) Citryl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00630
Glyoxylate and dicarboxylate metabolism
hdt00660
C5-Branched dibasic acid metabolism
hdt00680
Methane metabolism
hdt00720
Other carbon fixation pathways
hdt01100
Metabolic pathways
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYPDE_38943
00660 C5-Branched dibasic acid metabolism
HYPDE_38943
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPDE_38943
00680 Methane metabolism
HYPDE_38943
Enzymes [BR:
hdt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
HYPDE_38943
4.1.3.25 (S)-citramalyl-CoA lyase
HYPDE_38943
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Gene cluster
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Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AGK59458
UniProt:
N0B8U3
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Position
complement(3248388..3249350)
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AA seq
320 aa
AA seq
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MSYTLYPNRKQRLQRSYLAVPGSNPSMIDRAIKSAADYVFLDCEDAVAPPEKEQARKNII
QALNDLDWKGAGKSVSVRINGLDTHYMYRDVVDIVEQAGAKLDTILIPKVGVPADIYTVE
CIVSQIEVAKGLPHQIGTEALIETPLGMANVEAIASANSRLESMHFGVADYSAFNKARTV
VIGGLNPDYPGDQWHFPLSRMTVACRAFGLRPIDGPFGGIDDPEGYKAAARRGAALGMEG
KWAIHPSQIDLANEIFSPTAKEIERAERILVALKEAEAQGKGAASLDGKMIDAASEKMAK
NLLVTAAAIKAGEAARAASK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagctataccctctacccgaaccgcaagcagcgtctgcagcgctcctacctcgccgtg
ccgggctcaaatccgagcatgatcgatcgcgccatcaagagcgcggcggactatgtcttc
ctcgattgcgaagatgctgtcgcgccgccggagaaagagcaggcccgcaagaacatcatc
caggcgctgaacgatcttgactggaagggcgcaggcaaaagcgtctcggttcgcatcaac
ggcctcgatacccactacatgtatcgcgacgtcgtcgacatcgtcgaacaggcaggcgcg
aagctcgacacgatcctcattccaaaggtcggcgttccggccgacatctacacggttgag
tgcatcgtcagccagatcgaagtcgccaaaggccttccgcaccagatcggcaccgaagcc
ctgattgaaacgccgcttggcatggccaacgtggaagccatcgcatcggccaacagccgt
ctggaatcgatgcacttcggcgtcgccgactattccgccttcaacaaggcccgcaccgtc
gttatcggcggtctgaatcccgattatccgggcgatcagtggcacttcccgctgtcgcgc
atgaccgttgcctgccgtgctttcggccttcgtccgatcgacgggccgttcggcggcatc
gacgatccggaaggctacaaggccgccgcgcgccgtggcgctgctcttggcatggaaggc
aagtgggccatccacccgtcgcagatcgacctcgccaacgagatcttctctccgacggct
aaggaaatcgaacgcgcagagcgcattcttgtcgctctcaaggaagctgaagcgcagggc
aagggcgcggcatcgctcgatggcaagatgatcgacgctgcatctgagaagatggccaag
aaccttctggtcactgcggccgccatcaaggctggcgaagcagcccgcgcggcgagcaaa
taa
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